{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"blastn\", bioproject = \"PRJNA849172\" and tax_clade = \"core chlorophytes\"", "rows": [[834358, "PRJNA849172_P_NODE_111001_length_240_cov_2.520958_g110641_i0", "PRJNA849172", "111001", "240", "2.520958", "6.0502992", "Yamagishiella unicocca", "51707", "Plants", "Plants", "52.8", "0.022", "", "NTclustered", "gi|1361864716|dbj|LC314413.1|", "51707", "g110641", "i0", "96.875", "0.4", "32", "0", "13", "1", "76", "106", "242883", "242914", "Yamagishiella unicocca DNA, mating locus, mating-type minus rearranged domain, strain: NIES-3983", "blastn", "96", "52.8", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Chlamydomonadales", "Volvocaceae", "Yamagishiella", "Yamagishiella unicocca"], [2109780, "PRJNA849172_P_NODE_109042_length_241_cov_14.208333_g108682_i0", "PRJNA849172", "109042", "241", "14.208333", "34.24208253", "Nannochloris normandinae", "926285", "Plants", "Plants", "429", "8.58e-116", "", "NTclustered", "gi|922575245|gb|JQ921007.1|", "926285", "g108682", "i0", "98.755", "109.643153526971", "241", "3", "100", "0", "1", "241", "769", "529", "Nannochloris normandinae strain SAG 9.82 23S large subunit ribosomal RNA gene, partial sequence; chloroplast", "blastn", "26424", "429", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Trebouxiophyceae", "Chlorellales", "Chlorellaceae", "Nannochloris", "Nannochloris normandinae"], [4662643, "PRJNA849172_P_NODE_105004_length_243_cov_7.670588_g104644_i0", "PRJNA849172", "105004", "243", "7.670588", "18.63952884", "Pseudochlorella signiensis", "173497", "Plants", "Plants", "335", "1.9399999999999993e-87", "", "NTclustered", "gi|725650714|ref|NC_025529.1|", "173497", "g104644", "i0", "94.47", "107.670781893004", "217", "12", "89", "0", "27", "243", "150053", "150269", "Pabia signiensis culture-collection SAG:7.90 chloroplast, complete genome", "blastn", "26164", "335", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Trebouxiophyceae", "Chlorellales", "Chlorellaceae", "Pseudochlorella", "Pseudochlorella signiensis"], [10160791, "PRJNA849172_P_NODE_18428_length_482_cov_18.315403_g18069_i0", "PRJNA849172", "18428", "482", "18.315403", "88.28024246", "Chlorellales", "35460", "Plants", "Plants", "143", "2.71e-29", "", "NTclustered", "gi|404276808|gb|JQ655149.1|", "3077", "g18069", "i0", "78.541", "9.53319502074689", "233", "38", "47", "10", "257", "482", "2128", "1901", "Chlorella vulgaris heat shock protein 90 mRNA, complete cds", "blastn", "4595", "143", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Trebouxiophyceae", "Chlorellales", "Chlorellaceae", "Chlorella", "Chlorella vulgaris"], [10161560, "PRJNA849172_P_NODE_86808_length_253_cov_20.494444_g86448_i0", "PRJNA849172", "86808", "253", "20.494444", "51.85094332", "Stichococcaceae", "2910630", "Plants", "Plants", "457", "4.16e-124", "", "NTclustered", "gi|1518373087|gb|MK201750.1|", "29647", "g86448", "i0", "99.209", "99.798418972332", "253", "2", "100", "0", "1", "253", "792", "1044", "Stichococcus sp. strain KZ-5-1-1 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence", "blastn", "25249", "457", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Trebouxiophyceae", "Prasiolales", "Stichococcaceae", "Stichococcus", "Stichococcus sp."], [13590927, "PRJNA849172_P_NODE_72791_length_266_cov_17.321244_g72431_i0", "PRJNA849172", "72791", "266", "17.321244", "46.07450904", "Jenufa perforata", "993091", "Plants", "Plants", "62.1", "4.04e-5", "", "NTclustered", "gi|1829768140|ref|NC_046779.1|", "993091", "g72431", "i0", "92.857", "0.665413533834586", "42", "3", "16", "0", "5", "46", "616", "575", "Jenufa perforata culture CAUP:H8101 mitochondrion, complete genome", "blastn", "177", "62.1", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", null, null, "Jenufa", "Jenufa perforata"], [19962679, "PRJNA849172_P_NODE_40596_length_324_cov_10.988048_g40236_i0", "PRJNA849172", "40596", "324", "10.988048", "35.60127552", "Chromochloris zofingiensis", "31302", "Plants", "Plants", "405", "2.03e-108", "", "NTclustered", "gi|674840721|ref|NC_024758.1|", "31302", "g40236", "i0", "89.231", "1.00308641975309", "325", "33", "99", "2", "1", "323", "40409", "40733", "Chromochloris zofingiensis strain UTEX 56 mitochondrion, complete genome", "blastn", "325", "405", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Sphaeropleales", "Chromochloridaceae", "Chromochloris", "Chromochloris zofingiensis"], [21236717, "PRJNA849172_P_NODE_120377_length_231_cov_6.000000_g120017_i0", "PRJNA849172", "120377", "231", "6", "13.86", "Prototheca lentecrescens", "2836214", "Plants", "Plants", "84.2", "7.32e-12", "", "NTclustered", "gi|2038040444|gb|MZ198751.1|", "2836214", "g120017", "i0", "79.339", "11.8831168831169", "121", "23", "52", "2", "14", "133", "1129", "1010", "Prototheca lentecrescens strain PK1 small subunit ribosomal RNA gene, partial sequence", "blastn", "2745", "84.2", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Trebouxiophyceae", "Chlorellales", "Chlorellaceae", "Prototheca", "Prototheca lentecrescens"], [22910598, "PRJNA849172_P_NODE_80878_length_259_cov_1.672043_g80518_i0", "PRJNA849172", "80878", "259", "1.672043", "4.33059137", "Borodinellopsis", "1148059", "Plants", "Plants", "147", "1.0500000000000001e-30", "", "NTclustered", "gi|1509777659|gb|MG778126.1|", "1148060", "g80518", "i0", "94.792", "34.4478764478764", "96", "2", "36", "3", "123", "215", "19408", "19313", "Borodinellopsis texensis heme attachment to plastid cytochrome c (ccsA), photosystem II reaction center Z protein (psbZ), M protein of photosystem II (psbM), ribosomal protein S14 (rps14), ribosomal protein S7 (rps7), and ATP synthase CF1 epsilon subunit (atpE) genes, complete cds; tRNA-Leu (trnL-UAA) gene, complete sequence; ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; tRNA-Asp (trnD-GUC) gene, complete sequence; CP47 chlorophyll apoprotein of photosystem II (psbB), hypothetical protein (psbB), photosystem II protein T (psbT), photosystem II protein N (psbN), and photosystem II protein H (psbH) genes, complete cds; tRNA-Glu (trnE-UUC) gene, complete sequence; and photosystem II protein V (psbE) and ribosomal protein S9 (rps9) genes, complete cds; chloroplast", "blastn", "8922", "147", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Chlamydomonadales", "Chlorococcaceae", "Borodinellopsis", "Borodinellopsis texensis"], [25061926, "PRJNA849172_P_NODE_2300_length_1453_cov_21.331884_g2134_i0", "PRJNA849172", "2300", "1453", "21.331884", "309.95227452", "Haematococcus lacustris", "44745", "Plants", "Plants", "1297", "0", "", "NTclustered", "gi|1279575454|gb|MF683078.1|", "44745", "g2134", "i0", "83.391", "245.563661390227", "1445", "195", "98", "39", "3", "1427", "3556", "2137", "Haematococcus lacustris 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast", "blastn", "356804", "1297", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Chlamydomonadales", "Haematococcaceae", "Haematococcus", "Haematococcus lacustris"], [25062603, "PRJNA849172_P_NODE_45760_length_308_cov_14.051064_g45400_i0", "PRJNA849172", "45760", "308", "14.051064", "43.27727712", "Chlamydomonas reinhardtii", "3055", "Plants", "Plants", "219", "2.68e-52", "", "NTclustered", "gi|18243|emb|X60826.1|", "3055", "g45400", "i0", "85.577", "18.5551948051948", "208", "30", "68", "0", "101", "308", "399", "192", "C.reinhardtii UBI3 mRNA for ubiquitin-fusion protein (UbCEP52)", "blastn", "5715", "219", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Chlamydomonadales", "Chlamydomonadaceae", "Chlamydomonas", "Chlamydomonas reinhardtii"]], "truncated": false, "filtered_table_rows_count": 11, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_clade\" = :p2 order by rowid limit 101", "params": {"p0": "blastn", "p1": "PRJNA849172", "p2": "core chlorophytes"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA849172&tax_clade=core+chlorophytes", "results": [{"value": "PRJNA849172", "label": "PRJNA849172", "count": 11, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&tax_clade=core+chlorophytes", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA849172&tax_clade=core+chlorophytes", "results": [{"value": "blastn", "label": "blastn", "count": 11, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA849172&tax_clade=core+chlorophytes", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA849172&tax_clade=core+chlorophytes", "results": [{"value": "Eukaryota", "label": "Eukaryota", "count": 11, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA849172&tax_clade=core+chlorophytes&tax_superkingdom=Eukaryota", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA849172&tax_clade=core+chlorophytes", "results": [{"value": "core chlorophytes", "label": "core chlorophytes", "count": 11, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA849172", "selected": true}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA849172&tax_clade=core+chlorophytes", "results": [{"value": "Viridiplantae", "label": "Viridiplantae", "count": 11, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA849172&tax_clade=core+chlorophytes&tax_kingdom=Viridiplantae", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA849172&tax_clade=core+chlorophytes", "results": [{"value": "Chlorophyta", "label": "Chlorophyta", "count": 11, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA849172&tax_clade=core+chlorophytes&tax_phylum=Chlorophyta", "selected": false}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 222.5758330023382}