{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"diamond\", bioproject = \"PRJNA1011833\" and tax_phylum = \"Bacillota\"", "rows": [[27445814, "PRJNA1011833_S_NODE_28223_length_223_cov_1.038889_g27803_i0", "PRJNA1011833", "28223", "223", "1.038889", "2.31672247", "unclassified Amedibacterium", "3088137", "Bacteria", "Bacteria", "42", "0.05", "", "NR", "WP_233511338.1", "3088137", "g27803", "i0", "42.6", "0.726457399103139", "54", "27", "70", "3", "19", "174", "188", "239", "WP_233511338.1 MULTISPECIES: hypothetical protein [unclassified Amedibacterium]", "diamond", "162", "42", "1", "Bacteria", null, "Bacillati", "Bacillota", "Erysipelotrichia", "Erysipelotrichales", "Erysipelotrichaceae", "Amedibacterium", null], [27824571, "PRJNA1011833_S_NODE_34104_length_200_cov_2.369427_g33684_i0", "PRJNA1011833", "34104", "200", "2.369427", "4.738854", "Holdemanella biformis", "1735", "Bacteria", "Bacteria", "43.1", "0.0155", "", "NR", "WP_227976277.1", "1735", "g33684", "i0", "39", "1.23", "82", "31", "97.5", "3", "5", "199", "153", "232", "WP_227976277.1 glycoside hydrolase family 13 protein [Holdemanella biformis]", "diamond", "246", "43.1", "1", "Bacteria", null, "Bacillati", "Bacillota", "Erysipelotrichia", "Erysipelotrichales", "Erysipelotrichaceae", "Holdemanella", "Holdemanella biformis"], [28006468, "PRJNA1011833_S_NODE_51585_length_161_cov_1.220339_g51165_i0", "PRJNA1011833", "51585", "161", "1.220339", "1.96474579", "Clostridia", "186801", "Bacteria", "Bacteria", "100", "4.53e-24", "", "NR", "MCI5596461.1", "1898203", "g51165", "i0", "81.1", "18.6335403726708", "53", "10", "98.8", "0", "3", "161", "131", "183", "MCI5596461.1 UDP-glucose 4-epimerase GalE [Lachnospiraceae bacterium]", "diamond", "3000", "101", "0.99009900990099", "Bacteria", null, "Bacillati", "Bacillota", "Clostridia", "Lachnospirales", "Lachnospiraceae", null, "Lachnospiraceae bacterium"], [28606128, "PRJNA1011833_S_NODE_10727_length_360_cov_5.182965_g10308_i0", "PRJNA1011833", "10727", "360", "5.182965", "18.658674", "Bacteria", "2", "Bacteria", "Bacteria", "58.9", "2.67e-7", "", "NR", "WP_029699112.1", "1391647", "g10308", "i0", "32.2", "5.675", "115", "69", "93.3", "6", "359", "24", "122", "230", "WP_029699112.1 DEAD/DEAH box helicase [Clostridium sp. Ade.TY]", "diamond", "2043", "58.9", "1", "Bacteria", null, "Bacillati", "Bacillota", "Clostridia", "Eubacteriales", "Clostridiaceae", "Clostridium", "Clostridium sp. Ade.TY"], [29268978, "PRJNA1011833_S_NODE_55349_length_155_cov_1.196429_g54929_i0", "PRJNA1011833", "55349", "155", "1.196429", "1.85446495", "root", "1", "Root_unresolved", "Root_unresolved", "42.7", "0.00609", "", "NR", "WP_262458101.1", "1496", "g54929", "i0", "48.7", "3.01935483870968", "39", "17", "69.7", "1", "42", "149", "68", "106", "WP_262458101.1 endonuclease/exonuclease/phosphatase family protein [Clostridioides difficile]", "diamond", "468", "42.7", "1", "Bacteria", null, "Bacillati", "Bacillota", "Clostridia", "Peptostreptococcales", "Peptostreptococcaceae", "Clostridioides", "Clostridioides difficile"], [29710860, "PRJNA1011833_S_NODE_11310_length_352_cov_8.896440_g10890_i0", "PRJNA1011833", "11310", "352", "8.89644", "31.3154688", "Bacteria", "2", "Bacteria", "Bacteria", "112", "8.130000000000001e-27", "", "NR", "WP_221880430.1", "1399", "g10890", "i0", "50.5", "15.7244318181818", "103", "51", "87.8", "0", "344", "36", "305", "407", "WP_221880430.1 NAD-dependent succinate-semialdehyde dehydrogenase, partial [Cytobacillus firmus]", "diamond", "5535", "113", "0.991150442477876", "Bacteria", null, "Bacillati", "Bacillota", "Bacilli", "Bacillales", "Bacillaceae", "Cytobacillus", "Cytobacillus firmus"], [30698122, "PRJNA1011833_S_NODE_16594_length_297_cov_1.854331_g16174_i0", "PRJNA1011833", "16594", "297", "1.854331", "5.50736307", "Leuconostoc pseudomesenteroides", "33968", "Bacteria", "Bacteria", "43.5", "0.0158", "", "NR", "WP_349550031.1", "33968", "g16174", "i0", "27.2", "0.818181818181818", "81", "53", "77.8", "2", "51", "281", "30", "108", "WP_349550031.1 single-stranded DNA-binding protein [Leuconostoc pseudomesenteroides]", "diamond", "243", "43.5", "1", "Bacteria", null, "Bacillati", "Bacillota", "Bacilli", "Lactobacillales", "Lactobacillaceae", "Leuconostoc", "Leuconostoc pseudomesenteroides"], [31267030, "PRJNA1011833_S_NODE_38515_length_188_cov_0.958621_g38095_i0", "PRJNA1011833", "38515", "188", "0.958621", "1.80220748", "Oscillospiraceae bacterium", "2485925", "Bacteria", "Bacteria", "42.7", "0.0174", "", "NR", "MCC8043763.1", "2485925", "g38095", "i0", "40.5", "0.670212765957447", "42", "24", "65.4", "1", "137", "15", "100", "141", "MCC8043763.1 sugar phosphate isomerase/epimerase [Oscillospiraceae bacterium]", "diamond", "126", "42.7", "1", "Bacteria", null, "Bacillati", "Bacillota", "Clostridia", "Eubacteriales", "Oscillospiraceae", null, "Oscillospiraceae bacterium"], [32057768, "PRJNA1011833_S_NODE_5418_length_455_cov_12.621359_g5006_i0", "PRJNA1011833", "5418", "455", "12.621359", "57.42718345", "Lachnospiraceae bacterium", "1898203", "Bacteria", "Bacteria", "87.4", "3.45e-19", "", "NR", "MBQ5561215.1", "1898203", "g5006", "i0", "40.7", "1.21978021978022", "86", "51", "56.7", "0", "292", "35", "16", "101", "MBQ5561215.1 thioredoxin [Lachnospiraceae bacterium]", "diamond", "555", "87.4", "1", "Bacteria", null, "Bacillati", "Bacillota", "Clostridia", "Lachnospirales", "Lachnospiraceae", null, "Lachnospiraceae bacterium"]], "truncated": false, "filtered_table_rows_count": 9, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "diamond", "p1": "PRJNA1011833", "p2": "Bacillota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1011833&tax_phylum=Bacillota", "results": [{"value": "PRJNA1011833", "label": "PRJNA1011833", "count": 9, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&tax_phylum=Bacillota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1011833&tax_phylum=Bacillota", "results": [{"value": "diamond", "label": "diamond", "count": 9, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1011833&tax_phylum=Bacillota", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1011833&tax_phylum=Bacillota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 9, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1011833&tax_phylum=Bacillota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1011833&tax_phylum=Bacillota", "results": [], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1011833&tax_phylum=Bacillota", "results": [{"value": "Bacillati", "label": "Bacillati", "count": 9, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1011833&tax_phylum=Bacillota&tax_kingdom=Bacillati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1011833&tax_phylum=Bacillota", "results": [{"value": "Bacillota", "label": "Bacillota", "count": 9, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1011833", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 206.6090330008592}