{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"blastn\", bioproject = \"PRJNA902848\" and tax_clade = \"core chlorophytes\"", "rows": [[4710393, "PRJNA902848_P_NODE_10244_length_282_cov_1.119617_g10194_i0", "PRJNA902848", "10244", "282", "1.119617", "3.15731994", "Chlamydomonas reinhardtii", "3055", "Plants", "Plants", "167", "8.9e-37", "", "NTclustered", "gi|2082253475|ref|XM_001695212.2|", "3055", "g10194", "i0", "79.915", "3.82269503546099", "234", "41", "82", "6", "2", "232", "1589", "1819", "Chlamydomonas reinhardtii uncharacterized protein (CHLRE_09g386750v5), mRNA", "blastn", "1078", "167", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Chlamydomonadales", "Chlamydomonadaceae", "Chlamydomonas", "Chlamydomonas reinhardtii"], [4710781, "PRJNA902848_P_NODE_8304_length_307_cov_1.333333_g8254_i0", "PRJNA902848", "8304", "307", "1.333333", "4.09333231", "Coccomyxa subellipsoidea", "248742", "Plants", "Plants", "211", "4.47e-50", "", "NTclustered", "gi|545367524|ref|XM_005648521.1|", "574566", "g8254", "i0", "83.475", "8.73615635179153", "236", "29", "75", "10", "1", "231", "367", "137", "Coccomyxa subellipsoidea C-169 chloroplast ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit mRNA", "blastn", "2682", "211", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Trebouxiophyceae", null, "Coccomyxaceae", "Coccomyxa", "Coccomyxa subellipsoidea"], [7260058, "PRJNA902848_P_NODE_17346_length_246_cov_1.271676_g17296_i0", "PRJNA902848", "17346", "246", "1.271676", "3.12832296", "Chlamydomonas reinhardtii", "3055", "Plants", "Plants", "267", "7.289999999999999e-67", "", "NTclustered", "gi|27542564|gb|AY171229.1|", "3055", "g17296", "i0", "91.282", "73.5325203252033", "195", "17", "79", "0", "52", "246", "792", "598", "Chlamydomonas reinhardtii light-harvesting complex II protein (Lhcb) mRNA, complete cds; nuclear gene for chloroplast product", "blastn", "18089", "267", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Chlamydomonadales", "Chlamydomonadaceae", "Chlamydomonas", "Chlamydomonas reinhardtii"], [7260069, "PRJNA902848_P_NODE_17806_length_246_cov_0.901734_g17756_i0", "PRJNA902848", "17806", "246", "0.901734", "2.21826564", "Coccomyxa subellipsoidea", "248742", "Plants", "Plants", "250", "7.34e-62", "", "NTclustered", "gi|545359564|ref|XM_005645183.1|", "574566", "g17756", "i0", "90.86", "2.38211382113821", "186", "17", "76", "0", "38", "223", "3", "188", "Coccomyxa subellipsoidea C-169 ribosomal protein L38 component of cytosolic 80S ribosome and 60S large subunit partial mRNA", "blastn", "586", "250", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Trebouxiophyceae", null, "Coccomyxaceae", "Coccomyxa", "Coccomyxa subellipsoidea"], [14001068, "PRJNA902848_P_NODE_6451_length_339_cov_1.109023_g6401_i0", "PRJNA902848", "6451", "339", "1.109023", "3.75958797", "Hydrodictyaceae", "3103", "Plants", "Plants", "165", "3.94e-36", "", "NTclustered", "gi|21040380|gb|AF183479.2|", "3105", "g6401", "i0", "95.192", "29.7374631268437", "104", "5", "31", "0", "236", "339", "2493", "2596", "Pediastrum duplex strain UTEX LB 1364 28S ribosomal RNA gene, partial sequence", "blastn", "10081", "165", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Sphaeropleales", "Hydrodictyaceae", "Pediastrum", "Pediastrum duplex"], [14910087, "PRJNA902848_P_NODE_7072_length_327_cov_1.535433_g7022_i0", "PRJNA902848", "7072", "327", "1.535433", "5.02086591", "Monoraphidium neglectum", "145388", "Plants", "Plants", "300", "9.95e-77", "", "NTclustered", "gi|926786183|ref|XM_014046112.1|", "145388", "g7022", "i0", "83.18", "31.4770642201835", "327", "55", "100", "0", "1", "327", "82", "408", "Monoraphidium neglectum 40S ribosomal protein S9-2 mRNA", "blastn", "10293", "300", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Sphaeropleales", "Selenastraceae", "Monoraphidium", "Monoraphidium neglectum"], [16184801, "PRJNA902848_P_NODE_18113_length_245_cov_0.906977_g18063_i0", "PRJNA902848", "18113", "245", "0.906977", "2.22209365", "Chlamydomonas reinhardtii", "3055", "Plants", "Plants", "453", "5.1900000000000006e-123", "", "NTclustered", "gi|2082251605|ref|XM_001701987.2|", "3055", "g18063", "i0", "100", "1", "245", "0", "100", "0", "1", "245", "3120", "3364", "Chlamydomonas reinhardtii uncharacterized protein (CHLRE_07g353450v5), mRNA", "blastn", "245", "453", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Chlamydomonadales", "Chlamydomonadaceae", "Chlamydomonas", "Chlamydomonas reinhardtii"], [18733506, "PRJNA902848_P_NODE_19755_length_243_cov_0.864706_g19705_i0", "PRJNA902848", "19755", "243", "0.864706", "2.10123558", "Coccomyxa subellipsoidea", "248742", "Plants", "Plants", "230", "9.43e-56", "", "NTclustered", "gi|545362485|ref|XM_005646412.1|", "574566", "g19705", "i0", "83.817", "12.0781893004115", "241", "39", "99", "0", "3", "243", "1180", "940", "Coccomyxa subellipsoidea C-169 phosphoglycerate kinase precursor partial mRNA", "blastn", "2935", "230", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Trebouxiophyceae", null, "Coccomyxaceae", "Coccomyxa", "Coccomyxa subellipsoidea"], [20008604, "PRJNA902848_P_NODE_17756_length_246_cov_0.901734_g17706_i0", "PRJNA902848", "17756", "246", "0.901734", "2.21826564", "Coccomyxa subellipsoidea", "248742", "Plants", "Plants", "292", "1.2e-74", "", "NTclustered", "gi|545367589|ref|XM_005648552.1|", "574566", "g17706", "i0", "91.163", "1.1869918699187", "215", "19", "87", "0", "1", "215", "114", "328", "Coccomyxa subellipsoidea C-169 ribosomal protein L37 component of cytosolic 80S ribosome and 60S large subunit mRNA", "blastn", "292", "292", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Trebouxiophyceae", null, "Coccomyxaceae", "Coccomyxa", "Coccomyxa subellipsoidea"], [21284148, "PRJNA902848_P_NODE_8457_length_305_cov_1.439655_g8407_i0", "PRJNA902848", "8457", "305", "1.439655", "4.39094775", "Auxenochlorella pyrenoidosa", "3078", "Plants", "Plants", "433", "8.69e-117", "", "NTclustered", "gi|49473447|gb|AY646197.1|", "3078", "g8407", "i0", "92.409", "20.0295081967213", "303", "23", "99", "0", "3", "305", "374", "72", "Chlorella pyrenoidosa chloroplast light-harvesting complex II (Lhc II) mRNA, partial cds; nuclear gene for chloroplast product", "blastn", "6109", "433", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Trebouxiophyceae", "Chlorellales", "Chlorellaceae", "Auxenochlorella", "Auxenochlorella pyrenoidosa"], [22558686, "PRJNA902848_P_NODE_10038_length_284_cov_1.563981_g9988_i0", "PRJNA902848", "10038", "284", "1.563981", "4.44170604", "Tetraselmis sp. RG-15", "65602", "Plants", "Plants", "259", "1.44e-64", "", "NTclustered", "gi|2407313|gb|AF017998.1|AF017998", "65602", "g9988", "i0", "83.755", "33.3028169014084", "277", "41", "97", "3", "8", "282", "1442", "1168", "Tetraselmis sp. RG-15 chlorophyll a/b binding protein (LHCPII) gene, complete cds", "blastn", "9458", "259", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorodendrophyceae", "Chlorodendrales", "Chlorodendraceae", "Tetraselmis", "Tetraselmis sp. RG-15"], [23834014, "PRJNA902848_P_NODE_12659_length_256_cov_1.240437_g12609_i0", "PRJNA902848", "12659", "256", "1.240437", "3.17551872", "Auxenochlorella pyrenoidosa", "3078", "Plants", "Plants", "379", "9.4e-101", "", "NTclustered", "gi|49473447|gb|AY646197.1|", "3078", "g12609", "i0", "93.359", "74.7578125", "256", "17", "100", "0", "1", "256", "271", "526", "Chlorella pyrenoidosa chloroplast light-harvesting complex II (Lhc II) mRNA, partial cds; nuclear gene for chloroplast product", "blastn", "19138", "379", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Trebouxiophyceae", "Chlorellales", "Chlorellaceae", "Auxenochlorella", "Auxenochlorella pyrenoidosa"]], "truncated": false, "filtered_table_rows_count": 12, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_clade\" = :p2 order by rowid limit 101", "params": {"p0": "blastn", "p1": "PRJNA902848", "p2": "core chlorophytes"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA902848&tax_clade=core+chlorophytes", "results": [{"value": "PRJNA902848", "label": "PRJNA902848", "count": 12, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&tax_clade=core+chlorophytes", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA902848&tax_clade=core+chlorophytes", "results": [{"value": "blastn", "label": "blastn", "count": 12, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA902848&tax_clade=core+chlorophytes", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA902848&tax_clade=core+chlorophytes", "results": [{"value": "Eukaryota", "label": "Eukaryota", "count": 12, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA902848&tax_clade=core+chlorophytes&tax_superkingdom=Eukaryota", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA902848&tax_clade=core+chlorophytes", "results": [{"value": "core chlorophytes", "label": "core chlorophytes", "count": 12, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA902848", "selected": true}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA902848&tax_clade=core+chlorophytes", "results": [{"value": "Viridiplantae", "label": "Viridiplantae", "count": 12, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA902848&tax_clade=core+chlorophytes&tax_kingdom=Viridiplantae", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA902848&tax_clade=core+chlorophytes", "results": [{"value": "Chlorophyta", "label": "Chlorophyta", "count": 12, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA902848&tax_clade=core+chlorophytes&tax_phylum=Chlorophyta", "selected": false}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 194.2158050078433}