{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"diamond\", bioproject = \"PRJNA1008049\" and tax_phylum = \"Actinomycetota\"", "rows": [[27160636, "PRJNA1008049_S_NODE_4422_length_155_cov_6.095238_g4404_i0", "PRJNA1008049", "4422", "155", "6.095238", "9.4476189", "Pseudoclavibacter sp.", "1915061", "Bacteria", "Bacteria", "53.5", "1.72e-6", "", "NR", "HHW49953.1", "1915061", "g4404", "i0", "100", "2.41935483870968", "25", "0", "48.4", "0", "154", "80", "397", "421", "HHW49953.1 aspartate kinase [Pseudoclavibacter sp.]", "diamond", "375", "53.5", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Micrococcales", "Microbacteriaceae", "Pseudoclavibacter", "Pseudoclavibacter sp."], [29655103, "PRJNA1008049_S_NODE_4310_length_156_cov_4.866142_g4292_i0", "PRJNA1008049", "4310", "156", "4.866142", "7.59118152", "Rothia sp. HSID18", "2419515", "Bacteria", "Bacteria", "100", "2.1599999999999998e-23", "", "NR", "WP_238693533.1", "2419515", "g4292", "i0", "98", "0.980769230769231", "51", "1", "98.1", "0", "154", "2", "28", "78", "WP_238693533.1 type IV secretory system conjugative DNA transfer family protein, partial [Rothia sp. HSID18069]", "diamond", "153", "100", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Micrococcales", "Micrococcaceae", "Rothia", "Rothia sp. HSID18069"], [29932465, "PRJNA1008049_S_NODE_3391_length_164_cov_10.511111_g3373_i0", "PRJNA1008049", "3391", "164", "10.511111", "17.23822204", "Rothia", "32207", "Bacteria", "Bacteria", "107", "1.6e-26", "", "NR", "WP_168744050.1", "2047", "g3373", "i0", "98.1", "2.96341463414634", "54", "1", "98.8", "0", "164", "3", "159", "212", "WP_168744050.1 RNA polymerase sigma factor [Rothia dentocariosa]", "diamond", "486", "107", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Micrococcales", "Micrococcaceae", "Rothia", "Rothia dentocariosa"], [32461559, "PRJNA1008049_S_NODE_2579_length_174_cov_8.179310_g2561_i0", "PRJNA1008049", "2579", "174", "8.17931", "14.2319994", "Actinomycetes", "1760", "Bacteria", "Bacteria", "87", "4.29e-19", "", "NR", "MES6370626.1", "1747", "g2561", "i0", "73.7", "10.8103448275862", "57", "15", "98.3", "0", "172", "2", "72", "128", "MES6370626.1 glucosidase [Cutibacterium acnes]", "diamond", "1881", "87.4", "0.995423340961098", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Propionibacteriales", "Propionibacteriaceae", "Cutibacterium", "Cutibacterium acnes"]], "truncated": false, "filtered_table_rows_count": 4, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "diamond", "p1": "PRJNA1008049", "p2": "Actinomycetota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1008049&tax_phylum=Actinomycetota", "results": [{"value": "PRJNA1008049", "label": "PRJNA1008049", "count": 4, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&tax_phylum=Actinomycetota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1008049&tax_phylum=Actinomycetota", "results": [{"value": "diamond", "label": "diamond", "count": 4, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1008049&tax_phylum=Actinomycetota", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1008049&tax_phylum=Actinomycetota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 4, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1008049&tax_phylum=Actinomycetota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1008049&tax_phylum=Actinomycetota", "results": [], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1008049&tax_phylum=Actinomycetota", "results": [{"value": "Bacillati", "label": "Bacillati", "count": 4, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1008049&tax_phylum=Actinomycetota&tax_kingdom=Bacillati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1008049&tax_phylum=Actinomycetota", "results": [{"value": "Actinomycetota", "label": "Actinomycetota", "count": 4, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1008049", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 416.543952000211}