{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"blastn\", bioproject = \"PRJNA951810\" and tax_phylum = \"Gemmatimonadota\"", "rows": [[2212944, "PRJNA951810_P_NODE_60542_length_310_cov_3.485232_g60199_i0", "PRJNA951810", "60542", "310", "3.485232", "10.8042192", "uncultured Gemmatimonadaceae bacterium", "246130", "Bacteria", "Bacteria", "135", "2.8e-27", "", "NTclustered", "gi|2874253995|emb|OY970320.1|", "246130", "g60199", "i0", "83.221", "0.480645161290323", "149", "23", "48", "2", "1", "148", "1797874", "1797727", "MAG: uncultured Gemmatimonadaceae bacterium isolate MFD00031.bin.c.2 genome assembly, chromosome: 1", "blastn", "149", "135", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", "Gemmatimonadaceae", null, "uncultured Gemmatimonadaceae bacterium"], [4765192, "PRJNA951810_P_NODE_192104_length_211_cov_5.934783_g191759_i0", "PRJNA951810", "192104", "211", "5.934783", "12.52239213", "Gemmatimonas phototrophica", "1379270", "Bacteria", "Bacteria", "285", "1.68e-72", "", "NTclustered", "gi|1015602748|gb|CP011454.1|", "1379270", "g191759", "i0", "91.08", "653.388625592417", "213", "16", "100", "3", "1", "211", "2076560", "2076349", "Gemmatimonas phototrophica strain AP64, complete genome", "blastn", "137865", "285", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", "Gemmatimonadaceae", "Gemmatimonas", "Gemmatimonas phototrophica"], [7313945, "PRJNA951810_P_NODE_135266_length_269_cov_3.668367_g134921_i0", "PRJNA951810", "135266", "269", "3.668367", "9.86790723", "Gemmatirosa kalamazoonensis", "861299", "Bacteria", "Bacteria", "224", "4.929999999999999e-54", "", "NTclustered", "gi|575456455|gb|CP007128.1|", "861299", "g134921", "i0", "86.256", "28.1412639405204", "211", "23", "77", "5", "62", "269", "1897651", "1897444", "Gemmatirosa kalamazoonesis strain KBS708, complete genome", "blastn", "7570", "224", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", "Gemmatimonadaceae", "Gemmatirosa", "Gemmatirosa kalamazoonensis"], [7314493, "PRJNA951810_P_NODE_169166_length_243_cov_2.052941_g168821_i0", "PRJNA951810", "169166", "243", "2.052941", "4.98864663", "Gemmatirosa kalamazoonensis", "861299", "Bacteria", "Bacteria", "115", "2.7500000000000003e-21", "", "NTclustered", "gi|575462059|gb|CP007130.1|", "861299", "g168821", "i0", "84.746", "2.52263374485597", "118", "14", "48", "4", "25", "140", "66503", "66618", "Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence", "blastn", "613", "115", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", "Gemmatimonadaceae", "Gemmatirosa", "Gemmatirosa kalamazoonensis"], [7315446, "PRJNA951810_P_NODE_43966_length_310_cov_7.907173_g43623_i0", "PRJNA951810", "43966", "310", "7.907173", "24.5122363", "uncultured Gemmatimonadales bacterium", "412054", "Bacteria", "Bacteria", "135", "2.8e-27", "", "NTclustered", "gi|2874253978|emb|OY970303.1|", "412054", "g43623", "i0", "87.288", "18.3258064516129", "118", "15", "38", "0", "31", "148", "4200876", "4200759", "MAG: uncultured Gemmatimonadales bacterium isolate MFD01275.bin.c.12 genome assembly, chromosome: 1", "blastn", "5681", "135", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", null, null, "uncultured Gemmatimonadales bacterium"], [8589369, "PRJNA951810_P_NODE_162787_length_248_cov_0.880000_g162442_i0", "PRJNA951810", "162787", "248", "0.88", "2.1824", "uncultured Gemmatimonadales bacterium", "412054", "Bacteria", "Bacteria", "122", "1.69e-23", "", "NTclustered", "gi|2874253978|emb|OY970303.1|", "412054", "g162442", "i0", "84.553", "0.495967741935484", "123", "19", "50", "0", "33", "155", "4156115", "4156237", "MAG: uncultured Gemmatimonadales bacterium isolate MFD01275.bin.c.12 genome assembly, chromosome: 1", "blastn", "123", "122", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", null, null, "uncultured Gemmatimonadales bacterium"], [9863711, "PRJNA951810_P_NODE_123248_length_278_cov_1.385366_g122903_i0", "PRJNA951810", "123248", "278", "1.385366", "3.85131748", "Gemmatirosa kalamazoonensis", "861299", "Bacteria", "Bacteria", "385", "2.22e-102", "", "NTclustered", "gi|575456455|gb|CP007128.1|", "861299", "g122903", "i0", "91.786", "81.6690647482014", "280", "17", "100", "6", "1", "278", "3042928", "3042653", "Gemmatirosa kalamazoonesis strain KBS708, complete genome", "blastn", "22704", "385", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", "Gemmatimonadaceae", "Gemmatirosa", "Gemmatirosa kalamazoonensis"], [9864396, "PRJNA951810_P_NODE_163688_length_247_cov_3.241379_g163343_i0", "PRJNA951810", "163688", "247", "3.241379", "8.00620613", "Gemmatirosa kalamazoonensis", "861299", "Bacteria", "Bacteria", "383", "6.97e-102", "", "NTclustered", "gi|575456455|gb|CP007128.1|", "861299", "g163343", "i0", "96.154", "433.777327935223", "234", "9", "95", "0", "3", "236", "3043199", "3042966", "Gemmatirosa kalamazoonesis strain KBS708, complete genome", "blastn", "107143", "383", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", "Gemmatimonadaceae", "Gemmatirosa", "Gemmatirosa kalamazoonensis"], [12415218, "PRJNA951810_P_NODE_149130_length_258_cov_9.075676_g148785_i0", "PRJNA951810", "149130", "258", "9.075676", "23.41524408", "uncultured Gemmatimonadaceae bacterium", "246130", "Bacteria", "Bacteria", "195", "3.69e-45", "", "NTclustered", "gi|2874253995|emb|OY970320.1|", "246130", "g148785", "i0", "84.236", "12.7325581395349", "203", "28", "78", "4", "58", "258", "323193", "322993", "MAG: uncultured Gemmatimonadaceae bacterium isolate MFD00031.bin.c.2 genome assembly, chromosome: 1", "blastn", "3285", "195", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", "Gemmatimonadaceae", null, "uncultured Gemmatimonadaceae bacterium"], [18787670, "PRJNA951810_P_NODE_133475_length_270_cov_6.385787_g133130_i0", "PRJNA951810", "133475", "270", "6.385787", "17.2416249", "Gemmatimonadota bacterium", "2026742", "Bacteria", "Bacteria", "110", "1.45e-19", "", "NTclustered", "gi|2107901501|gb|CP070815.1|", "2026742", "g133130", "i0", "90.588", "29.6962962962963", "85", "4", "30", "4", "8", "88", "1390522", "1390438", "MAG: Gemmatimonadetes bacterium isolate bin118 chromosome", "blastn", "8018", "110", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", null, null, null, null, "Gemmatimonadota bacterium"], [18789101, "PRJNA951810_P_NODE_36435_length_326_cov_2.403162_g36092_i0", "PRJNA951810", "36435", "326", "2.403162", "7.83430812", "Gemmatirosa kalamazoonensis", "861299", "Bacteria", "Bacteria", "494", "4.24e-135", "", "NTclustered", "gi|575456455|gb|CP007128.1|", "861299", "g36092", "i0", "94.136", "49.739263803681", "324", "19", "99", "0", "1", "324", "3043220", "3043543", "Gemmatirosa kalamazoonesis strain KBS708, complete genome", "blastn", "16215", "494", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", "Gemmatimonadaceae", "Gemmatirosa", "Gemmatirosa kalamazoonensis"], [21338409, "PRJNA951810_P_NODE_159237_length_250_cov_6.446328_g158892_i0", "PRJNA951810", "159237", "250", "6.446328", "16.11582", "Pseudogemmatithrix spongiicola", "3062599", "Bacteria", "Bacteria", "141", "4.7e-29", "", "NTclustered", "gi|2557479348|gb|CP130613.1|", "3062599", "g158892", "i0", "79.71", "2.148", "207", "32", "81", "9", "12", "213", "428756", "428957", "Pseudogemmatithrix spongiicola strain 318 chromosome, complete genome", "blastn", "537", "141", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", "Gemmatimonadaceae", "Pseudogemmatithrix", "Pseudogemmatithrix spongiicola"], [25164015, "PRJNA951810_P_NODE_70840_length_304_cov_1.285714_g70496_i0", "PRJNA951810", "70840", "304", "1.285714", "3.90857056", "uncultured Gemmatimonadales bacterium", "412054", "Bacteria", "Bacteria", "440", "5.169999999999997e-119", "", "NTclustered", "gi|2874253789|emb|OY969773.1|", "412054", "g70496", "i0", "92.787", "156.546052631579", "305", "21", "100", "1", "1", "304", "423120", "422816", "MAG: uncultured Gemmatimonadales bacterium isolate MFD04580.bin.2.49 genome assembly, chromosome: 1", "blastn", "47590", "440", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", null, null, "uncultured Gemmatimonadales bacterium"]], "truncated": false, "filtered_table_rows_count": 13, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "blastn", "p1": "PRJNA951810", "p2": "Gemmatimonadota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA951810&tax_phylum=Gemmatimonadota", "results": [{"value": "PRJNA951810", "label": "PRJNA951810", "count": 13, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&tax_phylum=Gemmatimonadota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA951810&tax_phylum=Gemmatimonadota", "results": [{"value": "blastn", "label": "blastn", "count": 13, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA951810&tax_phylum=Gemmatimonadota", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA951810&tax_phylum=Gemmatimonadota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 13, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA951810&tax_phylum=Gemmatimonadota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA951810&tax_phylum=Gemmatimonadota", "results": [{"value": "FCB group", "label": "FCB group", "count": 13, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA951810&tax_phylum=Gemmatimonadota&tax_clade=FCB+group", "selected": false}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA951810&tax_phylum=Gemmatimonadota", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 13, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA951810&tax_phylum=Gemmatimonadota&tax_kingdom=Pseudomonadati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA951810&tax_phylum=Gemmatimonadota", "results": [{"value": "Gemmatimonadota", "label": "Gemmatimonadota", "count": 13, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA951810", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 188.17381700000624}