{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"blastn\", bioproject = \"PRJNA911178\" and tax_kingdom = \"Fusobacteriati\"", "rows": [[4720769, "PRJNA911178_P_NODE_216564_length_263_cov_1.157895_g214090_i0", "PRJNA911178", "216564", "263", "1.157895", "3.04526385", "Leptotrichia sp. oral taxon 212", "712357", "Bacteria", "Bacteria", "481", "2.58e-131", "", "NTclustered", "gi|922689899|gb|CP012410.1|", "712357", "g214090", "i0", "99.62", "461.927756653992", "263", "1", "100", "0", "1", "263", "52716", "52454", "Leptotrichia sp. oral taxon 212 strain W10393, complete genome", "blastn", "121487", "481", "1", "Bacteria", null, "Fusobacteriati", "Fusobacteriota", "Fusobacteriia", "Fusobacteriales", "Leptotrichiaceae", "Leptotrichia", "Leptotrichia sp. oral taxon 212"], [5995363, "PRJNA911178_P_NODE_200385_length_271_cov_2.717172_g197911_i0", "PRJNA911178", "200385", "271", "2.717172", "7.36353612", "Leptotrichia wadei", "157687", "Bacteria", "Bacteria", "486", "5.7499999999999985e-133", "", "NTclustered", "gi|1708575239|dbj|AP019834.1|", "157687", "g197911", "i0", "99.624", "231.250922509225", "266", "1", "98", "0", "6", "271", "221341", "221606", "Leptotrichia wadei JMUB3933 DNA, complete genome", "blastn", "62669", "486", "1", "Bacteria", null, "Fusobacteriati", "Fusobacteriota", "Fusobacteriia", "Fusobacteriales", "Leptotrichiaceae", "Leptotrichia", "Leptotrichia wadei"], [5996404, "PRJNA911178_P_NODE_45985_length_509_cov_2.350917_g43560_i0", "PRJNA911178", "45985", "509", "2.350917", "11.96616753", "Leptotrichia hofstadii", "157688", "Bacteria", "Bacteria", "924", "0", "", "NTclustered", "gi|1708566027|dbj|AP019823.1|", "157688", "g43560", "i0", "99.411", "367.157170923379", "509", "3", "100", "0", "1", "509", "577118", "577626", "Leptotrichia hofstadii JCM16775 DNA, complete genome", "blastn", "186883", "924", "1", "Bacteria", null, "Fusobacteriati", "Fusobacteriota", "Fusobacteriia", "Fusobacteriales", "Leptotrichiaceae", "Leptotrichia", "Leptotrichia hofstadii"], [8545173, "PRJNA911178_P_NODE_218247_length_262_cov_1.253968_g215773_i0", "PRJNA911178", "218247", "262", "1.253968", "3.28539616", "Leptotrichia buccalis", "40542", "Bacteria", "Bacteria", "462", "9.319999999999999e-126", "", "NTclustered", "gi|257048753|gb|CP001685.1|", "523794", "g215773", "i0", "98.842", "228.358778625954", "259", "3", "99", "0", "4", "262", "119062", "119320", "Leptotrichia buccalis DSM 1135, complete genome", "blastn", "59830", "462", "1", "Bacteria", null, "Fusobacteriati", "Fusobacteriota", "Fusobacteriia", "Fusobacteriales", "Leptotrichiaceae", "Leptotrichia", "Leptotrichia buccalis"], [9819637, "PRJNA911178_P_NODE_156248_length_299_cov_2.185841_g153775_i0", "PRJNA911178", "156248", "299", "2.185841", "6.53566459", "Leptotrichia shahii", "157691", "Bacteria", "Bacteria", "514", "2.95e-141", "", "NTclustered", "gi|1708568515|dbj|AP019827.1|", "157691", "g153775", "i0", "97.659", "446.565217391304", "299", "7", "100", "0", "1", "299", "96078", "96376", "Leptotrichia shahii JCM16776 DNA, complete genome", "blastn", "133523", "514", "1", "Bacteria", null, "Fusobacteriati", "Fusobacteriota", "Fusobacteriia", "Fusobacteriales", "Leptotrichiaceae", "Leptotrichia", "Leptotrichia shahii"], [11094993, "PRJNA911178_P_NODE_121969_length_332_cov_4.285714_g119497_i0", "PRJNA911178", "121969", "332", "4.285714", "14.22857048", "Leptotrichia wadei", "157687", "Bacteria", "Bacteria", "599", "8.909999999999998e-167", "", "NTclustered", "gi|1708575239|dbj|AP019834.1|", "157687", "g119497", "i0", "99.694", "464.503012048193", "327", "1", "98", "0", "6", "332", "1694883", "1694557", "Leptotrichia wadei JMUB3933 DNA, complete genome", "blastn", "154215", "599", "1", "Bacteria", null, "Fusobacteriati", "Fusobacteriota", "Fusobacteriia", "Fusobacteriales", "Leptotrichiaceae", "Leptotrichia", "Leptotrichia wadei"], [11095632, "PRJNA911178_P_NODE_198849_length_272_cov_1.969849_g196376_i0", "PRJNA911178", "198849", "272", "1.969849", "5.35798928", "Fusobacterium polymorphum", "76857", "Bacteria", "Bacteria", "473", "4.4899999999999996e-129", "", "NTclustered", "gi|2706435836|gb|CP077154.1|", "76857", "g196376", "i0", "98.507", "108.628676470588", "268", "4", "99", "0", "1", "268", "1044042", "1044309", "Fusobacterium polymorphum strain KCOM1267 chromosome, complete genome", "blastn", "29547", "473", "1", "Bacteria", null, "Fusobacteriati", "Fusobacteriota", "Fusobacteriia", "Fusobacteriales", "Fusobacteriaceae", "Fusobacterium", "Fusobacterium polymorphum"], [11096923, "PRJNA911178_P_NODE_71769_length_416_cov_3.877551_g69306_i0", "PRJNA911178", "71769", "416", "3.877551", "16.13061216", "Leptotrichia sp. oral taxon 212", "712357", "Bacteria", "Bacteria", "752", "0", "", "NTclustered", "gi|922689899|gb|CP012410.1|", "712357", "g69306", "i0", "99.756", "275.899038461538", "410", "1", "99", "0", "6", "415", "52861", "53270", "Leptotrichia sp. oral taxon 212 strain W10393, complete genome", "blastn", "114774", "752", "1", "Bacteria", null, "Fusobacteriati", "Fusobacteriota", "Fusobacteriia", "Fusobacteriales", "Leptotrichiaceae", "Leptotrichia", "Leptotrichia sp. oral taxon 212"], [11454622, "PRJNA911178_P_NODE_98049_length_364_cov_1.975945_g95579_i0", "PRJNA911178", "98049", "364", "1.975945", "7.1924398", "Fusobacterium", "848", "Bacteria", "Bacteria", "660", "0", "", "NTclustered", "gi|2445153921|gb|CP117797.1|", "851", "g95579", "i0", "99.722", "342.917582417582", "360", "1", "99", "0", "5", "364", "111707", "112066", "Fusobacterium nucleatum strain FNA chromosome, complete genome", "blastn", "124822", "660", "1", "Bacteria", null, "Fusobacteriati", "Fusobacteriota", "Fusobacteriia", "Fusobacteriales", "Fusobacteriaceae", "Fusobacterium", "Fusobacterium nucleatum"], [13646222, "PRJNA911178_P_NODE_256131_length_248_cov_0.880000_g253657_i0", "PRJNA911178", "256131", "248", "0.88", "2.1824", "Fusobacterium pseudoperiodonticum", "2663009", "Bacteria", "Bacteria", "370", "5.45e-98", "", "NTclustered", "gi|1276714546|gb|CP024702.1|", "2663009", "g253657", "i0", "93.878", "44.9112903225806", "245", "15", "99", "0", "4", "248", "1690079", "1690323", "Fusobacterium pseudoperiodonticum strain KCOM 1282 chromosome, complete genome", "blastn", "11138", "370", "1", "Bacteria", null, "Fusobacteriati", "Fusobacteriota", "Fusobacteriia", "Fusobacteriales", "Fusobacteriaceae", "Fusobacterium", "Fusobacterium pseudoperiodonticum"], [16551933, "PRJNA911178_P_NODE_105233_length_353_cov_7.871429_g102761_i0", "PRJNA911178", "105233", "353", "7.871429", "27.78614437", "Fusobacterium", "848", "Bacteria", "Bacteria", "645", "1.2e-180", "", "NTclustered", "gi|1370537877|gb|CP028108.1|", "860", "g102761", "i0", "100", "346.263456090652", "349", "0", "99", "0", "5", "353", "459851", "460199", "Fusobacterium periodonticum strain 2_1_31 chromosome, complete genome", "blastn", "122231", "645", "1", "Bacteria", null, "Fusobacteriati", "Fusobacteriota", "Fusobacteriia", "Fusobacteriales", "Fusobacteriaceae", "Fusobacterium", "Fusobacterium periodonticum"], [18743405, "PRJNA911178_P_NODE_170035_length_289_cov_1.231481_g167562_i0", "PRJNA911178", "170035", "289", "1.231481", "3.55898009", "Fusobacterium polymorphum", "76857", "Bacteria", "Bacteria", "54.7", "0.007", "", "NTclustered", "gi|2645859777|gb|CP141277.1|", "76857", "g167562", "i0", "96.875", "0.110726643598616", "32", "1", "11", "0", "234", "265", "2134533", "2134564", "Fusobacterium polymorphum strain C48P chromosome, complete genome", "blastn", "32", "54.7", "1", "Bacteria", null, "Fusobacteriati", "Fusobacteriota", "Fusobacteriia", "Fusobacteriales", "Fusobacteriaceae", "Fusobacterium", "Fusobacterium polymorphum"], [20018329, "PRJNA911178_P_NODE_159036_length_297_cov_1.357143_g156563_i0", "PRJNA911178", "159036", "297", "1.357143", "4.03071471", "Leptotrichia wadei", "157687", "Bacteria", "Bacteria", "529", "1.0499999999999996e-145", "", "NTclustered", "gi|1708582457|dbj|AP019841.1|", "157687", "g156563", "i0", "98.983", "417.474747474747", "295", "3", "99", "0", "1", "295", "221367", "221073", "Leptotrichia wadei JMUB3936 DNA, complete genome", "blastn", "123990", "529", "1", "Bacteria", null, "Fusobacteriati", "Fusobacteriota", "Fusobacteriia", "Fusobacteriales", "Leptotrichiaceae", "Leptotrichia", "Leptotrichia wadei"], [21294212, "PRJNA911178_P_NODE_218917_length_261_cov_2.521277_g216443_i0", "PRJNA911178", "218917", "261", "2.521277", "6.58053297", "Leptotrichia wadei", "157687", "Bacteria", "Bacteria", "431", "2.62e-116", "", "NTclustered", "gi|1708575239|dbj|AP019834.1|", "157687", "g216443", "i0", "97.984", "417.026819923372", "248", "5", "95", "0", "3", "250", "222514", "222267", "Leptotrichia wadei JMUB3933 DNA, complete genome", "blastn", "108844", "431", "1", "Bacteria", null, "Fusobacteriati", "Fusobacteriota", "Fusobacteriia", "Fusobacteriales", "Leptotrichiaceae", "Leptotrichia", "Leptotrichia wadei"], [21652925, "PRJNA911178_P_NODE_85237_length_386_cov_3.517572_g82769_i0", "PRJNA911178", "85237", "386", "3.517572", "13.57782792", "Fusobacterium", "848", "Bacteria", "Bacteria", "691", "0", "", "NTclustered", "gi|15028908|emb|AJ307974.1|", "851", "g82769", "i0", "99.735", "466.033678756477", "377", "1", "98", "0", "9", "385", "153", "529", "Fusobacterium nucleatum 23S rRNA gene, strain DSM 20482", "blastn", "179889", "697", "0.991391678622669", "Bacteria", null, "Fusobacteriati", "Fusobacteriota", "Fusobacteriia", "Fusobacteriales", "Fusobacteriaceae", "Fusobacterium", "Fusobacterium nucleatum"], [24201543, "PRJNA911178_P_NODE_20879_length_736_cov_3.407240_g18676_i0", "PRJNA911178", "20879", "736", "3.40724", "25.0772864", "Leptotrichia", "32067", "Bacteria", "Bacteria", "1218", "0", "", "NTclustered", "gi|1708575239|dbj|AP019834.1|", "157687", "g18676", "i0", "96.744", "458.520380434783", "737", "13", "99", "7", "4", "735", "2244414", "2243684", "Leptotrichia wadei JMUB3933 DNA, complete genome", "blastn", "337471", "1219", "0.999179655455291", "Bacteria", null, "Fusobacteriati", "Fusobacteriota", "Fusobacteriia", "Fusobacteriales", "Leptotrichiaceae", "Leptotrichia", "Leptotrichia wadei"], [25477415, "PRJNA911178_P_NODE_9480_length_1078_cov_4.705473_g7910_i0", "PRJNA911178", "9480", "1078", "4.705473", "50.72499894", "Leptotrichia", "32067", "Bacteria", "Bacteria", "1685", "0", "", "NTclustered", "gi|470484715|ref|NR_076664.1|", "40542", "g7910", "i0", "94.907", "459.730055658627", "1080", "50", "99", "4", "1", "1077", "1099", "22", "Leptotrichia buccalis strain C-1013-b 23S ribosomal RNA gene, complete sequence", "blastn", "495589", "1701", "0.990593768371546", "Bacteria", null, "Fusobacteriati", "Fusobacteriota", "Fusobacteriia", "Fusobacteriales", "Leptotrichiaceae", "Leptotrichia", "Leptotrichia buccalis"]], "truncated": false, "filtered_table_rows_count": 17, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_kingdom\" = :p2 order by rowid limit 101", "params": {"p0": "blastn", "p1": "PRJNA911178", "p2": "Fusobacteriati"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA911178&tax_kingdom=Fusobacteriati", "results": [{"value": "PRJNA911178", "label": "PRJNA911178", "count": 17, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&tax_kingdom=Fusobacteriati", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA911178&tax_kingdom=Fusobacteriati", "results": [{"value": "blastn", "label": "blastn", "count": 17, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA911178&tax_kingdom=Fusobacteriati", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA911178&tax_kingdom=Fusobacteriati", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 17, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA911178&tax_kingdom=Fusobacteriati&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA911178&tax_kingdom=Fusobacteriati", "results": [], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA911178&tax_kingdom=Fusobacteriati", "results": [{"value": "Fusobacteriati", "label": "Fusobacteriati", "count": 17, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA911178", "selected": true}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA911178&tax_kingdom=Fusobacteriati", "results": [{"value": "Fusobacteriota", "label": "Fusobacteriota", "count": 17, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA911178&tax_kingdom=Fusobacteriati&tax_phylum=Fusobacteriota", "selected": false}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 110.7488639991061}