{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"diamond\", bioproject = \"PRJNA1065838\" and tax_phylum = \"Actinomycetota\"", "rows": [[10383382, "PRJNA1065838_S_NODE_33589_length_166_cov_0.888889_g33487_i0", "PRJNA1065838", "33589", "166", "0.888889", "1.47555574", "Actinomycetota bacterium", "2900548", "Bacteria", "Bacteria", "94.4", "3.2e-21", "", "NR", "MDP9480559.1", "2900548", "g33487", "i0", "88.5", "0.939759036144578", "52", "6", "94", "0", "6", "161", "133", "184", "MDP9480559.1 DUF2723 domain-containing protein [Actinomycetota bacterium]", "diamond", "156", "94.4", "1", "Bacteria", null, "Bacillati", "Actinomycetota", null, null, null, null, "Actinomycetota bacterium"], [27477912, "PRJNA1065838_S_NODE_18983_length_205_cov_2.019231_g18881_i0", "PRJNA1065838", "18983", "205", "2.019231", "4.13942355", "Actinomycetota bacterium", "2900548", "Bacteria", "Bacteria", "41.6", "0.0321", "", "NR", "MEM9711618.1", "2900548", "g18881", "i0", "46.3", "0.6", "41", "22", "60", "0", "66", "188", "72", "112", "MEM9711618.1 SRPBCC family protein [Actinomycetota bacterium]", "diamond", "123", "41.6", "1", "Bacteria", null, "Bacillati", "Actinomycetota", null, null, null, null, "Actinomycetota bacterium"], [27541191, "PRJNA1065838_S_NODE_23764_length_192_cov_1.041958_g23662_i0", "PRJNA1065838", "23764", "192", "1.041958", "2.00055936", "Ilumatobacteraceae bacterium", "2497619", "Bacteria", "Bacteria", "43.9", "0.00734", "", "NR", "MET0661992.1", "2497619", "g23662", "i0", "44.7", "0.59375", "38", "21", "59.4", "0", "56", "169", "106", "143", "MET0661992.1 hypothetical protein [Ilumatobacteraceae bacterium]", "diamond", "114", "43.9", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Acidimicrobiia", "Acidimicrobiales", "Ilumatobacteraceae", null, "Ilumatobacteraceae bacterium"], [28203930, "PRJNA1065838_S_NODE_33526_length_166_cov_0.888889_g33424_i0", "PRJNA1065838", "33526", "166", "0.888889", "1.47555574", "Solirubrobacteraceae bacterium", "2586742", "Bacteria", "Bacteria", "54.7", "2.36e-7", "", "NR", "MDX6679988.1", "2586742", "g33424", "i0", "42.3", "0.939759036144578", "52", "30", "94", "0", "158", "3", "55", "106", "MDX6679988.1 hypothetical protein [Solirubrobacteraceae bacterium]", "diamond", "156", "54.7", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Thermoleophilia", "Solirubrobacterales", "Solirubrobacteraceae", null, "Solirubrobacteraceae bacterium"], [28456866, "PRJNA1065838_S_NODE_8786_length_260_cov_1.417062_g8684_i0", "PRJNA1065838", "8786", "260", "1.417062", "3.6843612", "Mycobacterium tuberculosis", "1773", "Bacteria", "Bacteria", "143", "5.669999999999999e-42", "", "NR", "WP_214608624.1", "1773", "g8684", "i0", "98.7", "0.9", "78", "1", "90", "0", "258", "25", "47", "124", "WP_214608624.1 hypothetical protein, partial [Mycobacterium tuberculosis]", "diamond", "234", "143", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Mycobacteriales", "Mycobacteriaceae", "Mycobacterium", "Mycobacterium tuberculosis"], [28930393, "PRJNA1065838_S_NODE_31828_length_169_cov_0.866667_g31726_i0", "PRJNA1065838", "31828", "169", "0.866667", "1.46466723", "Mycobacterium sp. UM_WGJ", "1370120", "Bacteria", "Bacteria", "92.8", "3.19e-20", "", "NR", "WP_024441286.1", "1370120", "g31726", "i0", "85.5", "2.92899408284024", "55", "8", "97.6", "0", "5", "169", "107", "161", "WP_024441286.1 SNF2-related protein [Mycobacterium sp. UM_WGJ]", "diamond", "495", "92.8", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Mycobacteriales", "Mycobacteriaceae", "Mycobacterium", "Mycobacterium sp. UM_WGJ"], [29940932, "PRJNA1065838_S_NODE_35691_length_163_cov_0.912281_g35589_i0", "PRJNA1065838", "35691", "163", "0.912281", "1.48701803", "Nocardiopsis sp. JB363", "1434837", "Bacteria", "Bacteria", "113", "4.600000000000001e-28", "", "NR", "WP_087104054.1", "1434837", "g35589", "i0", "100", "0.993865030674847", "54", "0", "99.4", "0", "1", "162", "212", "265", "WP_087104054.1 ABC transporter substrate-binding protein [Nocardiopsis sp. JB363]", "diamond", "162", "113", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Streptosporangiales", "Nocardiopsidaceae", "Nocardiopsis", "Nocardiopsis sp. JB363"], [29972337, "PRJNA1065838_S_NODE_23351_length_193_cov_1.076389_g23249_i0", "PRJNA1065838", "23351", "193", "1.076389", "2.07743077", "Micrococcus", "1269", "Bacteria", "Bacteria", "115", "1.67e-29", "", "NR", "WP_206450741.1", "1269", "g23249", "i0", "100", "0.979274611398964", "63", "0", "97.9", "0", "3", "191", "48", "110", "WP_206450741.1 MULTISPECIES: LysR family transcriptional regulator [Micrococcus]", "diamond", "189", "115", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Micrococcales", "Micrococcaceae", "Micrococcus", null], [30225074, "PRJNA1065838_S_NODE_32212_length_168_cov_1.277311_g32110_i0", "PRJNA1065838", "32212", "168", "1.277311", "2.14588248", "Lawsonella clevelandensis", "1528099", "Bacteria", "Bacteria", "125", "4.1799999999999996e-32", "", "NR", "WP_394268147.1", "1528099", "g32110", "i0", "100", "1", "56", "0", "100", "0", "1", "168", "397", "452", "WP_394268147.1 DNA polymerase IV [Lawsonella clevelandensis]", "diamond", "168", "125", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Mycobacteriales", "Lawsonellaceae", "Lawsonella", "Lawsonella clevelandensis"], [31552726, "PRJNA1065838_S_NODE_33076_length_167_cov_0.864407_g32974_i0", "PRJNA1065838", "33076", "167", "0.864407", "1.44355969", "Corynebacterium matruchotii", "43768", "Bacteria", "Bacteria", "44.7", "0.00274", "", "NR", "WP_005520162.1", "43768", "g32974", "i0", "87", "0.413173652694611", "23", "3", "41.3", "0", "72", "4", "1", "23", "WP_005520162.1 hypothetical protein [Corynebacterium matruchotii]", "diamond", "69", "44.7", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Mycobacteriales", "Corynebacteriaceae", "Corynebacterium", "Corynebacterium matruchotii"], [31963616, "PRJNA1065838_S_NODE_31558_length_169_cov_1.300000_g31456_i0", "PRJNA1065838", "31558", "169", "1.3", "2.197", "Mycobacterium tuberculosis", "1773", "Bacteria", "Bacteria", "121", "3.54e-34", "", "NR", "MXI72407.1", "1773", "g31456", "i0", "100", "2.92899408284024", "55", "0", "97.6", "0", "167", "3", "49", "103", "MXI72407.1 arginyltransferase [Mycobacterium tuberculosis]", "diamond", "495", "121", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Mycobacteriales", "Mycobacteriaceae", "Mycobacterium", "Mycobacterium tuberculosis"]], "truncated": false, "filtered_table_rows_count": 11, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "diamond", "p1": "PRJNA1065838", "p2": "Actinomycetota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1065838&tax_phylum=Actinomycetota", "results": [{"value": "PRJNA1065838", "label": "PRJNA1065838", "count": 11, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&tax_phylum=Actinomycetota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1065838&tax_phylum=Actinomycetota", "results": [{"value": "diamond", "label": "diamond", "count": 11, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1065838&tax_phylum=Actinomycetota", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1065838&tax_phylum=Actinomycetota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 11, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1065838&tax_phylum=Actinomycetota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1065838&tax_phylum=Actinomycetota", "results": [], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1065838&tax_phylum=Actinomycetota", "results": [{"value": "Bacillati", "label": "Bacillati", "count": 11, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1065838&tax_phylum=Actinomycetota&tax_kingdom=Bacillati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1065838&tax_phylum=Actinomycetota", "results": [{"value": "Actinomycetota", "label": "Actinomycetota", "count": 11, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1065838", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 410.55490099824965}