{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"diamond\", bioproject = \"PRJNA1059246\" and tax_kingdom = \"Methanobacteriati\"", "rows": [[4003781, "PRJNA1059246_P_NODE_61504_length_251_cov_1.235955_g60878_i0", "PRJNA1059246", "61504", "251", "1.235955", "3.10224705", "Haloferacaceae archaeon", "2080321", "Archaea", "Archaea", "109", "3.82e-28", "", "NR", "MFB6154400.1", "2080321", "g60878", "i0", "62.7", "1.9840637450199201", "83", "30", "99.2", "1", "249", "1", "52", "133", "MFB6154400.1 peptide-methionine (S)-S-oxide reductase MsrA [Haloferacaceae archaeon]", "diamond", "498", "109", "1", "Archaea", "Stenosarchaea group", "Methanobacteriati", "Methanobacteriota", "Halobacteria", "Halobacteriales", "Haloferacaceae", null, "Haloferacaceae archaeon"], [27311917, "PRJNA1059246_P_NODE_40223_length_335_cov_2.030534_g39597_i0", "PRJNA1059246", "40223", "335", "2.030534", "6.8022889", "root", "1", "Root_unresolved", "Root_unresolved", "45.8", "0.00826", "", "NR", "WP_286475720.1", "2584467", "g39597", "i0", "44.8", "1.44179104477612", "58", "30", "51.9", "1", "276", "103", "111", "166", "WP_286475720.1 CDC27 family protein [Methanobacterium aridiramus]", "diamond", "483", "46.2", "0.991341991341991", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobacterium", "Methanobacterium aridiramus"], [27446474, "PRJNA1059246_P_NODE_39903_length_337_cov_1.458333_g39277_i0", "PRJNA1059246", "39903", "337", "1.458333", "4.91458221", "Thermoplasmatota archaeon", "2806419", "Archaea", "Archaea", "73.2", "2.05e-12", "", "NR", "MCU0798948.1", "2806419", "g39277", "i0", "72.3", "1.25519287833828", "47", "13", "41.8", "0", "141", "1", "15", "61", "MCU0798948.1 ATPase [Thermoplasmatota archaeon]", "diamond", "423", "73.2", "1", "Archaea", null, "Methanobacteriati", "Thermoplasmatota", null, null, null, null, "Thermoplasmatota archaeon"], [27477728, "PRJNA1059246_P_NODE_19383_length_519_cov_1.659193_g18765_i0", "PRJNA1059246", "19383", "519", "1.659193", "8.61121167", "Methanobacteriota archaeon", "2026739", "Archaea", "Archaea", "219", "5.12e-65", "", "NR", "RMG34081.1", "2026739", "g18765", "i0", "66.7", "1.90173410404624", "165", "53", "94.2", "2", "519", "31", "403", "567", "RMG34081.1 MAG: S9 family peptidase [Methanobacteriota archaeon]", "diamond", "987", "219", "1", "Archaea", null, "Methanobacteriati", "Methanobacteriota", null, null, null, null, "Methanobacteriota archaeon"], [27825248, "PRJNA1059246_P_NODE_48764_length_294_cov_1.533937_g48138_i0", "PRJNA1059246", "48764", "294", "1.533937", "4.50977478", "Methanothrix sp.", "90426", "Archaea", "Archaea", "52", "2.87e-5", "", "NR", "NMB86174.1", "90426", "g48138", "i0", "49.1", "0.561224489795918", "55", "28", "56.1", "0", "2", "166", "48", "102", "NMB86174.1 tetratricopeptide repeat protein [Methanothrix sp.]", "diamond", "165", "52", "1", "Archaea", "Stenosarchaea group", "Methanobacteriati", "Methanobacteriota", "Methanomicrobia", "Methanotrichales", "Methanotrichaceae", "Methanothrix", "Methanothrix sp."], [28077581, "PRJNA1059246_P_NODE_37305_length_351_cov_2.093525_g36679_i0", "PRJNA1059246", "37305", "351", "2.093525", "7.34827275", "Methanosarcinales archaeon", "2250255", "Archaea", "Archaea", "84.3", "3.16e-16", "", "NR", "RYE85578.1", "2250255", "g36679", "i0", "44.4", "0.923076923076923", "108", "54", "88.9", "3", "349", "38", "404", "509", "RYE85578.1 MAG: hypothetical protein EOO65_00010 [Methanosarcinales archaeon]", "diamond", "324", "84.3", "1", "Archaea", "Stenosarchaea group", "Methanobacteriati", "Methanobacteriota", "Methanomicrobia", "Methanosarcinales", null, null, "Methanosarcinales archaeon"], [28330265, "PRJNA1059246_P_NODE_67546_length_246_cov_0.890173_g66920_i0", "PRJNA1059246", "67546", "246", "0.890173", "2.18982558", "Natronoarchaeum rubrum", "755311", "Archaea", "Archaea", "60.1", "1.46e-8", "", "NR", "WP_256393113.1", "755311", "g66920", "i0", "54.8", "1.51219512195122", "62", "25", "74.4", "2", "61", "243", "4", "63", "WP_256393113.1 histidine phosphatase family protein [Natronoarchaeum rubrum]", "diamond", "372", "60.1", "1", "Archaea", "Stenosarchaea group", "Methanobacteriati", "Methanobacteriota", "Halobacteria", "Halobacteriales", "Natronoarchaeaceae", "Natronoarchaeum", "Natronoarchaeum rubrum"], [28930202, "PRJNA1059246_P_NODE_18568_length_533_cov_1.330435_g17951_i0", "PRJNA1059246", "18568", "533", "1.330435", "7.09121855", "Methanobacteriota archaeon", "2026739", "Archaea", "Archaea", "90.1", "3.54e-18", "", "NR", "MAV59833.1", "2026739", "g17951", "i0", "40.7", "4.4577861163227", "113", "66", "63", "1", "376", "41", "164", "276", "MAV59833.1 hypothetical protein [Methanobacteriota archaeon]", "diamond", "2376", "90.1", "1", "Archaea", null, "Methanobacteriati", "Methanobacteriota", null, null, null, null, "Methanobacteriota archaeon"], [29151612, "PRJNA1059246_P_NODE_54649_length_275_cov_1.252475_g54023_i0", "PRJNA1059246", "54649", "275", "1.252475", "3.44430625", "Methanosarcinales archaeon", "2250255", "Archaea", "Archaea", "67", "9.09e-12", "", "NR", "RYE81919.1", "2250255", "g54023", "i0", "42.1", "0.829090909090909", "76", "42", "81.8", "2", "2", "226", "34", "108", "RYE81919.1 MAG: hypothetical protein EOO65_06165 [Methanosarcinales archaeon]", "diamond", "228", "67", "1", "Archaea", "Stenosarchaea group", "Methanobacteriati", "Methanobacteriota", "Methanomicrobia", "Methanosarcinales", null, null, "Methanosarcinales archaeon"], [29372238, "PRJNA1059246_P_NODE_15529_length_593_cov_1.184615_g14929_i0", "PRJNA1059246", "15529", "593", "1.184615", "7.02476695", "Methanoregula sp.", "2052170", "Archaea", "Archaea", "77.8", "8.44e-13", "", "NR", "MDD1698370.1", "2052170", "g14929", "i0", "29.7", "1.02192242833052", "202", "109", "97.1", "7", "591", "16", "336", "514", "MDD1698370.1 GPI anchored serine-threonine rich family protein [Methanoregula sp.]", "diamond", "606", "77.8", "1", "Archaea", "Stenosarchaea group", "Methanobacteriati", "Methanobacteriota", "Methanomicrobia", "Methanomicrobiales", "Methanoregulaceae", "Methanoregula", "Methanoregula sp."], [29490224, "PRJNA1059246_P_NODE_37150_length_352_cov_1.655914_g36524_i0", "PRJNA1059246", "37150", "352", "1.655914", "5.82881728", "Methanomada group", "2283794", "Archaea", "Archaea", "58.2", "3.48e-7", "", "NR", "KYK25085.1", "1803821", "g36524", "i0", "40.6", "2.96590909090909", "69", "38", "56.3", "2", "346", "149", "202", "270", "KYK25085.1 MAG: hypothetical protein AYK26_02730 [Euryarchaeota archaeon SM23-78]", "diamond", "1044", "58.5", "0.994871794871795", "Archaea", null, "Methanobacteriati", "Methanobacteriota", null, null, null, null, "Euryarchaeota archaeon SM23-78"], [29972212, "PRJNA1059246_P_NODE_45051_length_312_cov_0.966527_g44425_i0", "PRJNA1059246", "45051", "312", "0.966527", "3.01556424", "Methanothermus fervidus DSM 2", "2180", "Archaea", "Archaea", "58.5", "2.28e-7", "", "NR", "ADP76834.1", "523846", "g44425", "i0", "38.7", "0.721153846153846", "75", "45", "72.1", "1", "87", "311", "4", "77", "ADP76834.1 AMP-dependent synthetase and ligase [Methanothermus fervidus DSM 2088]", "diamond", "225", "58.5", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanothermaceae", "Methanothermus", "Methanothermus fervidus"], [30027365, "PRJNA1059246_P_NODE_72251_length_241_cov_0.916667_g71625_i0", "PRJNA1059246", "72251", "241", "0.916667", "2.20916747", "Archaea", "2157", "Archaea", "Archaea", "50.1", "8.26e-5", "", "NR", "KYK25085.1", "1803821", "g71625", "i0", "37.9", "4.49377593360996", "66", "38", "78.4", "2", "189", "1", "202", "267", "KYK25085.1 MAG: hypothetical protein AYK26_02730 [Euryarchaeota archaeon SM23-78]", "diamond", "1083", "50.4", "0.994047619047619", "Archaea", null, "Methanobacteriati", "Methanobacteriota", null, null, null, null, "Euryarchaeota archaeon SM23-78"], [30730489, "PRJNA1059246_P_NODE_47394_length_301_cov_1.013158_g46768_i0", "PRJNA1059246", "47394", "301", "1.013158", "3.04960558", "Candidatus Methanophagaceae archaeon", "3386247", "Archaea", "Archaea", "72.4", "2.63e-12", "", "NR", "KAF5437882.1", "3386247", "g46768", "i0", "48.6", "0.737541528239203", "74", "30", "73.8", "2", "48", "269", "137", "202", "KAF5437882.1 Kazal-type serine protease inhibitor domain-containing protein [Candidatus Methanophagaceae archaeon]", "diamond", "222", "72.4", "1", "Archaea", "Stenosarchaea group", "Methanobacteriati", "Methanobacteriota", "Methanomicrobia", "Candidatus Methanophagales", "Candidatus Methanophagaceae", null, "Candidatus Methanophagaceae archaeon"], [31014877, "PRJNA1059246_P_NODE_58375_length_262_cov_1.539683_g57749_i0", "PRJNA1059246", "58375", "262", "1.539683", "4.03396946", "Methanomicrobiales archaeon", "2184052", "Archaea", "Archaea", "56.2", "9.2e-8", "", "NR", "NYT06209.1", "2184052", "g57749", "i0", "38.2", "1.54580152671756", "68", "42", "77.9", "0", "204", "1", "1", "68", "NYT06209.1 hypothetical protein [Methanomicrobiales archaeon]", "diamond", "405", "56.2", "1", "Archaea", "Stenosarchaea group", "Methanobacteriati", "Methanobacteriota", "Methanomicrobia", "Methanomicrobiales", null, null, "Methanomicrobiales archaeon"], [31868527, "PRJNA1059246_P_NODE_42437_length_324_cov_1.533865_g41811_i0", "PRJNA1059246", "42437", "324", "1.533865", "4.9697226", "Candidatus Hadarchaeales archaeon", "3058034", "Archaea", "Archaea", "62.4", "1.01e-8", "", "NR", "MFN4133173.1", "3058034", "g41811", "i0", "31.4", "0.972222222222222", "105", "64", "95.4", "2", "14", "322", "159", "257", "MFN4133173.1 hypothetical protein [Candidatus Hadarchaeales archaeon]", "diamond", "315", "62.4", "1", "Archaea", null, "Methanobacteriati", "Candidatus Hadarchaeota", "Candidatus Hadarchaeia", "Candidatus Hadarchaeales", null, null, "Candidatus Hadarchaeales archaeon"], [32058462, "PRJNA1059246_P_NODE_46438_length_305_cov_1.793103_g45812_i0", "PRJNA1059246", "46438", "305", "1.793103", "5.46896415", "Methanogenium marinum", "348610", "Archaea", "Archaea", "40.8", "0.0489", "", "NR", "WP_274923711.1", "348610", "g45812", "i0", "43.9", "0.40327868852459", "41", "23", "40.3", "0", "162", "40", "7", "47", "WP_274923711.1 hypothetical protein [Methanogenium marinum]", "diamond", "123", "40.8", "1", "Archaea", "Stenosarchaea group", "Methanobacteriati", "Methanobacteriota", "Methanomicrobia", "Methanomicrobiales", "Methanomicrobiaceae", "Methanogenium", "Methanogenium marinum"], [32848131, "PRJNA1059246_P_NODE_57840_length_264_cov_1.481675_g57214_i0", "PRJNA1059246", "57840", "264", "1.481675", "3.911622", "Methanobacterium arcticum", "386456", "Archaea", "Archaea", "48.9", "2.98e-4", "", "NR", "WP_052379777.1", "386456", "g57214", "i0", "64.5", "0.727272727272727", "31", "11", "35.2", "0", "260", "168", "214", "244", "WP_052379777.1 tetratricopeptide repeat protein, partial [Methanobacterium arcticum]", "diamond", "192", "48.9", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobacterium", "Methanobacterium arcticum"]], "truncated": false, "filtered_table_rows_count": 18, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_kingdom\" = :p2 order by rowid limit 101", "params": {"p0": "diamond", "p1": "PRJNA1059246", "p2": "Methanobacteriati"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1059246&tax_kingdom=Methanobacteriati", "results": [{"value": "PRJNA1059246", "label": "PRJNA1059246", "count": 18, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&tax_kingdom=Methanobacteriati", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1059246&tax_kingdom=Methanobacteriati", "results": [{"value": "diamond", "label": "diamond", "count": 18, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1059246&tax_kingdom=Methanobacteriati", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1059246&tax_kingdom=Methanobacteriati", "results": [{"value": "Archaea", "label": "Archaea", "count": 18, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1059246&tax_kingdom=Methanobacteriati&tax_superkingdom=Archaea", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1059246&tax_kingdom=Methanobacteriati", "results": [{"value": "Stenosarchaea group", "label": "Stenosarchaea group", "count": 9, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1059246&tax_kingdom=Methanobacteriati&tax_clade=Stenosarchaea+group", "selected": false}, {"value": "Methanomada group", "label": "Methanomada group", "count": 3, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1059246&tax_kingdom=Methanobacteriati&tax_clade=Methanomada+group", "selected": false}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1059246&tax_kingdom=Methanobacteriati", "results": [{"value": "Methanobacteriati", "label": "Methanobacteriati", "count": 18, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1059246", "selected": true}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1059246&tax_kingdom=Methanobacteriati", "results": [{"value": "Methanobacteriota", "label": "Methanobacteriota", "count": 16, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1059246&tax_kingdom=Methanobacteriati&tax_phylum=Methanobacteriota", "selected": false}, {"value": "Candidatus Hadarchaeota", "label": "Candidatus Hadarchaeota", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1059246&tax_kingdom=Methanobacteriati&tax_phylum=Candidatus+Hadarchaeota", "selected": false}, {"value": "Thermoplasmatota", "label": "Thermoplasmatota", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1059246&tax_kingdom=Methanobacteriati&tax_phylum=Thermoplasmatota", "selected": false}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 225.81421100039734}