{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"diamond\", bioproject = \"PRJEB55122\" and tax_phylum = \"Actinomycetota\"", "rows": [[23073258, "PRJEB55122_P_NODE_37939_length_168_cov_0.873950_g37542_i0", "PRJEB55122", "37939", "168", "0.87395", "1.468236", "Luteococcus sp.", "1969402", "Bacteria", "Bacteria", "110", "6.5e-28", "", "NR", "WP_394277340.1", "1969402", "g37542", "i0", "94.6", "1", "56", "3", "100", "0", "168", "1", "174", "229", "WP_394277340.1 neutral zinc metallopeptidase [Luteococcus sp.]", "diamond", "168", "110", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Propionibacteriales", "Propionibacteriaceae", "Luteococcus", "Luteococcus sp."], [26716618, "PRJEB55122_P_NODE_22321_length_231_cov_1.142857_g21924_i0", "PRJEB55122", "22321", "231", "1.142857", "2.63999967", "Streptomyces sp. HSW2", "1931", "Bacteria", "Bacteria", "42.7", "0.0123", "", "NR", "WP_349997640.1", "3142890", "g21924", "i0", "42", "0.896103896103896", "69", "35", "87", "2", "9", "209", "57", "122", "WP_349997640.1 hypothetical protein [Streptomyces sp. HSW2009]", "diamond", "207", "42.7", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Kitasatosporales", "Streptomycetaceae", "Streptomyces", "Streptomyces sp. HSW2009"], [27033524, "PRJEB55122_P_NODE_28902_length_196_cov_1.578231_g28505_i0", "PRJEB55122", "28902", "196", "1.578231", "3.09333276", "Acidimicrobiales bacterium", "2201156", "Bacteria", "Bacteria", "42.4", "0.028", "", "NR", "HMG40725.1", "2201156", "g28505", "i0", "47.5", "0.903061224489796", "59", "24", "81.1", "3", "189", "31", "350", "407", "HMG40725.1 hypothetical protein [Acidimicrobiales bacterium]", "diamond", "177", "42.4", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Acidimicrobiia", "Acidimicrobiales", null, null, "Acidimicrobiales bacterium"], [27690626, "PRJEB55122_P_NODE_35264_length_173_cov_1.266129_g34867_i0", "PRJEB55122", "35264", "173", "1.266129", "2.19040317", "Dermatophilaceae", "85018", "Bacteria", "Bacteria", "71.2", "2.72e-13", "", "NR", "WP_028326812.1", "1863", "g34867", "i0", "67.3", "1.80346820809249", "49", "16", "85", "0", "171", "25", "24", "72", "WP_028326812.1 TetR/AcrR family transcriptional regulator [Dermatophilus congolensis]", "diamond", "312", "71.6", "0.994413407821229", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Micrococcales", "Dermatophilaceae", "Dermatophilus", "Dermatophilus congolensis"], [27697381, "PRJEB55122_P_NODE_37164_length_169_cov_0.866667_g36767_i0", "PRJEB55122", "37164", "169", "0.866667", "1.46466723", "Streptomyces sp. NPDC", "1931", "Bacteria", "Bacteria", "41.2", "0.0467", "", "NR", "WP_352195973.1", "3157228", "g36767", "i0", "44.4", "0.63905325443787", "36", "20", "63.9", "0", "12", "119", "235", "270", "WP_352195973.1 glycosyltransferase family 1 protein [Streptomyces sp. NPDC097619]", "diamond", "108", "41.2", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Kitasatosporales", "Streptomycetaceae", "Streptomyces", "Streptomyces sp. NPDC097619"], [27760456, "PRJEB55122_P_NODE_37944_length_168_cov_0.873950_g37547_i0", "PRJEB55122", "37944", "168", "0.87395", "1.468236", "Rhodococcoides fascians", "1828", "Bacteria", "Bacteria", "114", "1.71e-28", "", "NR", "WP_032371897.1", "1828", "g37547", "i0", "98.2", "0.982142857142857", "55", "1", "98.2", "0", "166", "2", "336", "390", "WP_032371897.1 tyrosine-type recombinase/integrase [Rhodococcoides fascians]", "diamond", "165", "114", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Mycobacteriales", "Nocardiaceae", "Rhodococcoides", "Rhodococcoides fascians"], [28549697, "PRJEB55122_P_NODE_40367_length_165_cov_0.896552_g39970_i0", "PRJEB55122", "40367", "165", "0.896552", "1.4793108", "Microbacterium sp. oral taxon 186", "712383", "Bacteria", "Bacteria", "85.9", "3.17e-18", "", "NR", "WP_005048760.1", "712383", "g39970", "i0", "100", "0.8", "44", "0", "80", "0", "2", "133", "285", "328", "WP_005048760.1 aldo/keto reductase [Microbacterium sp. oral taxon 186]", "diamond", "132", "85.9", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Micrococcales", "Microbacteriaceae", "Microbacterium", "Microbacterium sp. oral taxon 186"], [28581184, "PRJEB55122_P_NODE_41807_length_164_cov_0.904348_g41410_i0", "PRJEB55122", "41807", "164", "0.904348", "1.48313072", "Cutibacterium avidum", "33010", "Bacteria", "Bacteria", "47.4", "2.98e-4", "", "NR", "MDU3749855.1", "33010", "g41410", "i0", "42", "3.65853658536585", "50", "29", "91.5", "0", "164", "15", "375", "424", "MDU3749855.1 TraM recognition domain-containing protein [Cutibacterium avidum]", "diamond", "600", "47.4", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Propionibacteriales", "Propionibacteriaceae", "Cutibacterium", "Cutibacterium avidum"], [28889969, "PRJEB55122_P_NODE_42268_length_163_cov_0.912281_g41871_i0", "PRJEB55122", "42268", "163", "0.912281", "1.48701803", "Corynebacterium", "1716", "Bacteria", "Bacteria", "102", "3.58e-24", "", "NR", "WP_005388495.1", "39791", "g41871", "i0", "94.4", "2.98159509202454", "54", "3", "99.4", "0", "2", "163", "250", "303", "WP_005388495.1 YibE/F family protein [Corynebacterium glucuronolyticum]", "diamond", "486", "102", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Mycobacteriales", "Corynebacteriaceae", "Corynebacterium", "Corynebacterium glucuronolyticum"], [28896693, "PRJEB55122_P_NODE_38428_length_167_cov_0.881356_g38031_i0", "PRJEB55122", "38428", "167", "0.881356", "1.47186452", "Leifsonia sp. TF", "1870902", "Bacteria", "Bacteria", "120", "9.4e-31", "", "NR", "WP_208040083.1", "2815212", "g38031", "i0", "100", "0.988023952095808", "55", "0", "98.8", "0", "165", "1", "218", "272", "WP_208040083.1 glycosyltransferase family 4 protein [Leifsonia sp. TF02-11]", "diamond", "165", "120", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Micrococcales", "Microbacteriaceae", "Leifsonia", "Leifsonia sp. TF02-11"], [29086398, "PRJEB55122_P_NODE_40588_length_165_cov_0.896552_g40191_i0", "PRJEB55122", "40588", "165", "0.896552", "1.4793108", "Luteococcus sp.", "1969402", "Bacteria", "Bacteria", "110", "9.21e-27", "", "NR", "WP_394275493.1", "1969402", "g40191", "i0", "98.1", "0.981818181818182", "54", "1", "98.2", "0", "2", "163", "126", "179", "WP_394275493.1 sugar transferase [Luteococcus sp.]", "diamond", "162", "110", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Propionibacteriales", "Propionibacteriaceae", "Luteococcus", "Luteococcus sp."], [29591068, "PRJEB55122_P_NODE_40510_length_165_cov_0.896552_g40113_i0", "PRJEB55122", "40510", "165", "0.896552", "1.4793108", "Bifidobacteriaceae bacterium MCC", "2291324", "Bacteria", "Bacteria", "40", "0.0236", "", "NR", "GDZ53054.1", "2569517", "g40113", "i0", "57.1", "0.636363636363636", "35", "15", "63.6", "0", "28", "132", "12", "46", "GDZ53054.1 hypothetical protein MCC02035_17470 [Bifidobacteriaceae bacterium MCC02035]", "diamond", "105", "40", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Bifidobacteriales", "Bifidobacteriaceae", null, "Bifidobacteriaceae bacterium MCC02035"], [29622543, "PRJEB55122_P_NODE_40310_length_165_cov_0.896552_g39913_i0", "PRJEB55122", "40310", "165", "0.896552", "1.4793108", "unclassified Luteococcus", "2639923", "Bacteria", "Bacteria", "93.6", "9.25e-21", "", "NR", "WP_342090188.1", "2639923", "g39913", "i0", "77.8", "1.96363636363636", "54", "12", "98.2", "0", "163", "2", "176", "229", "WP_342090188.1 MULTISPECIES: glycoside hydrolase family 32 protein [unclassified Luteococcus]", "diamond", "324", "93.6", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Propionibacteriales", "Propionibacteriaceae", "Luteococcus", null], [29622544, "PRJEB55122_P_NODE_42750_length_163_cov_0.912281_g42353_i0", "PRJEB55122", "42750", "163", "0.912281", "1.48701803", "Luteococcus sp.", "1969402", "Bacteria", "Bacteria", "58.5", "2.7e-8", "", "NR", "WP_394277338.1", "1969402", "g42353", "i0", "100", "0.496932515337423", "27", "0", "49.7", "0", "154", "74", "1", "27", "WP_394277338.1 Bax inhibitor-1/YccA family membrane protein [Luteococcus sp.]", "diamond", "81", "58.5", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Propionibacteriales", "Propionibacteriaceae", "Luteococcus", "Luteococcus sp."], [29970374, "PRJEB55122_P_NODE_43991_length_159_cov_2.454545_g43594_i0", "PRJEB55122", "43991", "159", "2.454545", "3.90272655", "Streptomyces sp. A1499", "2563104", "Bacteria", "Bacteria", "43.1", "0.00854", "", "NR", "THC52570.1", "2563104", "g43594", "i0", "60.6", "0.622641509433962", "33", "12", "62.3", "1", "113", "15", "28", "59", "THC52570.1 tryptophan synthase subunit alpha [Streptomyces sp. A1499]", "diamond", "99", "43.1", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Kitasatosporales", "Streptomycetaceae", "Streptomyces", "Streptomyces sp. A1499"], [30128073, "PRJEB55122_P_NODE_43232_length_162_cov_0.920354_g42835_i0", "PRJEB55122", "43232", "162", "0.920354", "1.49097348", "Mobilicoccus caccae", "1859295", "Bacteria", "Bacteria", "90.1", "2.46e-19", "", "NR", "WP_284305203.1", "1859295", "g42835", "i0", "79.2", "0.981481481481482", "53", "11", "98.1", "0", "160", "2", "284", "336", "WP_284305203.1 gamma-glutamyltransferase [Mobilicoccus caccae]", "diamond", "159", "90.1", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Micrococcales", "Dermatophilaceae", "Mobilicoccus", "Mobilicoccus caccae"], [30570432, "PRJEB55122_P_NODE_34813_length_174_cov_2.096000_g34416_i0", "PRJEB55122", "34813", "174", "2.096", "3.64704", "Streptomyces longispororuber", "68230", "Bacteria", "Bacteria", "41.6", "0.00759", "", "NR", "WP_391884628.1", "68230", "g34416", "i0", "44.8", "1", "58", "30", "96.6", "1", "168", "1", "2", "59", "WP_391884628.1 hypothetical protein [Streptomyces longispororuber]", "diamond", "174", "41.6", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Kitasatosporales", "Streptomycetaceae", "Streptomyces", "Streptomyces longispororuber"], [30570433, "PRJEB55122_P_NODE_38193_length_167_cov_1.669492_g37796_i0", "PRJEB55122", "38193", "167", "1.669492", "2.78805164", "Lawsonella", "1847725", "Bacteria", "Bacteria", "114", "1.46e-28", "", "NR", "WP_290595271.1", "1847725", "g37796", "i0", "100", "0.988023952095808", "55", "0", "98.8", "0", "3", "167", "155", "209", "WP_290595271.1 MULTISPECIES: bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD [Lawsonella]", "diamond", "165", "114", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Mycobacteriales", "Lawsonellaceae", "Lawsonella", null], [30665448, "PRJEB55122_P_NODE_43293_length_162_cov_0.920354_g42896_i0", "PRJEB55122", "43293", "162", "0.920354", "1.49097348", "Propionibacteriaceae bacterium", "2021380", "Bacteria", "Bacteria", "89", "2.91e-19", "", "NR", "HEX2857889.1", "2021380", "g42896", "i0", "84.6", "2.87037037037037", "52", "8", "96.3", "0", "5", "160", "137", "188", "HEX2857889.1 polyprenyl synthetase family protein [Propionibacteriaceae bacterium]", "diamond", "465", "89", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Propionibacteriales", "Propionibacteriaceae", null, "Propionibacteriaceae bacterium"], [31234046, "PRJEB55122_P_NODE_39375_length_166_cov_0.888889_g38978_i0", "PRJEB55122", "39375", "166", "0.888889", "1.47555574", "Gaiellaceae bacterium", "2838783", "Bacteria", "Bacteria", "67.4", "7.88e-13", "", "NR", "HEX2495233.1", "2838783", "g38978", "i0", "84.6", "0.704819277108434", "39", "6", "70.5", "0", "166", "50", "60", "98", "HEX2495233.1 hypothetical protein [Gaiellaceae bacterium]", "diamond", "117", "67.4", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Thermoleophilia", "Gaiellales", "Gaiellaceae", null, "Gaiellaceae bacterium"], [31866651, "PRJEB55122_P_NODE_30457_length_190_cov_1.475177_g30060_i0", "PRJEB55122", "30457", "190", "1.475177", "2.8028363", "Brachybacterium muris", "219301", "Bacteria", "Bacteria", "120", "3.11e-32", "", "NR", "WP_237738762.1", "219301", "g30060", "i0", "100", "0.994736842105263", "63", "0", "99.5", "0", "189", "1", "130", "192", "WP_237738762.1 lysoplasmalogenase family protein [Brachybacterium muris]", "diamond", "189", "120", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Micrococcales", "Dermabacteraceae", "Brachybacterium", "Brachybacterium muris"], [32056641, "PRJEB55122_P_NODE_6398_length_559_cov_2.392157_g6013_i0", "PRJEB55122", "6398", "559", "2.392157", "13.37215763", "Streptomyces sp. NPDC", "1931", "Bacteria", "Bacteria", "45.4", "0.0366", "", "NR", "WP_390148821.1", "3346311", "g6013", "i0", "29", "0.98211091234347", "183", "91", "86.9", "10", "57", "542", "3", "167", "WP_390148821.1 sigma factor-like helix-turn-helix DNA-binding protein [Streptomyces sp. NPDC058045]", "diamond", "549", "45.4", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Kitasatosporales", "Streptomycetaceae", "Streptomyces", "Streptomyces sp. NPDC058045"], [32176683, "PRJEB55122_P_NODE_43178_length_162_cov_0.920354_g42781_i0", "PRJEB55122", "43178", "162", "0.920354", "1.49097348", "Luteococcus", "33983", "Bacteria", "Bacteria", "102", "1.65e-24", "", "NR", "WP_123576108.1", "33984", "g42781", "i0", "96.2", "2.92592592592593", "52", "2", "96.3", "0", "6", "161", "94", "145", "WP_123576108.1 GDP-L-fucose synthase family protein [Luteococcus japonicus]", "diamond", "474", "103", "0.990291262135922", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Propionibacteriales", "Propionibacteriaceae", "Luteococcus", "Luteococcus japonicus"], [32246859, "PRJEB55122_P_NODE_36618_length_169_cov_0.866667_g36221_i0", "PRJEB55122", "36618", "169", "0.866667", "1.46466723", "Agilicoccus flavus", "2775968", "Bacteria", "Bacteria", "60.8", "4.7e-9", "", "NR", "WP_226345527.1", "2775968", "g36221", "i0", "76.7", "0.763313609467456", "43", "10", "76.3", "0", "168", "40", "264", "306", "WP_226345527.1 patatin-like phospholipase family protein [Agilicoccus flavus]", "diamond", "129", "60.8", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Micrococcales", "Dermatophilaceae", "Agilicoccus", "Agilicoccus flavus"], [32341649, "PRJEB55122_P_NODE_39019_length_166_cov_2.709402_g38622_i0", "PRJEB55122", "39019", "166", "2.709402", "4.49760732", "Catellatospora aurea", "1337874", "Bacteria", "Bacteria", "40.8", "0.0407", "", "NR", "WP_376810015.1", "1337874", "g38622", "i0", "39.3", "1.01204819277108", "56", "27", "99.4", "3", "2", "166", "63", "112", "WP_376810015.1 hypothetical protein [Catellatospora aurea]", "diamond", "168", "40.8", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Micromonosporales", "Micromonosporaceae", "Catellatospora", "Catellatospora aurea"], [32625799, "PRJEB55122_P_NODE_38580_length_167_cov_0.881356_g38183_i0", "PRJEB55122", "38580", "167", "0.881356", "1.47186452", "Micromonospora sp. NBC_", "1876", "Bacteria", "Bacteria", "42.7", "0.0137", "", "NR", "WP_329105020.1", "2975984", "g38183", "i0", "51.4", "0.62874251497006", "35", "17", "62.9", "0", "48", "152", "1628", "1662", "WP_329105020.1 LamG-like jellyroll fold domain-containing protein [Micromonospora sp. NBC_01699]", "diamond", "105", "42.7", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Micromonosporales", "Micromonosporaceae", "Micromonospora", "Micromonospora sp. NBC_01699"]], "truncated": false, "filtered_table_rows_count": 26, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "diamond", "p1": "PRJEB55122", "p2": "Actinomycetota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJEB55122&tax_phylum=Actinomycetota", "results": [{"value": "PRJEB55122", "label": "PRJEB55122", "count": 26, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&tax_phylum=Actinomycetota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJEB55122&tax_phylum=Actinomycetota", "results": [{"value": "diamond", "label": "diamond", "count": 26, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJEB55122&tax_phylum=Actinomycetota", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJEB55122&tax_phylum=Actinomycetota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 26, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJEB55122&tax_phylum=Actinomycetota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJEB55122&tax_phylum=Actinomycetota", "results": [], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJEB55122&tax_phylum=Actinomycetota", "results": [{"value": "Bacillati", "label": "Bacillati", "count": 26, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJEB55122&tax_phylum=Actinomycetota&tax_kingdom=Bacillati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJEB55122&tax_phylum=Actinomycetota", "results": [{"value": "Actinomycetota", "label": "Actinomycetota", "count": 26, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJEB55122", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 202.6667850004742}