{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"blastn\", bioproject = \"PRJNA716463\" and tax_phylum = \"Rhodophyta\"", "rows": [[707418, "PRJNA716463_P_NODE_122561_length_220_cov_4.714286_g122143_i0", "PRJNA716463", "122561", "220", "4.714286", "10.3714292", "Pyropia haitanensis", "1262161", "Rhodophyta", "other_Eukaryota", "407", "3.61e-109", "", "NTclustered", "gi|2745680298|gb|PP918987.1|", "1262161", "g122143", "i0", "100", "2", "220", "0", "100", "0", "1", "220", "22575", "22356", "Pyropia haitanensis isolate T2-4 female sex-linked region", "blastn", "440", "407", "1", "Eukaryota", null, null, "Rhodophyta", "Bangiophyceae", "Bangiales", "Bangiaceae", "Pyropia", "Pyropia haitanensis"], [708201, "PRJNA716463_P_NODE_5981_length_443_cov_10.962162_g5572_i0", "PRJNA716463", "5981", "443", "10.962162", "48.56237766", "Pyropia yezoensis", "2788", "Rhodophyta", "other_Eukaryota", "228", "6.629999999999999e-55", "", "NTclustered", "gi|2026667496|dbj|LC216214.1|", "2788", "g5572", "i0", "84.255", "0.530474040632054", "235", "35", "53", "2", "35", "269", "111", "343", "Pyropia yezoensis hipnB mRNA for hypothetical protein, complete cds", "blastn", "235", "228", "1", "Eukaryota", null, null, "Rhodophyta", "Bangiophyceae", "Bangiales", "Bangiaceae", "Pyropia", "Pyropia yezoensis"], [3259087, "PRJNA716463_P_NODE_30903_length_309_cov_2.449153_g30486_i0", "PRJNA716463", "30903", "309", "2.449153", "7.56788277", "Pyropia haitanensis", "1262161", "Rhodophyta", "other_Eukaryota", "479", "1.1199999999999996e-130", "", "NTclustered", "gi|1494245825|gb|MG765436.1|", "1262161", "g30486", "i0", "93.146", "11.4757281553398", "321", "10", "100", "1", "1", "309", "202", "522", "Pyropia haitanensis mitogen-activated protein kinase 13 mRNA, complete cds", "blastn", "3546", "479", "1", "Eukaryota", null, null, "Rhodophyta", "Bangiophyceae", "Bangiales", "Bangiaceae", "Pyropia", "Pyropia haitanensis"], [3259472, "PRJNA716463_P_NODE_56523_length_286_cov_2.023474_g56106_i0", "PRJNA716463", "56523", "286", "2.023474", "5.78713564", "Pyropia yezoensis", "2788", "Rhodophyta", "other_Eukaryota", "468", "2.21e-127", "", "NTclustered", "gi|30525877|gb|AY273820.1|", "2788", "g56106", "i0", "96.154", "74.5489510489511", "286", "11", "100", "0", "1", "286", "959", "1244", "Porphyra yezoensis cytosolic glyceraldehyde 3-phosphate dehydrogenase (GAPC) mRNA, complete cds", "blastn", "21321", "468", "1", "Eukaryota", null, null, "Rhodophyta", "Bangiophyceae", "Bangiales", "Bangiaceae", "Pyropia", "Pyropia yezoensis"], [3260118, "PRJNA716463_P_NODE_96623_length_254_cov_2.674033_g96206_i0", "PRJNA716463", "96623", "254", "2.674033", "6.79204382", "Pyropia haitanensis", "1262161", "Rhodophyta", "other_Eukaryota", "470", "5.37e-128", "", "NTclustered", "gi|193792559|gb|EU807991.1|", "1262161", "g96206", "i0", "100", "3.73622047244094", "254", "0", "100", "0", "1", "254", "265", "12", "Porphyra haitanensis cytosolic ascorbate peroxidase (APX) mRNA, complete cds", "blastn", "949", "470", "1", "Eukaryota", null, null, "Rhodophyta", "Bangiophyceae", "Bangiales", "Bangiaceae", "Pyropia", "Pyropia haitanensis"], [7087443, "PRJNA716463_P_NODE_9186_length_382_cov_3.336570_g8772_i0", "PRJNA716463", "9186", "382", "3.33657", "12.7456974", "Pyropia haitanensis", "1262161", "Rhodophyta", "other_Eukaryota", "427", "5.18e-115", "", "NTclustered", "gi|693266814|gb|KM102541.1|", "1262161", "g8772", "i0", "99.573", "1.39267015706806", "234", "1", "100", "0", "149", "382", "761", "528", "Pyropia haitanensis heat shock protein 40 (HSP40) mRNA, complete cds", "blastn", "532", "427", "1", "Eukaryota", null, null, "Rhodophyta", "Bangiophyceae", "Bangiales", "Bangiaceae", "Pyropia", "Pyropia haitanensis"], [8361945, "PRJNA716463_P_NODE_8507_length_394_cov_1.249221_g8094_i0", "PRJNA716463", "8507", "394", "1.249221", "4.92193074", "Pyropia haitanensis", "1262161", "Rhodophyta", "other_Eukaryota", "385", "3.27e-102", "", "NTclustered", "gi|567767244|gb|KF715271.1|", "1262161", "g8094", "i0", "99.526", "4.60913705583756", "211", "1", "54", "0", "65", "275", "1469", "1679", "Pyropia haitanensis heat shock protein 70-5 (HSP70-5) mRNA, complete cds", "blastn", "1816", "385", "1", "Eukaryota", null, null, "Rhodophyta", "Bangiophyceae", "Bangiales", "Bangiaceae", "Pyropia", "Pyropia haitanensis"], [9637030, "PRJNA716463_P_NODE_80808_length_268_cov_1.558974_g80391_i0", "PRJNA716463", "80808", "268", "1.558974", "4.17805032", "Pyropia haitanensis", "1262161", "Rhodophyta", "other_Eukaryota", "473", "4.419999999999999e-129", "", "NTclustered", "gi|736075336|gb|KM655307.1|", "1262161", "g80391", "i0", "99.614", "0.966417910447761", "259", "1", "97", "0", "10", "268", "1293", "1035", "Pyropia haitanensis TR mRNA, complete cds", "blastn", "259", "473", "1", "Eukaryota", null, null, "Rhodophyta", "Bangiophyceae", "Bangiales", "Bangiaceae", "Pyropia", "Pyropia haitanensis"], [10911569, "PRJNA716463_P_NODE_13429_length_328_cov_4.929412_g13013_i0", "PRJNA716463", "13429", "328", "4.929412", "16.16847136", "Pyropia haitanensis", "1262161", "Rhodophyta", "other_Eukaryota", "606", "5.249999999999998e-169", "", "NTclustered", "gi|402483698|gb|JX188386.1|", "1262161", "g13013", "i0", "100", "1", "328", "0", "100", "0", "1", "328", "2256", "2583", "Porphyra haitanensis lipoxygenase (lox) mRNA, complete cds", "blastn", "328", "606", "1", "Eukaryota", null, null, "Rhodophyta", "Bangiophyceae", "Bangiales", "Bangiaceae", "Pyropia", "Pyropia haitanensis"], [13460977, "PRJNA716463_P_NODE_114871_length_237_cov_2.481707_g114453_i0", "PRJNA716463", "114871", "237", "2.481707", "5.88164559", "Pyropia yezoensis", "2788", "Rhodophyta", "other_Eukaryota", "318", "1.8999999999999998e-82", "", "NTclustered", "gi|528746196|gb|KC904979.1|", "2788", "g114453", "i0", "91.139", "1", "237", "18", "100", "2", "1", "237", "461", "228", "Pyropia yezoensis S-phase kinase-associated protein 1 (SKP1) mRNA, complete cds", "blastn", "237", "318", "1", "Eukaryota", null, null, "Rhodophyta", "Bangiophyceae", "Bangiales", "Bangiaceae", "Pyropia", "Pyropia yezoensis"], [16011186, "PRJNA716463_P_NODE_85013_length_264_cov_3.445026_g84596_i0", "PRJNA716463", "85013", "264", "3.445026", "9.09486864", "Pyropia haitanensis", "1262161", "Rhodophyta", "other_Eukaryota", "60.2", "1.44e-4", "", "NTclustered", "gi|1067908609|gb|KU726060.1|", "1262161", "g84596", "i0", "97.222", "1.06439393939394", "36", "0", "13", "1", "52", "86", "638", "603", "Pyropia haitanensis large subunit ribosomal RNA gene, partial sequence", "blastn", "281", "60.2", "1", "Eukaryota", null, null, "Rhodophyta", "Bangiophyceae", "Bangiales", "Bangiaceae", "Pyropia", "Pyropia haitanensis"], [17286445, "PRJNA716463_P_NODE_71594_length_275_cov_1.955446_g71177_i0", "PRJNA716463", "71594", "275", "1.955446", "5.3774765", "Pyropia haitanensis", "1262161", "Rhodophyta", "other_Eukaryota", "486", "5.8499999999999985e-133", "", "NTclustered", "gi|2745680298|gb|PP918987.1|", "1262161", "g71177", "i0", "98.545", "2", "275", "4", "100", "0", "1", "275", "102054", "102328", "Pyropia haitanensis isolate T2-4 female sex-linked region", "blastn", "550", "486", "1", "Eukaryota", null, null, "Rhodophyta", "Bangiophyceae", "Bangiales", "Bangiaceae", "Pyropia", "Pyropia haitanensis"], [21111362, "PRJNA716463_P_NODE_94017_length_257_cov_1.277174_g93600_i0", "PRJNA716463", "94017", "257", "1.277174", "3.28233718", "Pyropia haitanensis", "1262161", "Rhodophyta", "other_Eukaryota", "470", "5.45e-128", "", "NTclustered", "gi|736075312|gb|KM655303.1|", "1262161", "g93600", "i0", "99.611", "1", "257", "1", "100", "0", "1", "257", "68", "324", "Pyropia haitanensis CAT mRNA, complete cds", "blastn", "257", "470", "1", "Eukaryota", null, null, "Rhodophyta", "Bangiophyceae", "Bangiales", "Bangiaceae", "Pyropia", "Pyropia haitanensis"], [22384782, "PRJNA716463_P_NODE_114318_length_238_cov_2.175758_g113900_i0", "PRJNA716463", "114318", "238", "2.175758", "5.17830404", "Pyropia yezoensis", "2788", "Rhodophyta", "other_Eukaryota", "143", "1.2299999999999998e-29", "", "NTclustered", "gi|223588265|dbj|AB480828.1|", "2788", "g113900", "i0", "90.654", "0.449579831932773", "107", "10", "45", "0", "36", "142", "533", "427", "Porphyra yezoensis PyMBF1 mRNA for multiprotein bridging factor 1, complete cds", "blastn", "107", "143", "1", "Eukaryota", null, null, "Rhodophyta", "Bangiophyceae", "Bangiales", "Bangiaceae", "Pyropia", "Pyropia yezoensis"], [23661610, "PRJNA716463_P_NODE_82199_length_267_cov_1.231959_g81782_i0", "PRJNA716463", "82199", "267", "1.231959", "3.28933053", "Pyropia yezoensis", "2788", "Rhodophyta", "other_Eukaryota", "361", "3.57e-95", "", "NTclustered", "gi|2236026315|gb|MW410947.1|", "388772", "g81782", "i0", "91.011", "1.9812734082397", "267", "24", "100", "0", "1", "267", "1749", "2015", "Pyropia yezoensis f. yezoensis nitrate reductase (NR) gene, partial cds", "blastn", "529", "361", "1", "Eukaryota", null, null, "Rhodophyta", "Bangiophyceae", "Bangiales", "Bangiaceae", "Pyropia", "Pyropia yezoensis"], [24933895, "PRJNA716463_P_NODE_115980_length_235_cov_3.000000_g115562_i0", "PRJNA716463", "115980", "235", "3", "7.05", "Pyropia haitanensis", "1262161", "Rhodophyta", "other_Eukaryota", "422", "1.39e-113", "", "NTclustered", "gi|567767244|gb|KF715271.1|", "1262161", "g115562", "i0", "99.145", "1.99574468085106", "234", "2", "99", "0", "1", "234", "2002", "2235", "Pyropia haitanensis heat shock protein 70-5 (HSP70-5) mRNA, complete cds", "blastn", "469", "422", "1", "Eukaryota", null, null, "Rhodophyta", "Bangiophyceae", "Bangiales", "Bangiaceae", "Pyropia", "Pyropia haitanensis"]], "truncated": false, "filtered_table_rows_count": 16, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "blastn", "p1": "PRJNA716463", "p2": "Rhodophyta"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA716463&tax_phylum=Rhodophyta", "results": [{"value": "PRJNA716463", "label": "PRJNA716463", "count": 16, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&tax_phylum=Rhodophyta", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA716463&tax_phylum=Rhodophyta", "results": [{"value": "blastn", "label": "blastn", "count": 16, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA716463&tax_phylum=Rhodophyta", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA716463&tax_phylum=Rhodophyta", "results": [{"value": "Eukaryota", "label": "Eukaryota", "count": 16, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA716463&tax_phylum=Rhodophyta&tax_superkingdom=Eukaryota", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA716463&tax_phylum=Rhodophyta", "results": [], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA716463&tax_phylum=Rhodophyta", "results": [], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA716463&tax_phylum=Rhodophyta", "results": [{"value": "Rhodophyta", "label": "Rhodophyta", "count": 16, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA716463", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 304.94266399909975}