{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"diamond\", bioproject = \"PRJEB20058\" and tax_kingdom = \"Fusobacteriati\"", "rows": [[25748216, "PRJEB20058_P_NODE_106842_length_392_cov_1.166163_g104034_i0", "PRJEB20058", "106842", "392", "1.166163", "4.57135896", "Fusobacteriota bacterium", "2060921", "Bacteria", "Bacteria", "125", "1.8099999999999999e-31", "", "NR", "KAF0091675.1", "2060921", "g104034", "i0", "80.8", "0.558673469387755", "73", "14", "55.9", "0", "166", "384", "6", "78", "KAF0091675.1 MAG: diaminohydroxyphosphoribosylaminopyrimidine deaminase [Fusobacteriota bacterium]", "diamond", "219", "125", "1", "Bacteria", null, "Fusobacteriati", "Fusobacteriota", null, null, null, null, "Fusobacteriota bacterium"], [26058187, "PRJEB20058_P_NODE_127981_length_349_cov_11.809028_g125162_i0", "PRJEB20058", "127981", "349", "11.809028", "41.21350772", "Bacteria", "2", "Bacteria", "Bacteria", "70.1", "3.36e-11", "", "NR", "OQY08877.1", "1971640", "g125162", "i0", "34.3", "6.24928366762178", "108", "71", "92.8", "0", "1", "324", "635", "742", "OQY08877.1 MAG: hypothetical protein B6I28_04040 [Fusobacteriia bacterium 4572_132]", "diamond", "2181", "70.1", "1", "Bacteria", null, "Fusobacteriati", "Fusobacteriota", "Fusobacteriia", null, null, null, "Fusobacteriia bacterium 4572_132"], [26194484, "PRJEB20058_P_NODE_127190_length_351_cov_1.493103_g124371_i0", "PRJEB20058", "127190", "351", "1.493103", "5.24079153", "Bacteria", "2", "Bacteria", "Bacteria", "110", "1.39e-26", "", "NR", "MBZ4683887.1", "2044942", "g124371", "i0", "81.3", "2.18803418803419", "64", "12", "54.7", "0", "193", "2", "105", "168", "MBZ4683887.1 pyridoxal phosphate synthase yaaD subunit [Fusobacteriales bacterium]", "diamond", "768", "110", "1", "Bacteria", null, "Fusobacteriati", "Fusobacteriota", "Fusobacteriia", "Fusobacteriales", null, null, "Fusobacteriales bacterium"], [32910671, "PRJEB20058_P_NODE_155745_length_305_cov_19.196721_g152922_i0", "PRJEB20058", "155745", "305", "19.196721", "58.54999905", "Leptotrichiaceae bacterium", "2782225", "Bacteria", "Bacteria", "91.3", "3.47e-20", "", "NR", "MBP6125816.1", "2782225", "g152922", "i0", "72.2", "0.531147540983607", "54", "15", "53.1", "0", "7", "168", "76", "129", "MBP6125816.1 membrane protein insertase YidC [Leptotrichiaceae bacterium]", "diamond", "162", "91.3", "1", "Bacteria", null, "Fusobacteriati", "Fusobacteriota", "Fusobacteriia", "Fusobacteriales", "Leptotrichiaceae", null, "Leptotrichiaceae bacterium"], [32944794, "PRJEB20058_P_NODE_129514_length_346_cov_500.129825_g126695_i0", "PRJEB20058", "129514", "346", "500.129825", "1730.4491945", "Fusobacterium necrophorum", "859", "Bacteria", "Bacteria", "188", "2e-59", "", "NR", "WP_285056812.1", "859", "g126695", "i0", "99", "0.841040462427746", "97", "1", "84.1", "0", "292", "2", "16", "112", "WP_285056812.1 metal-dependent transcriptional regulator [Fusobacterium necrophorum]", "diamond", "291", "188", "1", "Bacteria", null, "Fusobacteriati", "Fusobacteriota", "Fusobacteriia", "Fusobacteriales", "Fusobacteriaceae", "Fusobacterium", "Fusobacterium necrophorum"], [32957351, "PRJEB20058_P_NODE_42746_length_643_cov_7.134021_g40082_i0", "PRJEB20058", "42746", "643", "7.134021", "45.87175503", "Bacteria", "2", "Bacteria", "Bacteria", "59.3", "2.69e-6", "", "NR", "WP_285061131.1", "859", "g40082", "i0", "39.4", "1.89424572317263", "94", "51", "43.4", "3", "469", "191", "121", "209", "WP_285061131.1 terminase large subunit domain-containing protein [Fusobacterium necrophorum]", "diamond", "1218", "59.3", "1", "Bacteria", null, "Fusobacteriati", "Fusobacteriota", "Fusobacteriia", "Fusobacteriales", "Fusobacteriaceae", "Fusobacterium", "Fusobacterium necrophorum"], [32980173, "PRJEB20058_P_NODE_90507_length_432_cov_1.439353_g87709_i0", "PRJEB20058", "90507", "432", "1.439353", "6.21800496", "unclassified Cetobacterium", "2630983", "Bacteria", "Bacteria", "174", "3.37e-51", "", "NR", "WP_081982672.1", "2630983", "g87709", "i0", "100", "0.645833333333333", "93", "0", "64.6", "0", "431", "153", "193", "285", "WP_081982672.1 MULTISPECIES: sugar ABC transporter permease [unclassified Cetobacterium]", "diamond", "279", "174", "1", "Bacteria", null, "Fusobacteriati", "Fusobacteriota", "Fusobacteriia", "Fusobacteriales", "Fusobacteriaceae", "Cetobacterium", null], [32991486, "PRJEB20058_P_NODE_234795_length_226_cov_3.193939_g231970_i0", "PRJEB20058", "234795", "226", "3.193939", "7.21830214", "root", "1", "Root_unresolved", "Root_unresolved", "42.7", "0.0065", "", "NR", "WP_187105728.1", "859", "g231970", "i0", "58", "1.2212389380531", "50", "19", "63.7", "1", "207", "64", "39", "88", "WP_187105728.1 hypothetical protein, partial [Fusobacterium necrophorum]", "diamond", "276", "42.7", "1", "Bacteria", null, "Fusobacteriati", "Fusobacteriota", "Fusobacteriia", "Fusobacteriales", "Fusobacteriaceae", "Fusobacterium", "Fusobacterium necrophorum"], [32996397, "PRJEB20058_P_NODE_194619_length_260_cov_8.904523_g191795_i0", "PRJEB20058", "194619", "260", "8.904523", "23.1517598", "Pseudostreptobacillus hongkongensis", "1162717", "Bacteria", "Bacteria", "118", "1.43e-31", "", "NR", "WP_066895366.1", "1162717", "g191795", "i0", "88.4", "0.796153846153846", "69", "8", "79.6", "0", "207", "1", "5", "73", "WP_066895366.1 translation initiation factor IF-3 [Pseudostreptobacillus hongkongensis]", "diamond", "207", "118", "1", "Bacteria", null, "Fusobacteriati", "Fusobacteriota", "Fusobacteriia", "Fusobacteriales", "Leptotrichiaceae", "Pseudostreptobacillus", "Pseudostreptobacillus hongkongensis"], [32997082, "PRJEB20058_P_NODE_93043_length_425_cov_2.151099_g90243_i0", "PRJEB20058", "93043", "425", "2.151099", "9.14217075", "Haliovirga abyssi", "2996794", "Bacteria", "Bacteria", "180", "6.08e-51", "", "NR", "WP_307904538.1", "2996794", "g90243", "i0", "79.2", "1.49647058823529", "106", "22", "74.8", "0", "3", "320", "420", "525", "WP_307904538.1 biosynthetic-type acetolactate synthase large subunit [Haliovirga abyssi]", "diamond", "636", "180", "1", "Bacteria", null, "Fusobacteriati", "Fusobacteriota", "Fusobacteriia", "Fusobacteriales", "Haliovirgaceae", "Haliovirga", "Haliovirga abyssi"], [33025633, "PRJEB20058_P_NODE_61180_length_535_cov_20.204641_g58418_i0", "PRJEB20058", "61180", "535", "20.204641", "108.09482935", "FCB group", "1783270", "Bacteria", "Bacteria", "190", "9.49e-56", "", "NR", "WP_047396600.1", "1339239", "g58418", "i0", "100", "1.64859813084112", "98", "0", "55", "0", "302", "9", "1", "98", "WP_047396600.1 replication initiation protein [Cetobacterium sp. ZOR0034]", "diamond", "882", "190", "1", "Bacteria", null, "Fusobacteriati", "Fusobacteriota", "Fusobacteriia", "Fusobacteriales", "Fusobacteriaceae", "Cetobacterium", "Cetobacterium sp. ZOR0034"], [33030687, "PRJEB20058_P_NODE_207684_length_251_cov_0.936842_g204860_i0", "PRJEB20058", "207684", "251", "0.936842", "2.35147342", "unclassified Cetobacterium", "2630983", "Bacteria", "Bacteria", "145", "8.139999999999997e-42", "", "NR", "WP_047381160.1", "2630983", "g204860", "i0", "98.7", "0.920318725099602", "77", "1", "92", "0", "21", "251", "1", "77", "WP_047381160.1 MULTISPECIES: chorismate mutase [unclassified Cetobacterium]", "diamond", "231", "145", "1", "Bacteria", null, "Fusobacteriati", "Fusobacteriota", "Fusobacteriia", "Fusobacteriales", "Fusobacteriaceae", "Cetobacterium", null], [33030870, "PRJEB20058_P_NODE_242492_length_210_cov_4.765101_g239667_i0", "PRJEB20058", "242492", "210", "4.765101", "10.0067121", "Fusobacterium periodonticum", "860", "Bacteria", "Bacteria", "98.6", "5.24e-22", "", "NR", "WP_005966283.1", "860", "g239667", "i0", "86.9", "0.871428571428571", "61", "8", "87.1", "0", "184", "2", "127", "187", "WP_005966283.1 UvrD-helicase domain-containing protein [Fusobacterium periodonticum]", "diamond", "183", "98.6", "1", "Bacteria", null, "Fusobacteriati", "Fusobacteriota", "Fusobacteriia", "Fusobacteriales", "Fusobacteriaceae", "Fusobacterium", "Fusobacterium periodonticum"], [33064488, "PRJEB20058_P_NODE_170693_length_286_cov_16.311111_g167870_i0", "PRJEB20058", "170693", "286", "16.311111", "46.64977746", "Streptobacillus canis", "2678686", "Bacteria", "Bacteria", "105", "2.77e-25", "", "NR", "WP_156299308.1", "2678686", "g167870", "i0", "65.8", "0.797202797202797", "76", "26", "79.7", "0", "56", "283", "146", "221", "WP_156299308.1 site-2 protease family protein [Streptobacillus canis]", "diamond", "228", "105", "1", "Bacteria", null, "Fusobacteriati", "Fusobacteriota", "Fusobacteriia", "Fusobacteriales", "Leptotrichiaceae", "Streptobacillus", "Streptobacillus canis"], [33081572, "PRJEB20058_P_NODE_178438_length_278_cov_0.976959_g175615_i0", "PRJEB20058", "178438", "278", "0.976959", "2.71594602", "Fusobacterium naviforme", "77917", "Bacteria", "Bacteria", "182", "5.759999999999999e-57", "", "NR", "KAB0577826.1", "77917", "g175615", "i0", "97.8", "0.982014388489209", "91", "2", "98.2", "0", "273", "1", "55", "145", "KAB0577826.1 YbaK/EbsC family protein [Fusobacterium naviforme]", "diamond", "273", "182", "1", "Bacteria", null, "Fusobacteriati", "Fusobacteriota", "Fusobacteriia", "Fusobacteriales", "Fusobacteriaceae", "Fusobacterium", "Fusobacterium naviforme"], [33081940, "PRJEB20058_P_NODE_239558_length_216_cov_6.993548_g236733_i0", "PRJEB20058", "239558", "216", "6.993548", "15.10606368", "Fusobacterium sp. oral taxon 37", "68766", "Bacteria", "Bacteria", "65.1", "3.73e-12", "", "NR", "WP_158306654.1", "712288", "g236733", "i0", "53.7", "0.75", "54", "25", "75", "0", "36", "197", "1", "54", "WP_158306654.1 hypothetical protein [Fusobacterium sp. oral taxon 370]", "diamond", "162", "65.1", "1", "Bacteria", null, "Fusobacteriati", "Fusobacteriota", "Fusobacteriia", "Fusobacteriales", "Fusobacteriaceae", "Fusobacterium", "Fusobacterium sp. oral taxon 370"], [33093841, "PRJEB20058_P_NODE_76694_length_474_cov_2.355932_g73916_i0", "PRJEB20058", "76694", "474", "2.355932", "11.16711768", "Bacteria", "2", "Bacteria", "Bacteria", "182", "2.68e-51", "", "NR", "WP_304178784.1", "109328", "g73916", "i0", "62.5", "4.82278481012658", "152", "51", "96.2", "3", "472", "17", "393", "538", "WP_304178784.1 hypothetical protein [Leptotrichia trevisanii]", "diamond", "2286", "183", "0.994535519125683", "Bacteria", null, "Fusobacteriati", "Fusobacteriota", "Fusobacteriia", "Fusobacteriales", "Leptotrichiaceae", "Leptotrichia", "Leptotrichia trevisanii"], [33132409, "PRJEB20058_P_NODE_108055_length_389_cov_4.161585_g105244_i0", "PRJEB20058", "108055", "389", "4.161585", "16.18856565", "Cetobacterium sp. ZWU", "2071632", "Bacteria", "Bacteria", "242", "2.01e-72", "", "NR", "WP_047384830.1", "1340502", "g105244", "i0", "100", "0.917737789203085", "119", "0", "91.8", "0", "19", "375", "333", "451", "WP_047384830.1 hypothetical protein [Cetobacterium sp. ZWU0022]", "diamond", "357", "242", "1", "Bacteria", null, "Fusobacteriati", "Fusobacteriota", "Fusobacteriia", "Fusobacteriales", "Fusobacteriaceae", "Cetobacterium", "Cetobacterium sp. ZWU0022"], [33149646, "PRJEB20058_P_NODE_147888_length_317_cov_1.390625_g145067_i0", "PRJEB20058", "147888", "317", "1.390625", "4.40828125", "Cetobacterium sp. ZOR", "2071632", "Bacteria", "Bacteria", "224", "3.26e-71", "", "NR", "WP_047395781.1", "1339239", "g145067", "i0", "100", "0.993690851735016", "105", "0", "99.4", "0", "317", "3", "150", "254", "WP_047395781.1 hypothetical protein [Cetobacterium sp. ZOR0034]", "diamond", "315", "224", "1", "Bacteria", null, "Fusobacteriati", "Fusobacteriota", "Fusobacteriia", "Fusobacteriales", "Fusobacteriaceae", "Cetobacterium", "Cetobacterium sp. ZOR0034"], [33161892, "PRJEB20058_P_NODE_248096_length_198_cov_9.204380_g245271_i0", "PRJEB20058", "248096", "198", "9.20438", "18.2246724", "Leptotrichia", "32067", "Bacteria", "Bacteria", "108", "1.1300000000000002e-27", "", "NR", "MBF1337602.1", "104608", "g245271", "i0", "91.7", "1.81818181818182", "60", "5", "90.9", "0", "180", "1", "79", "138", "MBF1337602.1 phosphoglucosamine mutase [Leptotrichia sp.]", "diamond", "360", "108", "1", "Bacteria", null, "Fusobacteriati", "Fusobacteriota", "Fusobacteriia", "Fusobacteriales", "Leptotrichiaceae", "Leptotrichia", "Leptotrichia sp."], [33166844, "PRJEB20058_P_NODE_173960_length_283_cov_1.153153_g171137_i0", "PRJEB20058", "173960", "283", "1.153153", "3.26342299", "Fusobacterium naviforme", "77917", "Bacteria", "Bacteria", "124", "3.5600000000000004e-33", "", "NR", "KAB0577559.1", "77917", "g171137", "i0", "100", "0.657243816254417", "62", "0", "65.7", "0", "261", "76", "161", "222", "KAB0577559.1 L-serine ammonia-lyase, iron-sulfur-dependent, subunit beta [Fusobacterium naviforme]", "diamond", "186", "124", "1", "Bacteria", null, "Fusobacteriati", "Fusobacteriota", "Fusobacteriia", "Fusobacteriales", "Fusobacteriaceae", "Fusobacterium", "Fusobacterium naviforme"], [33167153, "PRJEB20058_P_NODE_231152_length_230_cov_8.319527_g228327_i0", "PRJEB20058", "231152", "230", "8.319527", "19.1349121", "Fusobacterium pseudoperiodonticum", "2663009", "Bacteria", "Bacteria", "103", "6.330000000000001e-27", "", "NR", "WP_314320536.1", "2663009", "g228327", "i0", "90.7", "1.40869565217391", "54", "5", "70.4", "0", "209", "48", "18", "71", "WP_314320536.1 GIY-YIG nuclease family protein [Fusobacterium pseudoperiodonticum]", "diamond", "324", "103", "1", "Bacteria", null, "Fusobacteriati", "Fusobacteriota", "Fusobacteriia", "Fusobacteriales", "Fusobacteriaceae", "Fusobacterium", "Fusobacterium pseudoperiodonticum"], [33167183, "PRJEB20058_P_NODE_237296_length_221_cov_5.681250_g234471_i0", "PRJEB20058", "237296", "221", "5.68125", "12.5555625", "Pseudoleptotrichia goodfellowii", "157692", "Bacteria", "Bacteria", "63.5", "1.4e-11", "", "NR", "MBF4805340.1", "157692", "g234471", "i0", "67.4", "1.91402714932127", "43", "14", "58.4", "0", "61", "189", "1", "43", "MBF4805340.1 hypothetical protein [Pseudoleptotrichia goodfellowii]", "diamond", "423", "63.5", "1", "Bacteria", null, "Fusobacteriati", "Fusobacteriota", "Fusobacteriia", "Fusobacteriales", "Leptotrichiaceae", "Pseudoleptotrichia", "Pseudoleptotrichia goodfellowii"]], "truncated": false, "filtered_table_rows_count": 23, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_kingdom\" = :p2 order by rowid limit 101", "params": {"p0": "diamond", "p1": "PRJEB20058", "p2": "Fusobacteriati"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJEB20058&tax_kingdom=Fusobacteriati", "results": [{"value": "PRJEB20058", "label": "PRJEB20058", "count": 23, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&tax_kingdom=Fusobacteriati", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJEB20058&tax_kingdom=Fusobacteriati", "results": [{"value": "diamond", "label": "diamond", "count": 23, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJEB20058&tax_kingdom=Fusobacteriati", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJEB20058&tax_kingdom=Fusobacteriati", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 23, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJEB20058&tax_kingdom=Fusobacteriati&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJEB20058&tax_kingdom=Fusobacteriati", "results": [], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJEB20058&tax_kingdom=Fusobacteriati", "results": [{"value": "Fusobacteriati", "label": "Fusobacteriati", "count": 23, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJEB20058", "selected": true}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJEB20058&tax_kingdom=Fusobacteriati", "results": [{"value": "Fusobacteriota", "label": "Fusobacteriota", "count": 23, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJEB20058&tax_kingdom=Fusobacteriati&tax_phylum=Fusobacteriota", "selected": false}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 381.63395899937314}