{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"blastn\", bioproject = \"PRJNA867519\" and tax_phylum = \"Nematoda\"", "rows": [[848070, "PRJNA867519_P_NODE_21121_length_271_cov_1.166667_g20967_i0", "PRJNA867519", "21121", "271", "1.166667", "3.16166757", "Pristionchus hoplostomus", "1355913", "Nematoda", "Nematoda", "159", "1.42e-34", "", "NTclustered", "gi|524845304|gb|KC819362.1|", "1355913", "g20967", "i0", "79.556", "6.38376383763838", "225", "44", "83", "2", "14", "237", "260", "37", "Pristionchus hoplostomus strain JU1090 subunit ribosomal protein 35 (rpl-35) mRNA, partial cds", "blastn", "1730", "159", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Rhabditida", "Neodiplogasteridae", "Pristionchus", "Pristionchus hoplostomus"], [4676630, "PRJNA867519_P_NODE_5844_length_448_cov_2.464000_g5690_i0", "PRJNA867519", "5844", "448", "2.464", "11.03872", "Pristionchus pauli", "376545", "Nematoda", "Nematoda", "292", "2.35e-74", "", "NTclustered", "gi|150982019|gb|EF634598.1|", "376545", "g5690", "i0", "81.492", "5.03571428571429", "362", "61", "80", "6", "46", "404", "37", "395", "Pristionchus pauli large subunit ribosomal protein 23 (rpl-23) mRNA, partial cds", "blastn", "2256", "292", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Rhabditida", "Neodiplogasteridae", "Pristionchus", "Pristionchus pauli"], [7226273, "PRJNA867519_P_NODE_17066_length_289_cov_0.824074_g16912_i0", "PRJNA867519", "17066", "289", "0.824074", "2.38157386", "Parapristionchus giblindavisi", "1187980", "Nematoda", "Nematoda", "178", "4.23e-40", "", "NTclustered", "gi|387600364|gb|JQ677914.1|", "1187980", "g16912", "i0", "79.259", "72.7301038062284", "270", "44", "91", "10", "22", "285", "638", "375", "Diplogastridae gen. sp. EJR-2012 large ribosomal protein 2 mRNA, partial cds", "blastn", "21019", "178", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Rhabditida", "Diplogasteridae", "Parapristionchus", "Parapristionchus giblindavisi"], [8500994, "PRJNA867519_P_NODE_23567_length_260_cov_1.235294_g23413_i0", "PRJNA867519", "23567", "260", "1.235294", "3.2117644", "Pristionchus sp. 13 RS5231", "452807", "Nematoda", "Nematoda", "82.4", "3.02e-11", "", "NTclustered", "gi|150982219|gb|EF634698.1|", "452807", "g23413", "i0", "87.324", "1.53461538461538", "71", "9", "27", "0", "176", "246", "71", "1", "Pristionchus sp. 13 RS5231 large subunit ribosomal protein 29 (rpl-29) mRNA, complete cds", "blastn", "399", "82.4", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Rhabditida", "Neodiplogasteridae", "Pristionchus", "Pristionchus sp. 13 RS5231"], [8501059, "PRJNA867519_P_NODE_32307_length_243_cov_0.905882_g32153_i0", "PRJNA867519", "32307", "243", "0.905882", "2.20129326", "Pristionchus uniformis", "358041", "Nematoda", "Nematoda", "165", "2.6999999999999997e-36", "", "NTclustered", "gi|150984659|gb|EF634991.1|", "358041", "g32153", "i0", "82.812", "42.5925925925926", "192", "25", "76", "6", "46", "230", "4", "194", "Pristionchus uniformis small subunit ribosomal protein 28 (rps-28) mRNA, complete cds", "blastn", "10350", "165", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Rhabditida", "Neodiplogasteridae", "Pristionchus", "Pristionchus uniformis"], [11440719, "PRJNA867519_P_NODE_12229_length_331_cov_2.271318_g12075_i0", "PRJNA867519", "12229", "331", "2.271318", "7.51806258", "Opisthokonta", "33154", "Nematoda", "Nematoda", "189", "2.2799999999999993e-43", "", "NTclustered", "gi|150982115|gb|EF634646.1|", "335527", "g12075", "i0", "89.796", "42.2205438066465", "147", "15", "44", "0", "129", "275", "173", "27", "Pristionchus maupasi large subunit ribosomal protein 27a (rpl-27a) mRNA, partial cds", "blastn", "13975", "189", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Rhabditida", "Neodiplogasteridae", "Pristionchus", "Pristionchus maupasi"], [13601908, "PRJNA867519_P_NODE_7111_length_412_cov_2.648968_g6957_i0", "PRJNA867519", "7111", "412", "2.648968", "10.91374816", "Pristionchus sp. 15 RS5229", "452809", "Nematoda", "Nematoda", "254", "1.01e-62", "", "NTclustered", "gi|150982261|gb|EF634719.1|", "452809", "g6957", "i0", "83.333", "13.9077669902913", "276", "42", "67", "4", "110", "383", "303", "30", "Pristionchus sp. 15 RS5229 large subunit ribosomal protein 30 (rpl-30) mRNA, partial cds", "blastn", "5730", "254", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Rhabditida", "Neodiplogasteridae", "Pristionchus", "Pristionchus sp. 15 RS5229"], [14876183, "PRJNA867519_P_NODE_3832_length_537_cov_1.879310_g3680_i0", "PRJNA867519", "3832", "537", "1.87931", "10.0918947", "Strongyloides ratti", "34506", "Nematoda", "Nematoda", "189", "3.85e-43", "", "NTclustered", "gi|1376142591|ref|XM_024651617.1|", "34506", "g3680", "i0", "77.922", "3.49906890130354", "308", "64", "57", "4", "231", "537", "429", "125", "Strongyloides ratti Peptidyl-prolyl cis-trans isomerase D (SRAE_2000074700), partial mRNA", "blastn", "1879", "189", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Rhabditida", "Strongyloididae", "Strongyloides", "Strongyloides ratti"], [18699449, "PRJNA867519_P_NODE_22975_length_262_cov_1.629630_g22821_i0", "PRJNA867519", "22975", "262", "1.62963", "4.2696306", "Strongyloides papillosus", "174720", "Nematoda", "Nematoda", "84.2", "8.48e-12", "", "NTclustered", "gi|690018452|emb|LM525690.1|", "174720", "g22821", "i0", "83.516", "0.347328244274809", "91", "13", "34", "2", "8", "97", "26564", "26475", "Strongyloides papillosus genome assembly S_papillosus_LIN ,scaffold SPAL_contig0000087", "blastn", "91", "84.2", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Rhabditida", "Strongyloididae", "Strongyloides", "Strongyloides papillosus"], [18699572, "PRJNA867519_P_NODE_6635_length_425_cov_1.889205_g6481_i0", "PRJNA867519", "6635", "425", "1.889205", "8.02912125", "Strongyloides papillosus", "174720", "Nematoda", "Nematoda", "315", "4.73e-81", "", "NTclustered", "gi|687022644|emb|LM525558.1|", "174720", "g6481", "i0", "80.324", "57.0235294117647", "432", "71", "100", "11", "1", "425", "232420", "232844", "Strongyloides papillosus genome assembly S_papillosus_LIN ,scaffold SPAL_scaffold0000004", "blastn", "24235", "315", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Rhabditida", "Strongyloididae", "Strongyloides", "Strongyloides papillosus"], [22524746, "PRJNA867519_P_NODE_13878_length_314_cov_2.236515_g13724_i0", "PRJNA867519", "13878", "314", "2.236515", "7.0226571", "Pristionchus bucculentus", "1317126", "Nematoda", "Nematoda", "320", "7.29e-83", "", "NTclustered", "gi|479330856|gb|KC463849.1|", "1317126", "g13724", "i0", "85.342", "88.9108280254777", "307", "45", "98", "0", "1", "307", "329", "23", "Pristionchus bucculentus strain RS5596 small subunit ribosomal protein 14 (rps14) gene, partial cds", "blastn", "27918", "320", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Rhabditida", "Neodiplogasteridae", "Pristionchus", "Pristionchus bucculentus"], [22524895, "PRJNA867519_P_NODE_3738_length_542_cov_2.298507_g3586_i0", "PRJNA867519", "3738", "542", "2.298507", "12.45790794", "Rhabditolaimus sp. 1 VS-2014", "1538706", "Nematoda", "Nematoda", "292", "2.88e-74", "", "NTclustered", "gi|675118995|gb|KJ877377.1|", "1538706", "g3586", "i0", "79.475", "65.0221402214022", "419", "80", "77", "5", "1", "416", "3", "418", "Rhabditolaimus sp. 1 VS-2014 strain RSA134 large subunit ribosomal protein 23 (rpl-23) mRNA, partial cds", "blastn", "35242", "292", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Rhabditida", "Diplogasteridae", "Rhabditolaimus", "Rhabditolaimus sp. 1 VS-2014"], [25074167, "PRJNA867519_P_NODE_18780_length_281_cov_1.480769_g18626_i0", "PRJNA867519", "18780", "281", "1.480769", "4.16096089", "Strongyloides ratti", "34506", "Nematoda", "Nematoda", "189", "1.8899999999999993e-43", "", "NTclustered", "gi|1376143271|ref|XM_024652004.1|", "34506", "g18626", "i0", "81.435", "15.8434163701068", "237", "38", "83", "6", "1", "234", "135", "368", "Strongyloides ratti Histone H2A.v (SRAE_2000109300), partial mRNA", "blastn", "4452", "189", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Rhabditida", "Strongyloididae", "Strongyloides", "Strongyloides ratti"]], "truncated": false, "filtered_table_rows_count": 13, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "blastn", "p1": "PRJNA867519", "p2": "Nematoda"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA867519&tax_phylum=Nematoda", "results": [{"value": "PRJNA867519", "label": "PRJNA867519", "count": 13, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&tax_phylum=Nematoda", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA867519&tax_phylum=Nematoda", "results": [{"value": "blastn", "label": "blastn", "count": 13, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA867519&tax_phylum=Nematoda", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA867519&tax_phylum=Nematoda", "results": [{"value": "Eukaryota", "label": "Eukaryota", "count": 13, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA867519&tax_phylum=Nematoda&tax_superkingdom=Eukaryota", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA867519&tax_phylum=Nematoda", "results": [{"value": "Opisthokonta", "label": "Opisthokonta", "count": 13, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA867519&tax_phylum=Nematoda&tax_clade=Opisthokonta", "selected": false}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA867519&tax_phylum=Nematoda", "results": [{"value": "Metazoa", "label": "Metazoa", "count": 13, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA867519&tax_phylum=Nematoda&tax_kingdom=Metazoa", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA867519&tax_phylum=Nematoda", "results": [{"value": "Nematoda", "label": "Nematoda", "count": 13, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA867519", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 116.04122499920777}