{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"diamond\", bioproject = \"PRJNA1065838\" and tax_phylum = \"Bacillota\"", "rows": [[2730511, "PRJNA1065838_S_NODE_19063_length_205_cov_1.301282_g18961_i0", "PRJNA1065838", "19063", "205", "1.301282", "2.6676281", "Bacillus thuringiensis", "1428", "Bacteria", "Bacteria", "112", "1.97e-29", "", "NR", "WP_400136190.1", "1428", "g18961", "i0", "94.8", "1.69756097560976", "58", "3", "84.9", "0", "203", "30", "55", "112", "WP_400136190.1 hypothetical protein [Bacillus thuringiensis]", "diamond", "348", "112", "1", "Bacteria", null, "Bacillati", "Bacillota", "Bacilli", "Bacillales", "Bacillaceae", "Bacillus", "Bacillus thuringiensis"], [14208842, "PRJNA1065838_S_NODE_6192_length_299_cov_1.648000_g6090_i0", "PRJNA1065838", "6192", "299", "1.648", "4.92752", "Bacteria", "2", "Bacteria", "Bacteria", "173", "1.78e-53", "", "NR", "WP_148842497.1", "1314", "g6090", "i0", "97.8", 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"PRJNA1065838_S_NODE_16744_length_212_cov_1.276074_g16642_i0", "PRJNA1065838", "16744", "212", "1.276074", "2.70527688", "Bacillus thuringiensis", "1428", "Bacteria", "Bacteria", "60.1", "5.26e-9", "", "NR", "WP_400136190.1", "1428", "g16642", "i0", "100", "0.438679245283019", "31", "0", "43.9", "0", "210", "118", "152", "182", "WP_400136190.1 hypothetical protein [Bacillus thuringiensis]", "diamond", "93", "60.1", "1", "Bacteria", null, "Bacillati", "Bacillota", "Bacilli", "Bacillales", "Bacillaceae", "Bacillus", "Bacillus thuringiensis"], [28109267, "PRJNA1065838_S_NODE_23365_length_193_cov_1.062500_g23263_i0", "PRJNA1065838", "23365", "193", "1.0625", "2.050625", "Bacillus mobilis", "2026190", "Bacteria", "Bacteria", "95.5", "4.82e-21", "", "NR", "WP_400830793.1", "2026190", "g23263", "i0", "63.5", "4.83419689119171", "63", "23", "97.9", "0", "3", "191", "433", "495", "WP_400830793.1 reverse transcriptase domain-containing protein [Bacillus mobilis]", "diamond", "933", "95.5", "1", "Bacteria", null, "Bacillati", "Bacillota", "Bacilli", "Bacillales", "Bacillaceae", "Bacillus", "Bacillus mobilis"], [28583179, "PRJNA1065838_S_NODE_27527_length_180_cov_1.190840_g27425_i0", "PRJNA1065838", "27527", "180", "1.19084", "2.143512", "Listeria monocytogenes", "1639", "Bacteria", "Bacteria", "123", "5.46e-35", "", "NR", "MBN9981007.1", "1639", "g27425", "i0", "100", "1", "60", "0", "100", "0", "1", "180", "1", "60", "MBN9981007.1 hypothetical protein [Listeria monocytogenes]", "diamond", "180", "123", "1", "Bacteria", null, "Bacillati", "Bacillota", "Bacilli", "Bacillales", "Listeriaceae", "Listeria", "Listeria monocytogenes"], [28646268, "PRJNA1065838_S_NODE_27867_length_179_cov_1.200000_g27765_i0", "PRJNA1065838", "27867", "179", "1.2", "2.148", "Geobacillus thermoleovorans", "33941", "Bacteria", "Bacteria", "107", "5.1e-29", "", "NR", "WP_367164894.1", "33941", "g27765", "i0", "100", "0.854748603351955", "51", "0", "85.5", "0", "25", "177", "1", "51", "WP_367164894.1 hypothetical protein, partial [Geobacillus thermoleovorans]", "diamond", "153", "107", "1", "Bacteria", null, "Bacillati", "Bacillota", "Bacilli", "Bacillales", "Anoxybacillaceae", "Geobacillus", "Geobacillus thermoleovorans"], [29080003, "PRJNA1065838_S_NODE_36208_length_162_cov_0.920354_g36106_i0", "PRJNA1065838", "36208", "162", "0.920354", "1.49097348", "Bacteria", "2", "Bacteria", "Bacteria", "117", "1.2199999999999999e-32", "", "NR", "MBN9926981.1", "1639", "g36106", "i0", "98.1", "1.96296296296296", "53", "1", "98.1", "0", "3", "161", "23", "75", "MBN9926981.1 hypothetical protein [Listeria monocytogenes]", "diamond", "318", "117", "1", "Bacteria", null, "Bacillati", "Bacillota", "Bacilli", "Bacillales", "Listeriaceae", "Listeria", "Listeria monocytogenes"], [29592987, "PRJNA1065838_S_NODE_19710_length_203_cov_1.012987_g19608_i0", "PRJNA1065838", "19710", "203", "1.012987", "2.05636361", "Listeria monocytogenes", "1639", "Bacteria", "Bacteria", "73.2", "1.74e-15", "", "NR", "MCH3092978.1", "1639", "g19608", "i0", "100", "0.502463054187192", "34", "0", "50.2", "0", "201", "100", "15", "48", "MCH3092978.1 hypothetical protein [Listeria monocytogenes]", "diamond", "102", "73.2", "1", "Bacteria", null, "Bacillati", "Bacillota", "Bacilli", "Bacillales", "Listeriaceae", "Listeria", "Listeria monocytogenes"], [30004034, "PRJNA1065838_S_NODE_31131_length_170_cov_1.289256_g31029_i0", "PRJNA1065838", "31131", "170", "1.289256", "2.1917352", "Bacillus thuringiensis", "1428", "Bacteria", "Bacteria", "76.3", "1.56e-14", "", "NR", "WP_400136196.1", "1428", "g31029", "i0", "97.3", "0.652941176470588", "37", "1", "65.3", "0", "169", "59", "325", "361", "WP_400136196.1 glycosyltransferase family 4 protein [Bacillus thuringiensis]", "diamond", "111", "76.3", "1", "Bacteria", null, "Bacillati", "Bacillota", "Bacilli", "Bacillales", "Bacillaceae", "Bacillus", "Bacillus thuringiensis"], [30098595, "PRJNA1065838_S_NODE_29232_length_175_cov_1.238095_g29130_i0", "PRJNA1065838", "29232", "175", "1.238095", "2.16666625", "Lactobacillus crispatus", "47770", "Bacteria", "Bacteria", "50.4", "6.6e-6", "", "NR", "TDN29012.1", "47770", "g29130", "i0", "96.4", "0.48", "28", "1", "48", "0", "90", "173", "1", "28", "TDN29012.1 polysaccharide transporter, partial [Lactobacillus crispatus]", "diamond", "84", "50.4", "1", "Bacteria", null, "Bacillati", "Bacillota", "Bacilli", "Lactobacillales", "Lactobacillaceae", "Lactobacillus", "Lactobacillus crispatus"], [30216731, "PRJNA1065838_S_NODE_28872_length_176_cov_1.228346_g28770_i0", "PRJNA1065838", "28872", "176", "1.228346", "2.16188896", "Bacteria", "2", "Bacteria", "Bacteria", "64.3", "4.91e-12", "", "NR", "WP_409352355.1", "1352", "g28770", "i0", "90", "1.36363636363636", "40", "4", "68.2", "0", "2", "121", "19", "58", "WP_409352355.1 pyrroline-5-carboxylate reductase dimerization domain-containing protein, partial [Enterococcus faecium]", "diamond", "240", "64.3", "1", "Bacteria", null, "Bacillati", "Bacillota", "Bacilli", "Lactobacillales", "Enterococcaceae", "Enterococcus", "Enterococcus faecium"], [30635661, "PRJNA1065838_S_NODE_31693_length_169_cov_0.866667_g31591_i0", "PRJNA1065838", "31693", "169", "0.866667", "1.46466723", "Thermicanus aegyptius", "94009", "Bacteria", "Bacteria", "74.7", "6.77e-14", "", "NR", "WP_028986370.1", "94009", "g31591", "i0", "70.4", "0.958579881656805", "54", "16", "95.9", "0", "6", "167", "280", "333", "WP_028986370.1 RNA polymerase factor sigma-54 [Thermicanus aegyptius]", "diamond", "162", "74.7", "1", "Bacteria", null, "Bacillati", "Bacillota", "Bacilli", "Bacillales", "Bacillales Family X. Incertae Sedis", "Thermicanus", "Thermicanus aegyptius"], [31584324, "PRJNA1065838_S_NODE_34416_length_165_cov_0.879310_g34314_i0", "PRJNA1065838", "34416", "165", "0.87931", "1.4508615", "Saccharibacillus deserti", "1634444", "Bacteria", "Bacteria", "105", "8.17e-25", "", "NR", "WP_172255376.1", "1634444", "g34314", "i0", "98.2", "1", "55", "1", "100", "0", "1", "165", "202", "256", "WP_172255376.1 peptide chain release factor 3 [Saccharibacillus deserti]", "diamond", "165", "105", "1", "Bacteria", null, "Bacillati", "Bacillota", "Bacilli", "Bacillales", "Paenibacillaceae", "Saccharibacillus", "Saccharibacillus deserti"], [31836964, "PRJNA1065838_S_NODE_2737_length_413_cov_1.571429_g2635_i0", "PRJNA1065838", "2737", "413", "1.571429", "6.49000177", "Bacillus thuringiensis", "1428", "Bacteria", "Bacteria", "271", "2.75e-88", "", "NR", "WP_400136196.1", "1428", "g2635", "i0", "97.8", "0.995157384987893", "137", "3", "99.5", "0", "3", "413", "137", "273", "WP_400136196.1 glycosyltransferase family 4 protein [Bacillus thuringiensis]", "diamond", "411", "271", "1", "Bacteria", null, "Bacillati", "Bacillota", "Bacilli", "Bacillales", "Bacillaceae", "Bacillus", "Bacillus thuringiensis"], [31868664, "PRJNA1065838_S_NODE_33597_length_166_cov_0.888889_g33495_i0", "PRJNA1065838", "33597", "166", "0.888889", "1.47555574", "Staphylococcus epidermidis", "1282", "Bacteria", "Bacteria", "66.2", "9.57e-13", "", "NR", "PIH42955.1", "1282", "g33495", "i0", "90.9", "0.596385542168675", "33", "3", "59.6", "0", "22", "120", "1", "33", "PIH42955.1 hypothetical protein CTJ01_13190, partial [Staphylococcus epidermidis]", "diamond", "99", "66.2", "1", "Bacteria", null, "Bacillati", "Bacillota", "Bacilli", "Bacillales", "Staphylococcaceae", "Staphylococcus", "Staphylococcus epidermidis"], [32312063, "PRJNA1065838_S_NODE_33399_length_166_cov_1.333333_g33297_i0", "PRJNA1065838", "33399", "166", "1.333333", "2.21333278", "Listeria monocytogenes", "1639", "Bacteria", "Bacteria", "60.1", "2.13e-10", "", "NR", "MCH3113139.1", "1639", "g33297", "i0", "93.8", "0.578313253012048", "32", "2", "57.8", "0", "21", "116", "30", "61", "MCH3113139.1 hypothetical protein [Listeria monocytogenes]", "diamond", "96", "60.1", "1", "Bacteria", null, "Bacillati", "Bacillota", "Bacilli", "Bacillales", "Listeriaceae", "Listeria", "Listeria monocytogenes"], [32525308, "PRJNA1065838_S_NODE_32359_length_168_cov_0.873950_g32257_i0", "PRJNA1065838", "32359", "168", "0.87395", "1.468236", "Bacteria", "2", "Bacteria", "Bacteria", "58.2", "1.17e-9", "", "NR", "MCH3005797.1", "1639", "g32257", "i0", "100", "2", "28", "0", "50", "0", "166", "83", "30", "57", "MCH3005797.1 DUF4337 domain-containing protein [Listeria monocytogenes]", "diamond", "336", "58.2", "1", "Bacteria", null, "Bacillati", "Bacillota", "Bacilli", "Bacillales", "Listeriaceae", "Listeria", "Listeria monocytogenes"]], "truncated": false, "filtered_table_rows_count": 20, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "diamond", "p1": "PRJNA1065838", "p2": "Bacillota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1065838&tax_phylum=Bacillota", "results": [{"value": "PRJNA1065838", "label": "PRJNA1065838", "count": 20, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&tax_phylum=Bacillota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1065838&tax_phylum=Bacillota", "results": [{"value": "diamond", "label": "diamond", "count": 20, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1065838&tax_phylum=Bacillota", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1065838&tax_phylum=Bacillota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 20, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1065838&tax_phylum=Bacillota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1065838&tax_phylum=Bacillota", "results": [], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1065838&tax_phylum=Bacillota", "results": [{"value": "Bacillati", "label": "Bacillati", "count": 20, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1065838&tax_phylum=Bacillota&tax_kingdom=Bacillati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1065838&tax_phylum=Bacillota", "results": [{"value": "Bacillota", "label": "Bacillota", "count": 20, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1065838", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 299.55176300063613}