{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"blastn\", bioproject = \"PRJNA885753\" and tax_kingdom = \"Viridiplantae\"", "rows": [[2516923, "PRJNA885753_S_NODE_2742_length_281_cov_2.399038_g2724_i0", "PRJNA885753", "2742", "281", "2.399038", "6.74129678", "Oryza", "4527", "Plants", "Plants", "520", "5.909999999999999e-143", "", "NTclustered", "gi|815859367|gb|KM036293.1|", "4528", "g2724", "i0", "100", "109.259786476868", "281", "0", "100", "0", "1", "281", "2684", "2404", "Oryza longistaminata 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 26S ribosomal RNA gene, complete sequence", "blastn", "30702", "520", "1", "Eukaryota", "Embryophyta", "Viridiplantae", "Streptophyta", "Magnoliopsida", "Poales", "Poaceae", "Oryza", "Oryza longistaminata"], [3793273, "PRJNA885753_S_NODE_1143_length_399_cov_6.061350_g1125_i0", "PRJNA885753", "1143", "399", "6.06135", "24.1847865", "Streptophyta", "35493", "Plants", "Plants", "726", "0", "", "NTclustered", "gi|30527338|gb|AY095475.1|", "3311", "g1125", "i0", "99.5", "100.250626566416", "400", "0", "99", "1", "1", "398", "1436", "1835", "Ginkgo biloba 26S ribosomal RNA gene, partial sequence", "blastn", "40000", "726", "1", "Eukaryota", "Embryophyta", "Viridiplantae", "Streptophyta", "Ginkgoopsida", "Ginkgoales", "Ginkgoaceae", "Ginkgo", "Ginkgo biloba"], [8514609, "PRJNA885753_S_NODE_2207_length_306_cov_1.000000_g2189_i0", "PRJNA885753", "2207", "306", "1", "3.06", "Hordeum vulgare", "4513", "Plants", "Plants", "566", "8.239999999999998e-157", "", "NTclustered", "gi|326497356|dbj|AK371065.1|", "112509", "g2189", "i0", "100", "1.94117647058824", "306", "0", "100", "0", "1", "306", "349", "654", "Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2123O06", "blastn", "594", "566", "1", "Eukaryota", "Embryophyta", "Viridiplantae", "Streptophyta", "Magnoliopsida", "Poales", "Poaceae", "Hordeum", "Hordeum vulgare"], [12340859, "PRJNA885753_S_NODE_2650_length_285_cov_1.929245_g2632_i0", "PRJNA885753", "2650", "285", "1.929245", "5.49834825", "Cryptomeria japonica", "3369", "Plants", "Plants", "516", "7.77e-142", "", "NTclustered", "gi|2571297752|ref|XR_009362071.1|", "3369", "g2632", "i0", "99.298", "100", "285", "2", "100", "0", "1", "285", "299", "15", "PREDICTED: Cryptomeria japonica 28S ribosomal RNA (LOC131863136), rRNA", "blastn", "28500", "516", "1", "Eukaryota", "Embryophyta", "Viridiplantae", "Streptophyta", "Pinopsida", "Cupressales", "Cupressaceae", "Cryptomeria", "Cryptomeria japonica"], [17439919, "PRJNA885753_S_NODE_3994_length_248_cov_1.782857_g3976_i0", "PRJNA885753", "3994", "248", "1.782857", "4.42148536", "Calluna vulgaris", "13385", "Plants", "Plants", "56.5", "0.002", "", "NTclustered", "gi|2917566876|emb|OZ228610.1|", "13385", "g3976", "i0", "97.059", "0.814516129032258", "34", "0", "13", "1", "125", "157", "49713335", "49713368", "Calluna vulgaris genome assembly, chromosome: 7", "blastn", "202", "56.5", "1", "Eukaryota", "Embryophyta", "Viridiplantae", "Streptophyta", "Magnoliopsida", "Ericales", "Ericaceae", "Calluna", "Calluna vulgaris"], [20367714, "PRJNA885753_S_NODE_2296_length_302_cov_0.908297_g2278_i0", "PRJNA885753", "2296", "302", "0.908297", "2.7430569400000002", "Eukaryota", "2759", "Plants", "Plants", "553", "6.32e-153", "", "NTclustered", "gi|194703603|gb|BT040881.1|", "4577", "g2278", "i0", "99.669", "77.3443708609272", "302", "1", "100", "0", "1", "302", "791", "1092", "Zea mays full-length cDNA clone ZM_BFc0144J03 mRNA, complete cds", "blastn", "23358", "558", "0.991039426523297", "Eukaryota", "Embryophyta", "Viridiplantae", "Streptophyta", "Magnoliopsida", "Poales", "Poaceae", "Zea", "Zea mays"], [20367715, "PRJNA885753_S_NODE_2656_length_285_cov_1.650943_g2638_i0", "PRJNA885753", "2656", "285", "1.650943", "4.70518755", "Oryza", "4527", "Plants", "Plants", "527", "3.59e-145", "", "NTclustered", "gi|780981400|gb|KM117266.1|", "4529", "g2638", "i0", "100", "108.99298245614", "285", "0", "100", "0", "1", "285", "952", "668", "Oryza rufipogon 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 26S ribosomal RNA gene, complete sequence", "blastn", "31063", "527", "1", "Eukaryota", "Embryophyta", "Viridiplantae", "Streptophyta", "Magnoliopsida", "Poales", "Poaceae", "Oryza", "Oryza rufipogon"], [21263700, "PRJNA885753_S_NODE_3257_length_263_cov_1.078947_g3239_i0", "PRJNA885753", "3257", "263", "1.078947", "2.83763061", "Tripterygium wilfordii", "458696", "Plants", "Plants", "75", "5.12e-9", "", "NTclustered", "gi|1954764206|ref|XM_038831111.1|", "458696", "g3239", "i0", "89.655", "3.77186311787072", "58", "6", "22", "0", "164", "221", "629", "572", "PREDICTED: Tripterygium wilfordii 60S ribosomal protein L9-like (LOC119986525), mRNA", "blastn", "992", "75", "1", "Eukaryota", "Embryophyta", "Viridiplantae", "Streptophyta", "Magnoliopsida", "Celastrales", "Celastraceae", "Tripterygium", "Tripterygium wilfordii"], [24192871, "PRJNA885753_S_NODE_2999_length_271_cov_1.525253_g2981_i0", "PRJNA885753", "2999", "271", "1.525253", "4.13343563", "root", "1", "Root_unresolved", "Root_unresolved", "501", "2.05e-137", "", "NTclustered", "gi|1714003650|gb|MN243923.1|", "3079", "g2981", "i0", "100", "99.9151291512915", "271", "0", "100", "0", "1", "271", "586", "856", "Chlorella sp. isolate CAVR01 small subunit ribosomal RNA gene, partial sequence", "blastn", "27077", "501", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Trebouxiophyceae", "Chlorellales", "Chlorellaceae", "Chlorella", "Chlorella sp."], [25468011, "PRJNA885753_S_NODE_2700_length_283_cov_2.100000_g2682_i0", "PRJNA885753", "2700", "283", "2.1", "5.943", "Streptophyta", "35493", "Plants", "Plants", "472", "1.6899999999999998e-128", "", "NTclustered", "gi|374347430|dbj|AB107898.1|", "3371", "g2682", "i0", "100", "90.1060070671378", "255", "0", "90", "0", "29", "283", "20", "274", "Metasequoia glyptostroboides gene for 18S ribosomal RNA, complete cds", "blastn", "25500", "472", "1", "Eukaryota", "Embryophyta", "Viridiplantae", "Streptophyta", "Pinopsida", "Cupressales", "Cupressaceae", "Metasequoia", "Metasequoia glyptostroboides"], [25468019, "PRJNA885753_S_NODE_4340_length_244_cov_2.005848_g4322_i0", "PRJNA885753", "4340", "244", "2.005848", "4.89426912", "Streptophyta", "35493", "Plants", "Plants", "446", "8.639999999999999e-121", "", "NTclustered", "gi|125662660|gb|EF053174.1|", "3371", "g4322", "i0", "99.59", "100", "244", "1", "100", "0", "1", "244", "598", "841", "Metasequoia glyptostroboides isolate 110 18S ribosomal RNA gene, partial sequence", "blastn", "24400", "446", "1", "Eukaryota", "Embryophyta", "Viridiplantae", "Streptophyta", "Pinopsida", "Cupressales", "Cupressaceae", "Metasequoia", "Metasequoia glyptostroboides"]], "truncated": false, "filtered_table_rows_count": 11, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_kingdom\" = :p2 order by rowid limit 101", "params": {"p0": "blastn", "p1": "PRJNA885753", "p2": "Viridiplantae"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA885753&tax_kingdom=Viridiplantae", "results": [{"value": "PRJNA885753", "label": "PRJNA885753", "count": 11, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&tax_kingdom=Viridiplantae", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA885753&tax_kingdom=Viridiplantae", "results": [{"value": "blastn", "label": "blastn", "count": 11, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA885753&tax_kingdom=Viridiplantae", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA885753&tax_kingdom=Viridiplantae", "results": [{"value": "Eukaryota", "label": "Eukaryota", "count": 11, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA885753&tax_kingdom=Viridiplantae&tax_superkingdom=Eukaryota", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA885753&tax_kingdom=Viridiplantae", "results": [{"value": "Embryophyta", "label": "Embryophyta", "count": 10, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA885753&tax_kingdom=Viridiplantae&tax_clade=Embryophyta", "selected": false}, {"value": "core chlorophytes", "label": "core chlorophytes", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA885753&tax_kingdom=Viridiplantae&tax_clade=core+chlorophytes", "selected": false}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA885753&tax_kingdom=Viridiplantae", "results": [{"value": "Viridiplantae", "label": "Viridiplantae", "count": 11, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA885753", "selected": true}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA885753&tax_kingdom=Viridiplantae", "results": [{"value": "Streptophyta", "label": "Streptophyta", "count": 10, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA885753&tax_kingdom=Viridiplantae&tax_phylum=Streptophyta", "selected": false}, {"value": "Chlorophyta", "label": "Chlorophyta", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA885753&tax_kingdom=Viridiplantae&tax_phylum=Chlorophyta", "selected": false}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 193.9443239971297}