{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"blastn\", bioproject = \"PRJNA773247\" and tax_phylum = \"Gemmatimonadota\"", "rows": [[749167, "PRJNA773247_P_NODE_941_length_1972_cov_14.222749_g922_i0", "PRJNA773247", "941", "1972", "14.222749", "280.47261028", "Gemmatirosa kalamazoonensis", "861299", "Bacteria", "Bacteria", "503", "4.68e-137", "", "NTclustered", "gi|575456455|gb|CP007128.1|", "861299", "g922", "i0", "76.271", "33.3108519269777", "1062", "184", "51", "53", "212", "1224", "2572046", "2571004", "Gemmatirosa kalamazoonesis strain KBS708, complete genome", "blastn", "65689", "503", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", "Gemmatimonadaceae", "Gemmatirosa", "Gemmatirosa kalamazoonensis"], [2024939, "PRJNA773247_P_NODE_34602_length_241_cov_4.279762_g34518_i0", "PRJNA773247", "34602", "241", "4.279762", "10.31422642", "Gemmatimonas aurantiaca", "173480", "Bacteria", "Bacteria", "97.1", "9.88e-16", "", "NTclustered", "gi|226088597|dbj|AP009153.1|", "379066", "g34518", "i0", "95.161", "3.56016597510373", "62", "1", "25", "2", "182", "241", "436789", "436728", "Gemmatimonas aurantiaca T-27 DNA, complete genome", "blastn", "858", "97.1", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", "Gemmatimonadaceae", "Gemmatimonas", "Gemmatimonas aurantiaca"], [3299851, "PRJNA773247_P_NODE_12143_length_439_cov_2.633880_g12060_i0", "PRJNA773247", "12143", "439", "2.63388", "11.5627332", "uncultured Gemmatimonadales bacterium", "412054", "Bacteria", "Bacteria", "209", "2.38e-49", "", "NTclustered", "gi|2874253728|emb|OY969570.1|", "412054", "g12060", "i0", "80.208", "17.4783599088838", "288", "49", "65", "8", "1", "284", "5761202", "5761485", "MAG: uncultured Gemmatimonadales bacterium isolate MFD02840.bin.c.1 genome assembly, chromosome: 1", "blastn", "7673", "209", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", null, null, "uncultured Gemmatimonadales bacterium"], [3299968, "PRJNA773247_P_NODE_19503_length_326_cov_2.569170_g19419_i0", "PRJNA773247", "19503", "326", "2.56917", "8.3754942", "uncultured Gemmatimonadales bacterium", "412054", "Bacteria", "Bacteria", "178", "4.85e-40", "", "NTclustered", "gi|2874253938|emb|OY970263.1|", "412054", "g19419", "i0", "79.537", "41.4846625766871", "259", "45", "78", "8", "6", "260", "1854997", "1855251", "MAG: uncultured Gemmatimonadales bacterium isolate MFD02416.bin.2.26 genome assembly, chromosome: 1", "blastn", "13524", "178", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", null, null, "uncultured Gemmatimonadales bacterium"], [4576958, "PRJNA773247_P_NODE_14424_length_394_cov_1.514019_g14340_i0", "PRJNA773247", "14424", "394", "1.514019", "5.96523486", "Gemmatimonas aurantiaca", "173480", "Bacteria", "Bacteria", "287", "9.490000000000001e-73", "", "NTclustered", "gi|226088597|dbj|AP009153.1|", "379066", "g14340", "i0", "80.992", "0.921319796954315", "363", "67", "92", "2", "30", "391", "813984", "813623", "Gemmatimonas aurantiaca T-27 DNA, complete genome", "blastn", "363", "287", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", "Gemmatimonadaceae", "Gemmatimonas", "Gemmatimonas aurantiaca"], [6310980, "PRJNA773247_P_NODE_11265_length_461_cov_10.247423_g11182_i0", "PRJNA773247", "11265", "461", "10.247423", "47.24062003", "FCB group", "1783270", "Bacteria", "Bacteria", "272", "3.1599999999999992e-68", "", "NTclustered", "gi|575456455|gb|CP007128.1|", "861299", "g11182", "i0", "78.588", "55.9718004338395", "425", "81", "91", "8", "25", "444", "4458755", "4458336", "Gemmatirosa kalamazoonesis strain KBS708, complete genome", "blastn", "25803", "272", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", "Gemmatimonadaceae", "Gemmatirosa", "Gemmatirosa kalamazoonensis"], [7127722, "PRJNA773247_P_NODE_34606_length_241_cov_4.053571_g34522_i0", "PRJNA773247", "34606", "241", "4.053571", "9.76910611", "Gemmatimonas groenlandica", "2732249", "Bacteria", "Bacteria", "189", "1.58e-43", "", "NTclustered", "gi|1839994010|gb|CP053085.1|", "2732249", "g34522", "i0", "86.905", "8.12033195020747", "168", "22", "70", "0", "37", "204", "282221", "282388", "Gemmatimonas groenlandica strain TET16 chromosome, complete genome", "blastn", "1957", "189", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", "Gemmatimonadaceae", "Gemmatimonas", "Gemmatimonas groenlandica"], [10953115, "PRJNA773247_P_NODE_35469_length_236_cov_4.723926_g35385_i0", "PRJNA773247", "35469", "236", "4.723926", "11.14846536", "Gemmatimonas groenlandica", "2732249", "Bacteria", "Bacteria", "215", "2.55e-51", "", "NTclustered", "gi|1839994010|gb|CP053085.1|", "2732249", "g35385", "i0", "84.545", "0.932203389830508", "220", "30", "92", "4", "18", "235", "4102851", "4103068", "Gemmatimonas groenlandica strain TET16 chromosome, complete genome", "blastn", "220", "215", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", "Gemmatimonadaceae", "Gemmatimonas", "Gemmatimonas groenlandica"], [13502423, "PRJNA773247_P_NODE_14271_length_396_cov_3.854489_g14187_i0", "PRJNA773247", "14271", "396", "3.854489", "15.263776439999999", "Longimicrobiales bacterium", "2910168", "Bacteria", "Bacteria", "215", "4.5700000000000003e-51", "", "NTclustered", "gi|2893356056|emb|OZ220479.1|", "2910168", "g14187", "i0", "84.071", "49.1439393939394", "226", "32", "57", "4", "1", "224", "2920303", "2920526", "MAG: Longimicrobiales bacterium isolate ffc3e9c5-5d9e-49e8-9e51-7ae5a16491fe genome assembly, chromosome: 1", "blastn", "19461", "215", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Longimicrobiia", "Longimicrobiales", null, null, "Longimicrobiales bacterium"], [13502610, "PRJNA773247_P_NODE_25911_length_274_cov_3.532338_g25827_i0", "PRJNA773247", "25911", "274", "3.532338", "9.67860612", "uncultured Gemmatimonadales bacterium", "412054", "Bacteria", "Bacteria", "346", "1.03e-90", "", "NTclustered", "gi|2874253789|emb|OY969773.1|", "412054", "g25827", "i0", "89.781", "7.27372262773723", "274", "22", "99", "6", "4", "274", "422236", "421966", "MAG: uncultured Gemmatimonadales bacterium isolate MFD04580.bin.2.49 genome assembly, chromosome: 1", "blastn", "1993", "346", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", null, null, "uncultured Gemmatimonadales bacterium"], [14777986, "PRJNA773247_P_NODE_8892_length_537_cov_13.273707_g8809_i0", "PRJNA773247", "8892", "537", "13.273707", "71.27980659", "Gemmatimonas phototrophica", "1379270", "Bacteria", "Bacteria", "324", "1.01e-83", "", "NTclustered", "gi|1015602748|gb|CP011454.1|", "1379270", "g8809", "i0", "77.716", "1.01117318435754", "543", "111", "99", "8", "3", "537", "2331583", "2332123", "Gemmatimonas phototrophica strain AP64, complete genome", "blastn", "543", "324", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", "Gemmatimonadaceae", "Gemmatimonas", "Gemmatimonas phototrophica"], [19875671, "PRJNA773247_P_NODE_30116_length_251_cov_2.089888_g30032_i0", "PRJNA773247", "30116", "251", "2.089888", "5.24561888", "Gemmatimonas groenlandica", "2732249", "Bacteria", "Bacteria", "202", "2.13e-47", "", "NTclustered", "gi|1839994010|gb|CP053085.1|", "2732249", "g30032", "i0", "81.746", "1.00398406374502", "252", "36", "98", "8", "5", "251", "3713118", "3712872", "Gemmatimonas groenlandica strain TET16 chromosome, complete genome", "blastn", "252", "202", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", "Gemmatimonadaceae", "Gemmatimonas", "Gemmatimonas groenlandica"], [21151485, "PRJNA773247_P_NODE_27517_length_265_cov_2.020833_g27433_i0", "PRJNA773247", "27517", "265", "2.020833", "5.35520745", "Longimicrobiales bacterium", "2910168", "Bacteria", "Bacteria", "52.8", "0.024", "", "NTclustered", "gi|2893356045|emb|OZ220468.1|", "2910168", "g27433", "i0", "96.774", "0.116981132075472", "31", "1", "12", "0", "154", "184", "2204495", "2204525", "MAG: Longimicrobiales bacterium isolate ddfa3c06-a013-4680-9539-8883dc2ec397 genome assembly, chromosome: 1", "blastn", "31", "52.8", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Longimicrobiia", "Longimicrobiales", null, null, "Longimicrobiales bacterium"]], "truncated": false, "filtered_table_rows_count": 13, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "blastn", "p1": "PRJNA773247", "p2": "Gemmatimonadota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA773247&tax_phylum=Gemmatimonadota", "results": [{"value": "PRJNA773247", "label": "PRJNA773247", "count": 13, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&tax_phylum=Gemmatimonadota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA773247&tax_phylum=Gemmatimonadota", "results": [{"value": "blastn", "label": "blastn", "count": 13, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA773247&tax_phylum=Gemmatimonadota", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA773247&tax_phylum=Gemmatimonadota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 13, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA773247&tax_phylum=Gemmatimonadota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA773247&tax_phylum=Gemmatimonadota", "results": [{"value": "FCB group", "label": "FCB group", "count": 13, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA773247&tax_phylum=Gemmatimonadota&tax_clade=FCB+group", "selected": false}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA773247&tax_phylum=Gemmatimonadota", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 13, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA773247&tax_phylum=Gemmatimonadota&tax_kingdom=Pseudomonadati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA773247&tax_phylum=Gemmatimonadota", "results": [{"value": "Gemmatimonadota", "label": "Gemmatimonadota", "count": 13, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA773247", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 175.66557300006025}