{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"diamond\", bioproject = \"PRJEB14175\" and tax_phylum = \"Chlamydiota\"", "rows": [[25504886, "PRJEB14175_P_NODE_183609_length_241_cov_7.305556_g181342_i0", "PRJEB14175", "183609", "241", "7.305556", "17.60638996", "Bacteria", "2", "Bacteria", "Bacteria", "110", "5.01e-26", "", "NR", "PIS02500.1", "1973936", "g181342", "i0", "70.6", "1.6804979253112", "68", "20", "84.6", "0", "220", "17", "173", "240", "PIS02500.1 MAG: RIP metalloprotease RseP [Chlamydiae bacterium CG10_big_fil_rev_8_21_14_0_10_42_34]", "diamond", "405", "110", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", null, null, null, null, "Chlamydiae bacterium CG10_big_fil_rev_8_21_14_0_10_42_34"], [26463905, "PRJEB14175_P_NODE_7376_length_1281_cov_3.527869_g6195_i0", "PRJEB14175", "7376", "1281", "3.527869", "45.19200189", "Parachlamydiaceae bacterium", "2052176", "Bacteria", "Bacteria", "127", "1.09e-30", "", "NR", "MBA3238123.1", "2052176", "g6195", "i0", "75.3", "0.199063231850117", "85", "19", "19.4", "1", "58", "306", "95", "179", "MBA3238123.1 elongation factor P hydroxylase [Parachlamydiaceae bacterium]", "diamond", "255", "127", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Parachlamydiaceae", null, "Parachlamydiaceae bacterium"], [32908853, "PRJEB14175_P_NODE_178209_length_246_cov_7.367568_g175942_i0", "PRJEB14175", "178209", "246", "7.367568", "18.12421728", "Parachlamydia sp.", "2052048", "Bacteria", "Bacteria", "72", "4.39e-13", "", "NR", "PJD95796.1", "2052048", "g175942", "i0", "65.3", "1.81707317073171", "49", "17", "59.8", "0", "97", "243", "1", "49", "PJD95796.1 MAG: hypothetical protein CK425_07785 [Parachlamydia sp.]", "diamond", "447", "72", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Parachlamydiaceae", "Parachlamydia", "Parachlamydia sp."], [32956875, "PRJEB14175_P_NODE_196474_length_231_cov_1.505882_g194207_i0", "PRJEB14175", "196474", "231", "1.505882", "3.47858742", "PVC group", "1783257", "Bacteria", "Bacteria", "72.8", "4.95e-13", "", "NR", "WP_013944025.1", "83561", "g194207", "i0", "56", "3.92207792207792", "50", "22", "64.9", "0", "22", "171", "259", "308", "WP_013944025.1 signal recognition particle-docking protein FtsY [Simkania negevensis]", "diamond", "906", "73.2", "0.994535519125683", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Simkaniaceae", "Simkania", "Simkania negevensis"], [32961253, "PRJEB14175_P_NODE_29162_length_688_cov_1.266348_g27092_i0", "PRJEB14175", "29162", "688", "1.266348", "8.71247424", "Chlamydiales bacterium", "2047757", "Bacteria", "Bacteria", "201", "9.88e-60", "", "NR", "MCH9625611.1", "2047757", "g27092", "i0", "52", "0.863372093023256", "198", "94", "85.9", "1", "683", "93", "88", "285", "MCH9625611.1 Cysteine desulfurase IscS [Chlamydiales bacterium]", "diamond", "594", "201", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Chlamydiales", null, null, "Chlamydiales bacterium"], [32976814, "PRJEB14175_P_NODE_110995_length_335_cov_47.992701_g108729_i0", "PRJEB14175", "110995", "335", "47.992701", "160.77554835", "Candidatus Neptunochlamydia sp. 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[Rhabdochlamydiaceae bacterium]", "diamond", "135", "82.8", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Candidatus Rhabdochlamydiaceae", null, "Rhabdochlamydiaceae bacterium"], [32995134, "PRJEB14175_P_NODE_266107_length_194_cov_15.263158_g263839_i0", "PRJEB14175", "266107", "194", "15.263158", "29.61052652", "Rhabdochlamydiaceae bacterium", "2047756", "Bacteria", "Bacteria", "105", "9.31e-26", "", "NR", "HEX4839997.1", "2047756", "g263839", "i0", "84.2", "2.64432989690722", "57", "9", "88.1", "0", "2", "172", "151", "207", "HEX4839997.1 1,4-dihydroxy-2-naphthoate octaprenyltransferase [Rhabdochlamydiaceae bacterium]", "diamond", "513", "105", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Candidatus Rhabdochlamydiaceae", null, "Rhabdochlamydiaceae bacterium"], [32995506, "PRJEB14175_P_NODE_60395_length_477_cov_20.826923_g58140_i0", "PRJEB14175", "60395", "477", "20.826923", "99.34442271", "Chlamydia psittaci", "83554", "Bacteria", "Bacteria", "54.3", "6.92e-7", "", "NR", "EPP28797.1", "1112246", "g58140", "i0", "95.7", "0.144654088050314", "23", "1", "14.5", "0", "456", "388", "1", "23", "EPP28797.1 hypothetical protein CP082626L3_1669, partial [Chlamydia psittaci 08-2626_L3]", "diamond", "69", "54.3", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Chlamydiales", "Chlamydiaceae", "Chlamydia", "Chlamydia psittaci"], [33012086, "PRJEB14175_P_NODE_245284_length_204_cov_3.797203_g243016_i0", "PRJEB14175", "245284", "204", "3.797203", "7.74629412", "Parachlamydiaceae bacterium", "2052176", "Bacteria", "Bacteria", "86.7", "1.27e-18", "", "NR", "MEI8125483.1", "2052176", "g243016", "i0", "58.3", "0.882352941176471", "60", "25", "88.2", "0", "3", "182", "20", "79", "MEI8125483.1 hypothetical protein [Parachlamydiaceae bacterium]", "diamond", "180", "86.7", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Parachlamydiaceae", null, "Parachlamydiaceae bacterium"], [33028294, "PRJEB14175_P_NODE_151092_length_275_cov_7.322430_g148825_i0", "PRJEB14175", "151092", "275", "7.32243", "20.1366825", "Candidatus Protochlamydia naegleriophila", "389348", "Bacteria", "Bacteria", "96.3", "5.7500000000000005e-21", "", "NR", "WP_059060471.1", "389348", "g148825", "i0", "63.9", "0.905454545454545", "83", "30", "90.5", "0", "272", "24", "135", "217", "WP_059060471.1 hemolysin family protein [Candidatus Protochlamydia naegleriophila]", "diamond", "249", "96.3", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Parachlamydiaceae", "Candidatus Protochlamydia", "Candidatus Protochlamydia naegleriophila"], [33062306, "PRJEB14175_P_NODE_146077_length_281_cov_22.777273_g143810_i0", "PRJEB14175", "146077", "281", "22.777273", "64.00413713", "Rhabdochlamydiaceae bacterium", "2047756", "Bacteria", "Bacteria", "58.2", "2.14e-7", "", "NR", "HNA62607.1", "2047756", "g143810", "i0", "81.8", "0.65124555160142406", "33", "6", "35.2", "0", "123", "25", "11", "43", "HNA62607.1 ISL3 family transposase [Rhabdochlamydiaceae bacterium]", "diamond", "183", "58.2", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Candidatus Rhabdochlamydiaceae", null, "Rhabdochlamydiaceae bacterium"], [33079003, "PRJEB14175_P_NODE_107806_length_341_cov_110.871429_g105540_i0", "PRJEB14175", "107806", "341", "110.871429", "378.07157289", "Chlamydiales bacterium", "2047757", "Bacteria", "Bacteria", "69.7", "4.01e-11", "", "NR", "MDR2539955.1", "2047757", "g105540", "i0", "62.9", "0.545454545454545", "62", "23", "54.5", "0", "188", "3", "1", "62", "MDR2539955.1 ribonuclease R [Chlamydiales bacterium]", "diamond", "186", "69.7", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Chlamydiales", null, null, "Chlamydiales bacterium"], [33096105, "PRJEB14175_P_NODE_106310_length_344_cov_25.279152_g104044_i0", "PRJEB14175", "106310", "344", "25.279152", "86.96028288", "Rhabdochlamydiaceae bacterium", "2047756", "Bacteria", "Bacteria", "125", "1.6e-34", "", "NR", "HEY5234713.1", "2047756", "g104044", "i0", "65", "0.872093023255814", "100", "32", "85.5", "2", "26", "319", "27", "125", "HEY5234713.1 hypothetical protein [Rhabdochlamydiaceae bacterium]", "diamond", "300", "125", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Candidatus Rhabdochlamydiaceae", null, "Rhabdochlamydiaceae bacterium"], [33113301, "PRJEB14175_P_NODE_133247_length_299_cov_2.777311_g130980_i0", "PRJEB14175", "133247", "299", "2.777311", "8.30415989", "Rhabdochlamydiaceae bacterium", "2047756", "Bacteria", "Bacteria", "55.1", "2.01e-6", "", "NR", "HUD02351.1", "2047756", "g130980", "i0", "51.6", "0.642140468227425", "64", "28", "61.2", "2", "12", "194", "46", "109", "HUD02351.1 hypothetical protein [Rhabdochlamydiaceae bacterium]", "diamond", "192", "55.1", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Candidatus Rhabdochlamydiaceae", null, "Rhabdochlamydiaceae bacterium"], [33130307, "PRJEB14175_P_NODE_115959_length_326_cov_28.690566_g113693_i0", "PRJEB14175", "115959", "326", "28.690566", "93.53124516", "Chlamydiota bacterium", "2081524", "Bacteria", "Bacteria", "106", "4.06e-27", "", "NR", "MES2122733.1", "2081524", "g113693", "i0", "48.5", "0.947852760736196", "103", "48", "90.2", "1", "316", "23", "9", "111", "MES2122733.1 hypothetical protein [Chlamydiota bacterium]", "diamond", "309", "106", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", null, null, null, null, "Chlamydiota bacterium"], [33144514, "PRJEB14175_P_NODE_239791_length_206_cov_0.882759_g237523_i0", "PRJEB14175", "239791", "206", "0.882759", "1.81848354", "Candidatus Protochlamydia", "282132", "Bacteria", "Bacteria", "83.2", "1.05e-16", "", "NR", "WP_068470338.1", "1414722", "g237523", "i0", "59.7", "2.95631067961165", "67", "27", "97.6", "0", "202", "2", "343", "409", "WP_068470338.1 tyrosine--tRNA ligase [Candidatus Protochlamydia phocaeensis]", "diamond", "609", "84", "0.990476190476191", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Parachlamydiaceae", "Candidatus Protochlamydia", "Candidatus Protochlamydia phocaeensis"], [33148050, "PRJEB14175_P_NODE_192792_length_234_cov_1.479769_g190525_i0", "PRJEB14175", "192792", "234", "1.479769", "3.46265946", "Rhabdochlamydiaceae bacterium", "2047756", "Bacteria", "Bacteria", "50.8", "4.88e-5", "", "NR", "HEY2810533.1", "2047756", "g190525", "i0", "36.4", "0.846153846153846", "66", "42", "84.6", "0", "210", "13", "975", "1040", "HEY2810533.1 hypothetical protein [Rhabdochlamydiaceae bacterium]", "diamond", "198", "50.8", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Candidatus Rhabdochlamydiaceae", null, "Rhabdochlamydiaceae bacterium"], [33161323, "PRJEB14175_P_NODE_158400_length_267_cov_1.242718_g156133_i0", "PRJEB14175", "158400", "267", "1.242718", "3.31805706", "Bacteria", "2", "Bacteria", "Bacteria", "56.6", "6.06e-7", "", "NR", "OGN65457.1", "1797605", "g156133", "i0", "43.8", "9.23595505617978", "80", "41", "88.8", "2", "259", "23", "197", "273", "OGN65457.1 MAG: transposase [Chlamydiae bacterium RIFCSPHIGHO2_12_FULL_49_9]", "diamond", "2466", "57", "0.992982456140351", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", null, null, null, null, "Chlamydiae bacterium RIFCSPHIGHO2_12_FULL_49_9"], [33164450, "PRJEB14175_P_NODE_133056_length_299_cov_5.495798_g130789_i0", "PRJEB14175", "133056", "299", "5.495798", "16.43243602", "Rhabdochlamydiaceae bacterium", "2047756", "Bacteria", "Bacteria", "110", "6.1e-26", "", "NR", "HEY5259814.1", "2047756", "g130789", "i0", "59.3", "1.71571906354515", "81", "33", "81.3", "0", "276", "34", "278", "358", "HEY5259814.1 M3 family metallopeptidase [Rhabdochlamydiaceae bacterium]", "diamond", "513", "110", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Candidatus Rhabdochlamydiaceae", null, "Rhabdochlamydiaceae bacterium"], [33165992, "PRJEB14175_P_NODE_57536_length_490_cov_5.193473_g55285_i0", "PRJEB14175", "57536", "490", "5.193473", "25.4480177", "Chlamydiales bacterium", "2047757", "Bacteria", "Bacteria", "56.2", "8.55e-6", "", "NR", "HXF28773.1", "2047757", "g55285", "i0", "41.4", "1.21836734693878", "70", "35", "39.2", "1", "488", "297", "439", "508", "HXF28773.1 IS200/IS605 family accessory protein TnpB-related protein [Chlamydiales bacterium]", "diamond", "597", "56.2", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Chlamydiales", null, null, "Chlamydiales bacterium"]], "truncated": false, "filtered_table_rows_count": 22, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "diamond", "p1": "PRJEB14175", "p2": "Chlamydiota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJEB14175&tax_phylum=Chlamydiota", "results": [{"value": "PRJEB14175", "label": "PRJEB14175", "count": 22, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&tax_phylum=Chlamydiota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJEB14175&tax_phylum=Chlamydiota", "results": [{"value": "diamond", "label": "diamond", "count": 22, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJEB14175&tax_phylum=Chlamydiota", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJEB14175&tax_phylum=Chlamydiota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 22, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJEB14175&tax_phylum=Chlamydiota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJEB14175&tax_phylum=Chlamydiota", "results": [{"value": "PVC group", "label": "PVC group", "count": 22, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJEB14175&tax_phylum=Chlamydiota&tax_clade=PVC+group", "selected": false}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJEB14175&tax_phylum=Chlamydiota", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 22, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJEB14175&tax_phylum=Chlamydiota&tax_kingdom=Pseudomonadati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJEB14175&tax_phylum=Chlamydiota", "results": [{"value": "Chlamydiota", "label": "Chlamydiota", "count": 22, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJEB14175", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 289.3961399968248}