{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"diamond\", bioproject = \"PRJEB6097\" and tax_phylum = \"Pseudomonadota\"", "rows": [[2675646, "PRJEB6097_S_NODE_143_length_536_cov_23544.139721_g89_i0", "PRJEB6097", "143", "536", "23544.139721", "126196.58890456", "Undibacterium luofuense", "2828733", "Bacteria", "Bacteria", "184", "4.049999999999999e-55", "", "NR", "WP_329604620.1", "2828733", "g89", "i0", "94.2", "0.576492537313433", "103", "6", "57.6", "0", "536", "228", "48", "150", "WP_329604620.1 DUF3106 domain-containing protein [Undibacterium luofuense]", "diamond", "309", "184", "1", "Bacteria", null, "Pseudomonadati", "Pseudomonadota", "Betaproteobacteria", "Burkholderiales", "Oxalobacteraceae", "Undibacterium", "Undibacterium luofuense"], [2675673, "PRJEB6097_S_NODE_6323_length_163_cov_2.070312_g6269_i0", "PRJEB6097", "6323", "163", "2.070312", "3.37460856", "Undibacterium luofuense", "2828733", "Bacteria", "Bacteria", "99", "2.4299999999999994e-24", "", "NR", "WP_212689400.1", "2828733", "g6269", "i0", "100", "0.993865030674847", "54", "0", "99.4", "0", "163", "2", "133", "186", "WP_212689400.1 phasin family protein [Undibacterium luofuense]", "diamond", "162", "99", "1", "Bacteria", null, "Pseudomonadati", "Pseudomonadota", "Betaproteobacteria", "Burkholderiales", "Oxalobacteraceae", "Undibacterium", "Undibacterium luofuense"], [10328608, "PRJEB6097_S_NODE_1149_length_348_cov_8.156550_g1095_i0", "PRJEB6097", "1149", "348", "8.15655", "28.384794", "Undibacterium luofuense", "2828733", "Bacteria", "Bacteria", "198", "1.57e-62", "", "NR", "WP_212687423.1", "2828733", "g1095", "i0", "96.3", "0.939655172413793", "109", "4", "94", "0", "347", "21", "73", "181", "WP_212687423.1 ribosome recycling factor [Undibacterium luofuense]", "diamond", "327", "198", "1", "Bacteria", null, "Pseudomonadati", "Pseudomonadota", "Betaproteobacteria", "Burkholderiales", "Oxalobacteraceae", "Undibacterium", "Undibacterium luofuense"], [12879224, "PRJEB6097_S_NODE_591_length_413_cov_30513.613757_g537_i0", "PRJEB6097", "591", "413", "30513.613757", "126021.22481641", "Undibacterium squillarum", "1131567", "Bacteria", "Bacteria", "116", "9.36e-30", "", "NR", "WP_189359187.1", "1131567", "g537", "i0", "95.5", "0.479418886198547", "66", "3", "47.9", "0", "3", "200", "62", "127", "WP_189359187.1 hypothetical protein [Undibacterium squillarum]", "diamond", "198", "116", "1", "Bacteria", null, "Pseudomonadati", "Pseudomonadota", "Betaproteobacteria", "Burkholderiales", "Oxalobacteraceae", "Undibacterium", "Undibacterium squillarum"], [20526525, "PRJEB6097_S_NODE_5557_length_200_cov_1.454545_g5503_i0", "PRJEB6097", "5557", "200", "1.454545", "2.90909", "Undibacterium luofuense", "2828733", "Bacteria", "Bacteria", "89.7", "4.55e-19", "", "NR", "WP_212688280.1", "2828733", "g5503", "i0", "89.8", "0.735", "49", "5", "73.5", "0", "151", "5", "1", "49", "WP_212688280.1 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [Undibacterium luofuense]", "diamond", "147", "89.7", "1", "Bacteria", null, "Pseudomonadati", "Pseudomonadota", "Betaproteobacteria", "Burkholderiales", "Oxalobacteraceae", "Undibacterium", "Undibacterium luofuense"], [26685313, "PRJEB6097_S_NODE_6161_length_168_cov_2.661654_g6107_i0", "PRJEB6097", "6161", "168", "2.661654", "4.47157872", "Undibacterium squillarum", "1131567", "Bacteria", "Bacteria", "71.6", "8.96e-13", "", "NR", "WP_373295317.1", "1131567", "g6107", "i0", "100", "0.785714285714286", "44", "0", "78.6", "0", "168", "37", "82", "125", "WP_373295317.1 RNA polymerase sigma factor RpoD [Undibacterium squillarum]", "diamond", "132", "71.6", "1", "Bacteria", null, "Pseudomonadati", "Pseudomonadota", "Betaproteobacteria", "Burkholderiales", "Oxalobacteraceae", "Undibacterium", "Undibacterium squillarum"], [26812144, "PRJEB6097_S_NODE_6681_length_153_cov_1.016949_g6627_i0", "PRJEB6097", "6681", "153", "1.016949", "1.55593197", "Undibacterium luofuense", "2828733", "Bacteria", "Bacteria", "62", "2.88e-11", "", "NR", "WP_212689901.1", "2828733", "g6627", "i0", "100", "0.588235294117647", "30", "0", "58.8", "0", "1", "90", "27", "56", "WP_212689901.1 MotA/TolQ/ExbB proton channel family protein, partial [Undibacterium luofuense]", "diamond", "90", "62", "1", "Bacteria", null, "Pseudomonadati", "Pseudomonadota", "Betaproteobacteria", "Burkholderiales", "Oxalobacteraceae", "Undibacterium", "Undibacterium luofuense"], [27879699, "PRJEB6097_S_NODE_6325_length_163_cov_1.765625_g6271_i0", "PRJEB6097", "6325", "163", "1.765625", "2.87796875", "Undibacterium", "401469", "Bacteria", "Bacteria", "74.3", "5.19e-14", "", "NR", "WP_374519713.1", "1131567", "g6271", "i0", "91.1", "2.48466257668712", "45", "4", "82.8", "0", "163", "29", "42", "86", "WP_374519713.1 D-glycero-beta-D-manno-heptose-7-phosphate kinase [Undibacterium squillarum]", "diamond", "405", "74.3", "1", "Bacteria", null, "Pseudomonadati", "Pseudomonadota", "Betaproteobacteria", "Burkholderiales", "Oxalobacteraceae", "Undibacterium", "Undibacterium squillarum"], [29086462, "PRJEB6097_S_NODE_2408_length_284_cov_3.000000_g2354_i0", "PRJEB6097", "2408", "284", "3", "8.52", "Undibacterium luofuense", "2828733", "Bacteria", "Bacteria", "140", "1.88e-37", "", "NR", "WP_212688285.1", "2828733", "g2354", "i0", "92.1", "0.802816901408451", "76", "6", "80.3", "0", "2", "229", "343", "418", "WP_212688285.1 flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [Undibacterium luofuense]", "diamond", "228", "140", "1", "Bacteria", null, "Pseudomonadati", "Pseudomonadota", "Betaproteobacteria", "Burkholderiales", "Oxalobacteraceae", "Undibacterium", "Undibacterium luofuense"], [31234118, "PRJEB6097_S_NODE_6815_length_150_cov_1.104348_g6761_i0", "PRJEB6097", "6815", "150", "1.104348", "1.656522", "Undibacterium squillarum", "1131567", "Bacteria", "Bacteria", "50.4", "2.04e-5", "", "NR", "WP_373295317.1", "1131567", "g6761", "i0", "100", "0.52", "26", "0", "52", "0", "73", "150", "57", "82", "WP_373295317.1 RNA polymerase sigma factor RpoD [Undibacterium squillarum]", "diamond", "78", "50.4", "1", "Bacteria", null, "Pseudomonadati", "Pseudomonadota", "Betaproteobacteria", "Burkholderiales", "Oxalobacteraceae", "Undibacterium", "Undibacterium squillarum"], [31866722, "PRJEB6097_S_NODE_1757_length_310_cov_6.265455_g1703_i0", "PRJEB6097", "1757", "310", "6.265455", "19.4229105", "Undibacterium luofuense", "2828733", "Bacteria", "Bacteria", "96.3", "2.9099999999999996e-23", "", "NR", "WP_212688905.1", "2828733", "g1703", "i0", "98.8", "0.82258064516129", "85", "1", "82.3", "0", "295", "41", "7", "91", "WP_212688905.1 hypothetical protein [Undibacterium luofuense]", "diamond", "255", "96.3", "1", "Bacteria", null, "Pseudomonadati", "Pseudomonadota", "Betaproteobacteria", "Burkholderiales", "Oxalobacteraceae", "Undibacterium", "Undibacterium luofuense"]], "truncated": false, "filtered_table_rows_count": 11, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "diamond", "p1": "PRJEB6097", "p2": "Pseudomonadota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJEB6097&tax_phylum=Pseudomonadota", "results": [{"value": "PRJEB6097", "label": "PRJEB6097", "count": 11, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&tax_phylum=Pseudomonadota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJEB6097&tax_phylum=Pseudomonadota", "results": [{"value": "diamond", "label": "diamond", "count": 11, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJEB6097&tax_phylum=Pseudomonadota", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJEB6097&tax_phylum=Pseudomonadota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 11, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJEB6097&tax_phylum=Pseudomonadota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJEB6097&tax_phylum=Pseudomonadota", "results": [], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJEB6097&tax_phylum=Pseudomonadota", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 11, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJEB6097&tax_phylum=Pseudomonadota&tax_kingdom=Pseudomonadati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJEB6097&tax_phylum=Pseudomonadota", "results": [{"value": "Pseudomonadota", "label": "Pseudomonadota", "count": 11, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJEB6097", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 174.5571670035133}