{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"blastn\", bioproject = \"PRJNA909412\" and tax_clade = \"core chlorophytes\"", "rows": [[890624, "PRJNA909412_P_NODE_14601_length_157_cov_1.059322_g14460_i0", "PRJNA909412", "14601", "157", "1.059322", "1.66313554", "Coelastrum microporum", "55409", "Plants", "Plants", "241", "2.5800000000000007e-59", "", "NTclustered", "gi|2386955046|ref|NC_068582.1|", "55409", "g14460", "i0", "94.268", "76.9426751592357", "157", "9", "100", "0", "1", "157", "47652", "47496", "Coelastrum microporum chloroplast, complete genome", "blastn", "12080", "241", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Sphaeropleales", "Scenedesmaceae", "Coelastrum", "Coelastrum microporum"], [5993857, "PRJNA909412_P_NODE_10465_length_172_cov_2.902256_g10324_i0", "PRJNA909412", "10465", "172", "2.902256", "4.99188032", "Pediastrum duplex", "3105", "Plants", "Plants", "252", "1.33e-62", "", "NTclustered", "gi|21040380|gb|AF183479.2|", "3105", "g10324", "i0", "93.143", "30.4418604651163", "175", "6", "100", "4", "1", "172", "3071", "3242", "Pediastrum duplex strain UTEX LB 1364 28S ribosomal RNA gene, partial sequence", "blastn", "5236", "252", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Sphaeropleales", "Hydrodictyaceae", "Pediastrum", "Pediastrum duplex"], [5993913, "PRJNA909412_P_NODE_16765_length_151_cov_2.517857_g16624_i0", "PRJNA909412", "16765", "151", "2.517857", "3.80196407", "Halochlorococcum sp. NIES-1838", "2249730", "Plants", "Plants", "268", "1.12e-67", "", "NTclustered", "gi|1409970159|gb|MG721781.1|", "2249730", "g16624", "i0", "98.675", "115.867549668874", "151", "2", "100", "0", "1", "151", "731", "881", "Halochlorococcum sp. NIES-1838 PsbA (psbA) gene, complete cds; chloroplast", "blastn", "17496", "268", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Ulvophyceae", "Chlorocystidales", "Chlorocystidaceae", "Halochlorococcum", "Halochlorococcum sp. NIES-1838"], [7268815, "PRJNA909412_P_NODE_15666_length_153_cov_2.561404_g15525_i0", "PRJNA909412", "15666", "153", "2.561404", "3.91894812", "Coelastrum microporum", "55409", "Plants", "Plants", "283", "4.0799999999999995e-72", "", "NTclustered", "gi|2386955046|ref|NC_068582.1|", "55409", "g15525", "i0", "100", "37.9346405228758", "153", "0", "100", "0", "1", "153", "92728", "92880", "Coelastrum microporum chloroplast, complete genome", "blastn", "5804", "283", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Sphaeropleales", "Scenedesmaceae", "Coelastrum", "Coelastrum microporum"], [7268881, "PRJNA909412_P_NODE_9206_length_177_cov_1.144928_g9065_i0", "PRJNA909412", "9206", "177", "1.144928", "2.02652256", "Tetraselmis cordiformis", "426497", "Plants", "Plants", "261", "2.28e-65", "", "NTclustered", "gi|371782133|emb|HE610165.1|", "426497", "g9065", "i0", "93.22", "158.271186440678", "177", "12", "100", "0", "1", "177", "3726", "3902", "Tetraselmis cordiformis plastid 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 26.82", "blastn", "28014", "261", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorodendrophyceae", "Chlorodendrales", "Chlorodendraceae", "Tetraselmis", "Tetraselmis cordiformis"], [11452943, "PRJNA909412_P_NODE_5949_length_214_cov_4.462857_g5808_i0", "PRJNA909412", "5949", "214", "4.462857", "9.55051398", "Chlorellales", "35460", "Plants", "Plants", "335", "1.6699999999999995e-87", "", "NTclustered", "gi|1134678412|gb|KU598841.1|", "248742", "g5808", "i0", "94.86", "96.5654205607477", "214", "11", "100", "0", "1", "214", "714", "501", "Coccomyxa subellipsoidea strain SAG 216-13 23S ribosomal RNA (rrl) gene, partial sequence; chloroplast", "blastn", "20665", "335", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Trebouxiophyceae", null, "Coccomyxaceae", "Coccomyxa", "Coccomyxa subellipsoidea"], [12369835, "PRJNA909412_P_NODE_8290_length_185_cov_0.842466_g8149_i0", "PRJNA909412", "8290", "185", "0.842466", "1.5585621", "Oedogonium crispum", "321588", "Plants", "Plants", "309", "8.49e-80", "", "NTclustered", "gi|2031444893|gb|MW250872.1|", "321588", "g8149", "i0", "97.765", "100.551351351351", "179", "4", "97", "0", "7", "185", "78036", "77858", "Oedogonium crispum isolate 33_chl plastid, complete genome", "blastn", "18602", "309", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Oedogoniales", "Oedogoniaceae", "Oedogonium", "Oedogonium crispum"], [14918596, "PRJNA909412_P_NODE_10352_length_172_cov_2.977444_g10211_i0", "PRJNA909412", "10352", "172", "2.977444", "5.12120368", "Trebouxia sp. A1-2", "2608996", "Plants", "Plants", "84.2", "5.12e-12", "", "NTclustered", "gi|1825511251|gb|MN642622.1|", "2608996", "g10211", "i0", "90.625", "5.01744186046512", "64", "4", "36", "1", "93", "154", "86144", "86207", "Trebouxia sp. A1-2 mitochondrion, complete genome", "blastn", "863", "84.2", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Trebouxiophyceae", "Trebouxiales", "Trebouxiaceae", "Trebouxia", "Trebouxia sp. A1-2"], [19100696, "PRJNA909412_P_NODE_16675_length_151_cov_3.017857_g16534_i0", "PRJNA909412", "16675", "151", "3.017857", "4.55696407", "Chlamydomonas", "3052", "Plants", "Plants", "268", "1.12e-67", "", "NTclustered", "gi|397100|emb|X68910.1|", "28460", "g16534", "i0", "98.675", "135.145695364238", "151", "2", "100", "0", "1", "151", "929", "779", "Chloroplast Chlamydomonas mexicana rrnL gene, exon 1", "blastn", "20407", "268", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Chlamydomonadales", "Chlamydomonadaceae", "Chlamydomonas", "Chlamydomonas mexicana"], [20375503, "PRJNA909412_P_NODE_12336_length_162_cov_1.845528_g12195_i0", "PRJNA909412", "12336", "162", "1.845528", "2.98975536", "Cladophora", "34125", "Plants", "Plants", "300", "4.36e-77", "", "NTclustered", "gi|388883486|dbj|AB665583.1|", "34126", "g12195", "i0", "100", "100", "162", "0", "100", "0", "1", "162", "581", "742", "Cladophora albida gene for 18S rRNA, partial sequence, isolate: alb-6", "blastn", "16200", "300", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Ulvophyceae", "Cladophorales", "Cladophoraceae", "Cladophora", "Cladophora albida"], [21651408, "PRJNA909412_P_NODE_4037_length_262_cov_2.210762_g3896_i0", "PRJNA909412", "4037", "262", "2.210762", "5.79219644", "Hydrodictyaceae", "3103", "Plants", "Plants", "342", "1.2699999999999996e-89", "", "NTclustered", "gi|21040380|gb|AF183479.2|", "3105", "g3896", "i0", "90.698", "68.5801526717557", "258", "23", "98", "1", "6", "262", "2999", "3256", "Pediastrum duplex strain UTEX LB 1364 28S ribosomal RNA gene, partial sequence", "blastn", "17968", "342", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Sphaeropleales", "Hydrodictyaceae", "Pediastrum", "Pediastrum duplex"], [23842877, "PRJNA909412_P_NODE_11079_length_172_cov_1.248120_g10938_i0", "PRJNA909412", "11079", "172", "1.24812", "2.1467664", "Chlamydomonas chlamydogama", "225041", "Plants", "Plants", "163", "6.390000000000001e-36", "", "NTclustered", "gi|66864258|gb|DQ015713.1|", "225041", "g10938", "i0", "83.815", "1.79651162790698", "173", "26", "100", "2", "1", "172", "3207", "3036", "Chlamydomonas chlamydogama strain UTEX 102 26S ribosomal RNA gene, partial sequence", "blastn", "309", "163", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Chlamydomonadales", "Chlamydomonadaceae", "Chlamydomonas", "Chlamydomonas chlamydogama"], [23842881, "PRJNA909412_P_NODE_11779_length_166_cov_2.692913_g11638_i0", "PRJNA909412", "11779", "166", "2.692913", "4.47023558", "Paradoxia multiseta", "249350", "Plants", "Plants", "222", "1e-53", "", "NTclustered", "gi|723457039|ref|NC_025540.1|", "249350", "g11638", "i0", "90.964", "119.861445783133", "166", "13", "99", "2", "1", "165", "2789", "2625", "Paradoxia multiseta culture-collection SAG:18.84 chloroplast, complete genome", "blastn", "19897", "222", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Trebouxiophyceae", null, "Coccomyxaceae", "Paradoxia", "Paradoxia multiseta"], [23842939, "PRJNA909412_P_NODE_299_length_1005_cov_78.720497_g246_i0", "PRJNA909412", "299", "1005", "78.720497", "791.14099485", "Stigeoclonium helveticum", "55999", "Plants", "Plants", "65.8", "1.31e-5", "", "NTclustered", "gi|162134275|gb|EU123958.1|", "55999", "g246", "i0", "97.368", "0.223880597014925", "38", "1", "4", "0", "918", "955", "1821", "1858", "Stigeoclonium helveticum strain UTEX 441 small-subunit ribosomal RNA (rns) gene, complete sequence; mitochondrial", "blastn", "225", "65.8", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Chaetophorales", "Chaetophoraceae", "Stigeoclonium", "Stigeoclonium helveticum"], [25116764, "PRJNA909412_P_NODE_6580_length_205_cov_1.313253_g6439_i0", "PRJNA909412", "6580", "205", "1.313253", "2.69216865", "Flechtneria rotunda", "269715", "Plants", "Plants", "363", "7.279999999999998e-96", "", "NTclustered", "gi|523583541|gb|KC145438.1|", "269715", "g6439", "i0", "98.537", "99.6682926829268", "205", "3", "100", "0", "1", "205", "356", "560", "Scenedesmus rotundus strain BCP-SEV2VF49 28S ribosomal RNA gene, partial sequence", "blastn", "20432", "363", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Sphaeropleales", "Scenedesmaceae", "Flechtneria", "Flechtneria rotunda"]], "truncated": false, "filtered_table_rows_count": 15, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_clade\" = :p2 order by rowid limit 101", "params": {"p0": "blastn", "p1": "PRJNA909412", "p2": "core chlorophytes"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA909412&tax_clade=core+chlorophytes", "results": [{"value": "PRJNA909412", "label": "PRJNA909412", "count": 15, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&tax_clade=core+chlorophytes", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA909412&tax_clade=core+chlorophytes", "results": [{"value": "blastn", "label": "blastn", "count": 15, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA909412&tax_clade=core+chlorophytes", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA909412&tax_clade=core+chlorophytes", "results": [{"value": "Eukaryota", "label": "Eukaryota", "count": 15, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA909412&tax_clade=core+chlorophytes&tax_superkingdom=Eukaryota", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA909412&tax_clade=core+chlorophytes", "results": [{"value": "core chlorophytes", "label": "core chlorophytes", "count": 15, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA909412", "selected": true}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA909412&tax_clade=core+chlorophytes", "results": [{"value": "Viridiplantae", "label": "Viridiplantae", "count": 15, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA909412&tax_clade=core+chlorophytes&tax_kingdom=Viridiplantae", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA909412&tax_clade=core+chlorophytes", "results": [{"value": "Chlorophyta", "label": "Chlorophyta", "count": 15, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA909412&tax_clade=core+chlorophytes&tax_phylum=Chlorophyta", "selected": false}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 232.69004699977813}