{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"blastn\", bioproject = \"PRJNA975724\" and tax_phylum = \"Chlorophyta\"", "rows": [[945694, "PRJNA975724_S_NODE_23981_length_369_cov_3.898649_g23800_i0", "PRJNA975724", "23981", "369", "3.898649", "14.38601481", "Auxenochlorella protothecoides", "3075", "Plants", "Plants", "82.4", "4.47e-11", "", "NTclustered", "gi|760444820|ref|XM_011401177.1|", "3075", "g23800", "i0", "92.857", "0.151761517615176", "56", "4", "15", "0", "1", "56", "2200", "2255", "Auxenochlorella protothecoides DEAD-box ATP-dependent RNA helicase 7 partial mRNA", "blastn", "56", "82.4", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Trebouxiophyceae", "Chlorellales", "Chlorellaceae", "Auxenochlorella", "Auxenochlorella protothecoides"], [946580, "PRJNA975724_S_NODE_57221_length_283_cov_25.614286_g57040_i0", "PRJNA975724", "57221", "283", "25.614286", "72.48842938", "Chloropicon roscoffensis", "1461544", "Plants", "Plants", "76.8", "1.55e-9", "", "NTclustered", "gi|2863412631|gb|CP145450.1|", "1461544", "g57040", "i0", "95.745", "14.8197879858657", "47", "2", "17", "0", "237", "283", "330791", "330745", "Chloropicon roscoffensis strain CCMP1998 chromosome 10", "blastn", "4194", "76.8", "1", "Eukaryota", null, "Viridiplantae", "Chlorophyta", "Chloropicophyceae", "Chloropicales", "Chloropicaceae", "Chloropicon", "Chloropicon roscoffensis"], [946683, "PRJNA975724_S_NODE_6141_length_499_cov_16.927230_g5962_i0", "PRJNA975724", "6141", "499", "16.92723", "84.4668777", "Volvox carteri", "3067", "Plants", "Plants", "139", "3.64e-28", "", "NTclustered", "gi|302853854|ref|XM_002958394.1|", "3068", "g5962", "i0", "82.39", "8.51703406813627", "159", "28", "32", "0", "312", "470", "392", "234", "Volvox carteri f. nagariensis uncharacterized protein (VOLCADRAFT_77934), mRNA", "blastn", "4250", "139", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Chlamydomonadales", "Volvocaceae", "Volvox", "Volvox carteri"], [4774003, "PRJNA975724_S_NODE_23424_length_371_cov_6.365772_g23243_i0", "PRJNA975724", "23424", "371", "6.365772", "23.61701412", "Microthamnion kuetzingianum", "34148", "Plants", "Plants", "206", "2.5599999999999994e-48", "", "NTclustered", "gi|2724824378|gb|PP746558.1|", "34148", "g23243", "i0", "79.73", "4.29919137466307", "296", "50", "78", "9", "2", "292", "1705", "1995", "Microthamnion kuetzingianum culture UTEX:318 mitochondrion, complete genome", "blastn", "1595", "206", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Trebouxiophyceae", "Microthamniales", "Microthamniaceae", "Microthamnion", "Microthamnion kuetzingianum"], [7644817, "PRJNA975724_S_NODE_2086_length_655_cov_5.163230_g1918_i0", "PRJNA975724", "2086", "655", "5.16323", "33.8191565", "Chaetophoropsis", "2505929", "Plants", "Plants", "87.9", "1.79e-12", "", "NTclustered", "gi|1834977237|ref|NC_047431.1|", "2079440", "g1918", "i0", "88.312", "2.42290076335878", "77", "4", "11", "5", "68", "142", "101129", "101056", "Chaetophoropsis polyrhiza chloroplast, complete genome", "blastn", "1587", "87.9", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Chaetophorales", "Chaetophoraceae", "Chaetophoropsis", "Chaetophoropsis polyrhiza"], [9874834, "PRJNA975724_S_NODE_61328_length_276_cov_2.275862_g61147_i0", "PRJNA975724", "61328", "276", "2.275862", "6.28137912", "Auxenochlorella protothecoides", "3075", "Plants", "Plants", "139", "1.8899999999999999e-28", "", "NTclustered", "gi|760439090|ref|XM_011398312.1|", "3075", "g61147", "i0", "82.317", "0.847826086956522", "164", "25", "59", "4", "24", "185", "193", "354", "Auxenochlorella protothecoides 60S ribosomal protein L32-1 partial mRNA", "blastn", "234", "139", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Trebouxiophyceae", "Chlorellales", "Chlorellaceae", "Auxenochlorella", "Auxenochlorella protothecoides"], [9875091, "PRJNA975724_S_NODE_7128_length_483_cov_40.948780_g6947_i0", "PRJNA975724", "7128", "483", "40.94878", "197.7826074", "Chlamydomonas reinhardtii", "3055", "Plants", "Plants", "285", "4.26e-72", "", "NTclustered", "gi|2082247947|ref|XM_001698013.2|", "3055", "g6947", "i0", "79.343", "6.93167701863354", "426", "72", "87", "14", "66", "483", "942", "525", "Chlamydomonas reinhardtii uncharacterized protein (CHLRE_06g278222v5), mRNA", "blastn", "3348", "285", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Chlamydomonadales", "Chlamydomonadaceae", "Chlamydomonas", "Chlamydomonas reinhardtii"], [11470690, "PRJNA975724_S_NODE_78629_length_251_cov_0.865169_g78448_i0", "PRJNA975724", "78629", "251", "0.865169", "2.17157419", "Eukaryota", "2759", "Plants", "Plants", "119", "2.21e-22", "", "NTclustered", "gi|760444576|ref|XM_011401055.1|", "3075", "g78448", "i0", "97.143", "4.04780876494024", "70", "2", "28", "0", "152", "221", "385", "316", "Auxenochlorella protothecoides Ubiquitin-60S ribosomal protein L40-2 partial mRNA", "blastn", "1016", "119", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Trebouxiophyceae", "Chlorellales", "Chlorellaceae", "Auxenochlorella", "Auxenochlorella protothecoides"], [12745985, "PRJNA975724_S_NODE_21110_length_381_cov_3.730519_g20929_i0", "PRJNA975724", "21110", "381", "3.730519", "14.21327739", "Eukaryota", "2759", "Plants", "Plants", "171", "9.61e-38", "", "NTclustered", "gi|1381389463|ref|NC_037449.1|", "1973153", "g20929", "i0", "78.388", "66.2965879265092", "273", "51", "71", "7", "29", "297", "20163", "20431", "Prototheca zopfii strain SAG 2063 mitochondrion, complete genome", "blastn", "25259", "172", "0.994186046511628", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Trebouxiophyceae", "Chlorellales", "Chlorellaceae", "Prototheca", "Prototheca ciferrii"], [13699604, "PRJNA975724_S_NODE_3391_length_573_cov_25.442000_g3215_i0", "PRJNA975724", "3391", "573", "25.442", "145.78266", "Chlamydomonas reinhardtii", "3055", "Plants", "Plants", "202", "5.3099999999999985e-47", "", "NTclustered", "gi|2082267188|ref|XM_043070972.1|", "3055", "g3215", "i0", "79.333", "7.06108202443281", "300", "53", "52", "8", "277", "573", "432", "139", "Chlamydomonas reinhardtii uncharacterized protein (CHLRE_16g660150v5), mRNA", "blastn", "4046", "202", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Chlamydomonadales", "Chlamydomonadaceae", "Chlamydomonas", "Chlamydomonas reinhardtii"], [13700187, "PRJNA975724_S_NODE_55711_length_286_cov_2.112676_g55530_i0", "PRJNA975724", "55711", "286", "2.112676", "6.04225336", "Chlamydomonas reinhardtii", "3055", "Plants", "Plants", "119", "2.57e-22", "", "NTclustered", "gi|2082258180|ref|XM_043067316.1|", "3055", "g55530", "i0", "84.746", "48.5944055944056", "118", "18", "41", "0", "146", "263", "333", "216", "Chlamydomonas reinhardtii uncharacterized protein (CHLRE_11g467567v5), mRNA", "blastn", "13898", "119", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Chlamydomonadales", "Chlamydomonadaceae", "Chlamydomonas", "Chlamydomonas reinhardtii"], [16569245, "PRJNA975724_S_NODE_10653_length_444_cov_47.870620_g10472_i0", "PRJNA975724", "10653", "444", "47.87062", "212.5455528", "Eukaryota", "2759", "Plants", "Plants", "265", "5.07e-66", "", "NTclustered", "gi|2082260551|ref|XM_001702928.2|", "3055", "g10472", "i0", "81.538", "66.9504504504504", "325", "57", "73", "3", "118", "441", "460", "138", "Chlamydomonas reinhardtii ribosomal protein S11 (CHLRE_12g514500v5), mRNA", "blastn", "29726", "265", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Chlamydomonadales", "Chlamydomonadaceae", "Chlamydomonas", "Chlamydomonas reinhardtii"], [17524126, "PRJNA975724_S_NODE_40294_length_319_cov_1.402439_g40113_i0", "PRJNA975724", "40294", "319", "1.402439", "4.47378041", "Ostreococcus sp. 'lucimarinus'", "242159", "Plants", "Plants", "126", "1.74e-24", "", "NTclustered", "gi|145353077|ref|XM_001420819.1|", "436017", "g40113", "i0", "85.714", "4.10344827586207", "119", "17", "37", "0", "200", "318", "464", "346", "Ostreococcus lucimarinus CCE9901 predicted protein partial mRNA", "blastn", "1309", "126", "1", "Eukaryota", null, "Viridiplantae", "Chlorophyta", "Mamiellophyceae", "Mamiellales", "Bathycoccaceae", "Ostreococcus", "Ostreococcus sp. 'lucimarinus'"], [18797335, "PRJNA975724_S_NODE_16455_length_404_cov_4.728097_g16274_i0", "PRJNA975724", "16455", "404", "4.728097", "19.10151188", "Micromonas pusilla", "38833", "Plants", "Plants", "54.7", "0.011", "", "NTclustered", "gi|303286662|ref|XM_003062575.1|", "564608", "g16274", "i0", "100", "0.626237623762376", "29", "0", "7", "0", "339", "367", "399", "427", "Micromonas pusilla CCMP1545 uncharacterized protein (MICPUCDRAFT_52190), partial mRNA", "blastn", "253", "54.7", "1", "Eukaryota", null, "Viridiplantae", "Chlorophyta", "Mamiellophyceae", "Mamiellales", "Mamiellaceae", "Micromonas", "Micromonas pusilla"], [18798039, "PRJNA975724_S_NODE_43455_length_311_cov_6.571429_g43274_i0", "PRJNA975724", "43455", "311", "6.571429", "20.43714419", "Micromonas commoda", "296587", "Plants", "Plants", "183", "9.879999999999998e-42", "", "NTclustered", "gi|255072468|ref|XM_002499863.1|", "296587", "g43274", "i0", "88.312", "39.096463022508", "154", "17", "49", "1", "43", "195", "31", "184", "Micromonas commoda predicted protein mRNA", "blastn", "12159", "183", "1", "Eukaryota", null, "Viridiplantae", "Chlorophyta", "Mamiellophyceae", "Mamiellales", "Mamiellaceae", "Micromonas", "Micromonas commoda"], [20072111, "PRJNA975724_S_NODE_14716_length_414_cov_29.346041_g14535_i0", "PRJNA975724", "14716", "414", "29.346041", "121.49260974", "Volvox carteri", "3067", "Plants", "Plants", "230", "1.7099999999999998e-55", "", "NTclustered", "gi|302832853|ref|XM_002947945.1|", "3068", "g14535", "i0", "80", "12.7294685990338", "320", "57", "77", "7", "62", "378", "466", "151", "Volvox carteri f. nagariensis uncharacterized protein (VOLCADRAFT_79846), mRNA", "blastn", "5270", "230", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Chlamydomonadales", "Volvocaceae", "Volvox", "Volvox carteri"], [20393102, "PRJNA975724_S_NODE_40536_length_318_cov_2.457143_g40355_i0", "PRJNA975724", "40536", "318", "2.457143", "7.81371474", "root", "1", "Root_unresolved", "Root_unresolved", "52.8", "0.03", "", "NTclustered", "gi|37778330|gb|AY186602.1|", "3055", "g40355", "i0", "100", "2.0251572327044", "28", "0", "9", "0", "94", "121", "2793", "2766", "Chlamydomonas reinhardtii long flagella (LF3) gene, complete cds", "blastn", "644", "52.8", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Chlamydomonadales", "Chlamydomonadaceae", "Chlamydomonas", "Chlamydomonas reinhardtii"], [22623999, "PRJNA975724_S_NODE_7098_length_484_cov_3.725061_g6917_i0", "PRJNA975724", "7098", "484", "3.725061", "18.02929524", "Micromonas pusilla", "38833", "Plants", "Plants", "60.2", "2.82e-4", "", "NTclustered", "gi|303278501|ref|XM_003058498.1|", "564608", "g6917", "i0", "94.737", "0.252066115702479", "38", "2", "8", "0", "14", "51", "869", "832", "Micromonas pusilla CCMP1545 HI0933-like protein (MICPUCDRAFT_70843), mRNA", "blastn", "122", "60.2", "1", "Eukaryota", null, "Viridiplantae", "Chlorophyta", "Mamiellophyceae", "Mamiellales", "Mamiellaceae", "Micromonas", "Micromonas pusilla"], [22624401, "PRJNA975724_S_NODE_85578_length_245_cov_1.790698_g85397_i0", "PRJNA975724", "85578", "245", "1.790698", "4.3872101", "Chlamydomonas reinhardtii", "3055", "Plants", "Plants", "56.5", "0.002", "", "NTclustered", "gi|2082244824|ref|XM_043061855.1|", "3055", "g85397", "i0", "100", "0.122448979591837", "30", "0", "12", "0", "74", "103", "1676", "1647", "Chlamydomonas reinhardtii uncharacterized protein (CHLRE_04g219350v5), mRNA", "blastn", "30", "56.5", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Chlamydomonadales", "Chlamydomonadaceae", "Chlamydomonas", "Chlamydomonas reinhardtii"], [23898537, "PRJNA975724_S_NODE_38459_length_323_cov_4.360000_g38278_i0", "PRJNA975724", "38459", "323", "4.36", "14.0828", "Chlamydomonas reinhardtii", "3055", "Plants", "Plants", "169", "2.89e-37", "", "NTclustered", "gi|2082248402|ref|XM_001695422.2|", "3055", "g38278", "i0", "84.659", "42.266253869969", "176", "19", "53", "5", "148", "319", "1017", "846", "Chlamydomonas reinhardtii uncharacterized protein (CHLRE_06g284900v5), mRNA", "blastn", "13652", "169", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Chlamydomonadales", "Chlamydomonadaceae", "Chlamydomonas", "Chlamydomonas reinhardtii"], [23898605, "PRJNA975724_S_NODE_40819_length_318_cov_0.942857_g40638_i0", "PRJNA975724", "40819", "318", "0.942857", "2.99828526", "Micromonas pusilla", "38833", "Plants", "Plants", "159", "1.7099999999999996e-34", "", "NTclustered", "gi|1360907821|gb|AC277405.1|", "564608", "g40638", "i0", "87.143", "22.9528301886792", "140", "18", "44", "0", "24", "163", "1534", "1395", "Micromonas pusilla CCMP1545 clone BOUY249-D16, complete sequence", "blastn", "7299", "159", "1", "Eukaryota", null, "Viridiplantae", "Chlorophyta", "Mamiellophyceae", "Mamiellales", "Mamiellaceae", "Micromonas", "Micromonas pusilla"], [23899670, "PRJNA975724_S_NODE_80459_length_249_cov_1.750000_g80278_i0", "PRJNA975724", "80459", "249", "1.75", "4.3575", "Auxenochlorella protothecoides", "3075", "Plants", "Plants", "158", "4.639999999999999e-34", "", "NTclustered", "gi|760443472|ref|XM_011400503.1|", "3075", "g80278", "i0", "80.275", "10.3654618473896", "218", "35", "85", "6", "39", "249", "4276", "4060", "Auxenochlorella protothecoides Pyrophosphate-energized vacuolar membrane proton pump 1 partial mRNA", "blastn", "2581", "158", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Trebouxiophyceae", "Chlorellales", "Chlorellaceae", "Auxenochlorella", "Auxenochlorella protothecoides"], [25172480, "PRJNA975724_S_NODE_50860_length_295_cov_4.945946_g50679_i0", "PRJNA975724", "50860", "295", "4.945946", "14.5905407", "Chlamydomonas reinhardtii", "3055", "Plants", "Plants", "65.8", "3.52e-6", "", "NTclustered", "gi|2082257701|ref|XM_043067119.1|", "3055", "g50679", "i0", "93.182", "2.75254237288136", "44", "3", "15", "0", "252", "295", "1179", "1136", "Chlamydomonas reinhardtii uncharacterized protein (CHLRE_10g459050v5), mRNA", "blastn", "812", "65.8", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Chlamydomonadales", "Chlamydomonadaceae", "Chlamydomonas", "Chlamydomonas reinhardtii"], [25493267, "PRJNA975724_S_NODE_17500_length_398_cov_26.181538_g17319_i0", "PRJNA975724", "17500", "398", "26.181538", "104.20252124", "Eukaryota", "2759", "Plants", "Plants", "730", "0", "", "NTclustered", "gi|1714003650|gb|MN243923.1|", "3079", "g17319", "i0", "99.749", "99.6909547738694", "398", "1", "100", "0", "1", "398", "485", "882", "Chlorella sp. isolate CAVR01 small subunit ribosomal RNA gene, partial sequence", "blastn", "39677", "730", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Trebouxiophyceae", "Chlorellales", "Chlorellaceae", "Chlorella", "Chlorella sp."]], "truncated": false, "filtered_table_rows_count": 24, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "blastn", "p1": "PRJNA975724", "p2": "Chlorophyta"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA975724&tax_phylum=Chlorophyta", "results": [{"value": "PRJNA975724", "label": "PRJNA975724", "count": 24, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&tax_phylum=Chlorophyta", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA975724&tax_phylum=Chlorophyta", "results": [{"value": "blastn", "label": "blastn", "count": 24, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA975724&tax_phylum=Chlorophyta", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA975724&tax_phylum=Chlorophyta", "results": [{"value": "Eukaryota", "label": "Eukaryota", "count": 24, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA975724&tax_phylum=Chlorophyta&tax_superkingdom=Eukaryota", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA975724&tax_phylum=Chlorophyta", "results": [{"value": "core chlorophytes", "label": "core chlorophytes", "count": 18, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA975724&tax_phylum=Chlorophyta&tax_clade=core+chlorophytes", "selected": false}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA975724&tax_phylum=Chlorophyta", "results": [{"value": "Viridiplantae", "label": "Viridiplantae", "count": 24, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA975724&tax_phylum=Chlorophyta&tax_kingdom=Viridiplantae", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA975724&tax_phylum=Chlorophyta", "results": [{"value": "Chlorophyta", "label": "Chlorophyta", "count": 24, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA975724", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 106.77202599617885}