{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"blastn\", bioproject = \"PRJNA928559\" and tax_phylum = \"Spirochaetota\"", "rows": [[3805048, "PRJNA928559_P_NODE_22743_length_670_cov_4.775544_g21253_i0", "PRJNA928559", "22743", "670", "4.775544", "31.9961448", "Turneriella", "338321", "Bacteria", "Bacteria", "1029", "0", "", "NTclustered", "gi|470489162|ref|NR_076910.1|", "29510", "g21253", "i0", "94.486", "232.083582089552", "671", "32", "99", "5", "1", "668", "775", "107", "Turneriella parva strain DSM 21527 23S ribosomal RNA gene, complete sequence", "blastn", "155496", "1029", "1", "Bacteria", null, "Pseudomonadati", "Spirochaetota", "Spirochaetia", "Leptospirales", "Leptospiraceae", "Turneriella", "Turneriella parva"], [6006112, "PRJNA928559_P_NODE_16925_length_763_cov_2.694203_g15513_i0", "PRJNA928559", "16925", "763", "2.694203", "20.55676889", "Spirochaetota bacterium", "2202144", "Bacteria", "Bacteria", "148", "9.49e-31", "", "NTclustered", "gi|2649718696|emb|OZ001226.1|", "2202144", "g15513", "i0", "80.193", "18.8335517693316", "207", "34", "27", "5", "158", "360", "74345", "74548", "MAG: Spirochaetota bacterium isolate 8b34eeeb-0c33-43c6-8155-d1d64b2f6b4c genome assembly, chromosome: 19", "blastn", "14370", "148", "1", "Bacteria", null, "Pseudomonadati", "Spirochaetota", null, null, null, null, "Spirochaetota bacterium"], [6356877, "PRJNA928559_P_NODE_175885_length_262_cov_5.021164_g174316_i0", "PRJNA928559", "175885", "262", "5.021164", "13.15544968", "Turneriella", "338321", "Bacteria", "Bacteria", "411", "3.419999999999999e-110", "", "NTclustered", "gi|470489162|ref|NR_076910.1|", "29510", "g174316", "i0", "95.057", "149.599236641221", "263", "9", "99", "2", "2", "260", "1214", "1476", "Turneriella parva strain DSM 21527 23S ribosomal RNA gene, complete sequence", "blastn", "39195", "411", "1", "Bacteria", null, "Pseudomonadati", "Spirochaetota", "Spirochaetia", "Leptospirales", "Leptospiraceae", "Turneriella", "Turneriella parva"], [7631096, "PRJNA928559_P_NODE_217426_length_238_cov_3.903030_g215857_i0", "PRJNA928559", "217426", "238", "3.9030300000000002", "9.2892114", "Treponema", "157", "Bacteria", "Bacteria", "435", "1.8200000000000003e-117", "", "NTclustered", "gi|1826584176|gb|MT257120.1|", "162155", "g215857", "i0", "99.58", "149.794117647059", "238", "1", "100", "0", "1", "238", "596", "359", "Uncultured Treponema sp. clone BOC15 23S ribosomal RNA gene, partial sequence", "blastn", "35651", "435", "1", "Bacteria", null, "Pseudomonadati", "Spirochaetota", "Spirochaetia", "Spirochaetales", "Treponemataceae", "Treponema", "uncultured Treponema sp."], [11456575, "PRJNA928559_P_NODE_170129_length_268_cov_1.333333_g168560_i0", "PRJNA928559", "170129", "268", "1.333333", "3.57333244", "Entomospira", "2834378", "Bacteria", "Bacteria", "158", "5.05e-34", "", "NTclustered", "gi|2446641004|gb|CP118168.1|", "2719987", "g168560", "i0", "77.941", "212.847014925373", "272", "46", "99", "13", "1", "264", "323022", "323287", "Entomospira nematocerorum strain BR208 chromosome", "blastn", "57043", "158", "1", "Bacteria", null, "Pseudomonadati", "Spirochaetota", "Spirochaetia", "Spirochaetales", "Spirochaetaceae", "Entomospira", "Entomospira nematocerorum"], [12732280, "PRJNA928559_P_NODE_180250_length_259_cov_1.268817_g178681_i0", "PRJNA928559", "180250", "259", "1.268817", "3.28623603", "Leptospira", "171", "Bacteria", "Bacteria", "169", "2.24e-37", "", "NTclustered", "gi|2777203535|gb|CP162142.1|", "3235171", "g178681", "i0", "80.085", "22.046332046332", "236", "40", "90", "6", "21", "253", "2717395", "2717164", "Leptospira iowaensis strain WS39.C2 chromosome 1, complete sequence", "blastn", "5710", "169", "1", "Bacteria", null, "Pseudomonadati", "Spirochaetota", "Spirochaetia", "Leptospirales", "Leptospiraceae", "Leptospira", "Leptospira iowaensis"], [14931944, "PRJNA928559_P_NODE_4072_length_1462_cov_27.092873_g3362_i0", "PRJNA928559", "4072", "1462", "27.092873", "396.09780326", "Spirochaetota bacterium", "2202144", "Bacteria", "Bacteria", "143", "8.65e-29", "", "NTclustered", "gi|2649718696|emb|OZ001226.1|", "2202144", "g3362", "i0", "81.461", "10.5266757865937", "178", "30", "12", "3", "653", "828", "74549", "74373", "MAG: Spirochaetota bacterium isolate 8b34eeeb-0c33-43c6-8155-d1d64b2f6b4c genome assembly, chromosome: 19", "blastn", "15390", "143", "1", "Bacteria", null, "Pseudomonadati", "Spirochaetota", null, null, null, null, "Spirochaetota bacterium"], [16205256, "PRJNA928559_P_NODE_128273_length_313_cov_20.783333_g126704_i0", "PRJNA928559", "128273", "313", "20.783333", "65.05183229", "Borrelia turcica", "229155", "Bacteria", "Bacteria", "102", "2.87e-17", "", "NTclustered", "gi|1484376061|gb|CP028884.1|", "1104446", "g126704", "i0", "86", "0.603833865814696", "100", "8", "31", "6", "126", "222", "776056", "776152", "Borrelia turcica IST7 chromosome, complete genome", "blastn", "189", "102", "1", "Bacteria", null, "Pseudomonadati", "Spirochaetota", "Spirochaetia", "Spirochaetales", "Borreliaceae", "Borrelia", "Borrelia turcica"], [16555625, "PRJNA928559_P_NODE_49973_length_484_cov_4.739659_g48411_i0", "PRJNA928559", "49973", "484", "4.739659", "22.93994956", "Turneriella", "338321", "Bacteria", "Bacteria", "833", "0", "", "NTclustered", "gi|470489162|ref|NR_076910.1|", "29510", "g48411", "i0", "98.316", "246.45867768595", "475", "8", "98", "0", "10", "484", "1211", "737", "Turneriella parva strain DSM 21527 23S ribosomal RNA gene, complete sequence", "blastn", "119286", "833", "1", "Bacteria", null, "Pseudomonadati", "Spirochaetota", "Spirochaetia", "Leptospirales", "Leptospiraceae", "Turneriella", "Turneriella parva"], [24204315, "PRJNA928559_P_NODE_158239_length_279_cov_2.033981_g156670_i0", "PRJNA928559", "158239", "279", "2.033981", "5.67480699", "Pseudomonadati", "3379134", "Bacteria", "Bacteria", "115", "3.23e-21", "", "NTclustered", "gi|2581921758|dbj|AP025291.1|", "165", "g156670", "i0", "97.059", "119.530465949821", "68", "2", "24", "0", "211", "278", "6763", "6830", "Treponema saccharophilum JCM 32279 plasmid pTSrrn DNA, complete genome", "blastn", "33349", "115", "1", "Bacteria", null, "Pseudomonadati", "Spirochaetota", "Spirochaetia", "Spirochaetales", "Treponemataceae", "Treponema", "Treponema saccharophilum"], [25130119, "PRJNA928559_P_NODE_39640_length_531_cov_13.122271_g38084_i0", "PRJNA928559", "39640", "531", "13.122271", "69.67925901", "Spirochaetota bacterium", "2202144", "Bacteria", "Bacteria", "165", "6.42e-36", "", "NTclustered", "gi|2649718696|emb|OZ001226.1|", "2202144", "g38084", "i0", "83.616", "44.7947269303202", "177", "28", "33", "1", "356", "531", "74373", "74549", "MAG: Spirochaetota bacterium isolate 8b34eeeb-0c33-43c6-8155-d1d64b2f6b4c genome assembly, chromosome: 19", "blastn", "23786", "165", "1", "Bacteria", null, "Pseudomonadati", "Spirochaetota", null, null, null, null, "Spirochaetota bacterium"]], "truncated": false, "filtered_table_rows_count": 11, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "blastn", "p1": "PRJNA928559", "p2": "Spirochaetota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA928559&tax_phylum=Spirochaetota", "results": [{"value": "PRJNA928559", "label": "PRJNA928559", "count": 11, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&tax_phylum=Spirochaetota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA928559&tax_phylum=Spirochaetota", "results": [{"value": "blastn", "label": "blastn", "count": 11, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA928559&tax_phylum=Spirochaetota", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA928559&tax_phylum=Spirochaetota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 11, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA928559&tax_phylum=Spirochaetota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA928559&tax_phylum=Spirochaetota", "results": [], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA928559&tax_phylum=Spirochaetota", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 11, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA928559&tax_phylum=Spirochaetota&tax_kingdom=Pseudomonadati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA928559&tax_phylum=Spirochaetota", "results": [{"value": "Spirochaetota", "label": "Spirochaetota", "count": 11, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA928559", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 246.248288982315}