{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"blastn\", bioproject = \"PRJNA900028\" and tax_phylum = \"Gemmatimonadota\"", "rows": [[875936, "PRJNA900028_P_NODE_7201_length_402_cov_3.025496_g6456_i0", "PRJNA900028", "7201", "402", "3.025496", "12.16249392", "Gemmatimonas groenlandica", "2732249", "Bacteria", "Bacteria", "390", "7.189999999999999e-104", "", "NTclustered", "gi|1839994010|gb|CP053085.1|", "2732249", "g6456", "i0", "84.352", "100.31592039801", "409", "53", "100", "8", "1", "402", "1103316", "1102912", "Gemmatimonas groenlandica strain TET16 chromosome, complete genome", "blastn", "40327", "390", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", "Gemmatimonadaceae", "Gemmatimonas", "Gemmatimonas groenlandica"], [3425192, "PRJNA900028_P_NODE_113323_length_169_cov_1.700000_g112574_i0", "PRJNA900028", "113323", "169", "1.7", "2.873", "Gemmatimonas phototrophica", "1379270", "Bacteria", "Bacteria", "150", "4.86e-32", "", "NTclustered", "gi|1015602748|gb|CP011454.1|", "1379270", "g112574", "i0", "85.616", "27.3431952662722", "146", "17", "85", "3", "2", "145", "749690", "749547", "Gemmatimonas phototrophica strain AP64, complete genome", "blastn", "4621", "150", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", "Gemmatimonadaceae", "Gemmatimonas", "Gemmatimonas phototrophica"], [3425737, "PRJNA900028_P_NODE_170423_length_163_cov_0.894737_g169674_i0", "PRJNA900028", "170423", "163", "0.894737", "1.45842131", "Gemmatirosa kalamazoonensis", "861299", "Bacteria", "Bacteria", "60.2", "8.12e-5", "", "NTclustered", "gi|575456455|gb|CP007128.1|", "861299", "g169674", "i0", "92.683", "0.809815950920245", "41", "3", "25", "0", "53", "93", "1126595", "1126555", "Gemmatirosa kalamazoonesis strain KBS708, complete genome", "blastn", "132", "60.2", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", "Gemmatimonadaceae", "Gemmatirosa", "Gemmatirosa kalamazoonensis"], [3426261, "PRJNA900028_P_NODE_39283_length_222_cov_1.179191_g38534_i0", "PRJNA900028", "39283", "222", "1.179191", "2.61780402", "Gemmatirosa kalamazoonensis", "861299", "Bacteria", "Bacteria", "219", "1.83e-52", "", "NTclustered", "gi|575456455|gb|CP007128.1|", "861299", "g38534", "i0", "85.135", "82.0135135135135", "222", "24", "98", "8", "3", "219", "3042609", "3042392", "Gemmatirosa kalamazoonesis strain KBS708, complete genome", "blastn", "18207", "219", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", "Gemmatimonadaceae", "Gemmatirosa", "Gemmatirosa kalamazoonensis"], [3426728, "PRJNA900028_P_NODE_783_length_1530_cov_3.674544_g397_i0", "PRJNA900028", "783", "1530", "3.674544", "56.2205232", "Gemmatirosa kalamazoonensis", "861299", "Bacteria", "Bacteria", "2084", "0", "", "NTclustered", "gi|575456455|gb|CP007128.1|", "861299", "g397", "i0", "91.347", "306.165359477124", "1537", "114", "99", "17", "5", "1530", "3043861", "3042333", "Gemmatirosa kalamazoonesis strain KBS708, complete genome", "blastn", "468433", "2084", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", "Gemmatimonadaceae", "Gemmatirosa", "Gemmatirosa kalamazoonensis"], [9803434, "PRJNA900028_P_NODE_4188_length_524_cov_1.566316_g3463_i0", "PRJNA900028", "4188", "524", "1.566316", "8.20749584", "uncultured Gemmatimonadales bacterium", "412054", "Bacteria", "Bacteria", "523", "9.059999999999997e-144", "", "NTclustered", "gi|2874253789|emb|OY969773.1|", "412054", "g3463", "i0", "84.934", "45.9503816793893", "531", "65", "100", "15", "1", "524", "421902", "422424", "MAG: uncultured Gemmatimonadales bacterium isolate MFD04580.bin.2.49 genome assembly, chromosome: 1", "blastn", "24078", "523", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", null, null, "uncultured Gemmatimonadales bacterium"], [16177702, "PRJNA900028_P_NODE_173433_length_163_cov_0.894737_g172684_i0", "PRJNA900028", "173433", "163", "0.894737", "1.45842131", "uncultured Gemmatimonadales bacterium", "412054", "Bacteria", "Bacteria", "158", "2.8e-34", "", "NTclustered", "gi|2874253755|emb|OY969695.1|", "412054", "g172684", "i0", "85.161", "78.7423312883436", "155", "21", "94", "2", "1", "154", "197945", "198098", "MAG: uncultured Gemmatimonadales bacterium isolate MFD04967.bin.1.34 genome assembly, chromosome: 1", "blastn", "12835", "158", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", null, null, "uncultured Gemmatimonadales bacterium"], [17453119, "PRJNA900028_P_NODE_165614_length_163_cov_1.324561_g164865_i0", "PRJNA900028", "165614", "163", "1.324561", "2.15903443", "Gemmatirosa kalamazoonensis", "861299", "Bacteria", "Bacteria", "191", "2.76e-44", "", "NTclustered", "gi|575456455|gb|CP007128.1|", "861299", "g164865", "i0", "89.241", "71.0490797546012", "158", "10", "94", "4", "1", "154", "3042777", "3042623", "Gemmatirosa kalamazoonesis strain KBS708, complete genome", "blastn", "11581", "191", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", "Gemmatimonadaceae", "Gemmatirosa", "Gemmatirosa kalamazoonensis"], [18727305, "PRJNA900028_P_NODE_67535_length_190_cov_1.446809_g66786_i0", "PRJNA900028", "67535", "190", "1.446809", "2.7489371", "Gemmatimonas groenlandica", "2732249", "Bacteria", "Bacteria", "237", "4.2e-58", "", "NTclustered", "gi|1839994010|gb|CP053085.1|", "2732249", "g66786", "i0", "89.84", "9.47894736842105", "187", "16", "97", "3", "1", "185", "1102850", "1103035", "Gemmatimonas groenlandica strain TET16 chromosome, complete genome", "blastn", "1801", "237", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", "Gemmatimonadaceae", "Gemmatimonas", "Gemmatimonas groenlandica"], [20371366, "PRJNA900028_P_NODE_197316_length_161_cov_0.910714_g196567_i0", "PRJNA900028", "197316", "161", "0.910714", "1.46624954", "FCB group", "1783270", "Bacteria", "Bacteria", "69.4", "1.33e-7", "", "NTclustered", "gi|575456455|gb|CP007128.1|", "861299", "g196567", "i0", "90.566", "50.8571428571429", "53", "3", "32", "2", "99", "150", "2688479", "2688428", "Gemmatirosa kalamazoonesis strain KBS708, complete genome", "blastn", "8188", "69.4", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", "Gemmatimonadaceae", "Gemmatirosa", "Gemmatirosa kalamazoonensis"], [22552021, "PRJNA900028_P_NODE_192498_length_161_cov_0.910714_g191749_i0", "PRJNA900028", "192498", "161", "0.910714", "1.46624954", "uncultured Gemmatimonadales bacterium", "412054", "Bacteria", "Bacteria", "108", "2.81e-19", "", "NTclustered", "gi|2874253978|emb|OY970303.1|", "412054", "g191749", "i0", "83.333", "22.5217391304348", "120", "16", "73", "3", "40", "157", "4033149", "4033032", "MAG: uncultured Gemmatimonadales bacterium isolate MFD01275.bin.c.12 genome assembly, chromosome: 1", "blastn", "3626", "108", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", null, null, "uncultured Gemmatimonadales bacterium"], [22552950, "PRJNA900028_P_NODE_89158_length_181_cov_1.159091_g88409_i0", "PRJNA900028", "89158", "181", "1.159091", "2.09795471", "Gemmatimonadota bacterium", "2026742", "Bacteria", "Bacteria", "58.4", "3.3e-4", "", "NTclustered", "gi|2621703971|emb|OY762926.1|", "2026742", "g88409", "i0", "97.059", "0.497237569060773", "34", "1", "19", "0", "40", "73", "503986", "503953", "MAG: Gemmatimonadota bacterium isolate 6e3ee631-f785-49ea-85f7-2f24cfa146af genome assembly, chromosome: 1", "blastn", "90", "58.4", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", null, null, null, null, "Gemmatimonadota bacterium"]], "truncated": false, "filtered_table_rows_count": 12, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "blastn", "p1": "PRJNA900028", "p2": "Gemmatimonadota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA900028&tax_phylum=Gemmatimonadota", "results": [{"value": "PRJNA900028", "label": "PRJNA900028", "count": 12, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&tax_phylum=Gemmatimonadota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA900028&tax_phylum=Gemmatimonadota", "results": [{"value": "blastn", "label": "blastn", "count": 12, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA900028&tax_phylum=Gemmatimonadota", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA900028&tax_phylum=Gemmatimonadota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 12, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA900028&tax_phylum=Gemmatimonadota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA900028&tax_phylum=Gemmatimonadota", "results": [{"value": "FCB group", "label": "FCB group", "count": 12, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA900028&tax_phylum=Gemmatimonadota&tax_clade=FCB+group", "selected": false}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA900028&tax_phylum=Gemmatimonadota", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 12, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA900028&tax_phylum=Gemmatimonadota&tax_kingdom=Pseudomonadati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA900028&tax_phylum=Gemmatimonadota", "results": [{"value": "Gemmatimonadota", "label": "Gemmatimonadota", "count": 12, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA900028", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 257.73304699941946}