{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"blastn\", bioproject = \"PRJNA695273\" and tax_phylum = \"Spirochaetota\"", "rows": [[1182092, "PRJNA695273_P_NODE_136521_length_248_cov_0.880000_g135763_i0", "PRJNA695273", "136521", "248", "0.88", "2.1824", "root", "1", "Root_unresolved", "Root_unresolved", "387", "5.409999999999998e-103", "", "NTclustered", "gi|2265113193|gb|CP051148.1|", "69710", "g135763", "i0", "95.102", "5.92741935483871", "245", "12", "99", "0", "2", "246", "990099", "989855", "Treponema vincentii strain OMZ 861 chromosome, complete genome", "blastn", "1470", "387", "1", "Bacteria", null, "Pseudomonadati", "Spirochaetota", "Spirochaetia", "Spirochaetales", "Treponemataceae", "Treponema", "Treponema vincentii"], [2457476, "PRJNA695273_P_NODE_153202_length_243_cov_0.905882_g152444_i0", "PRJNA695273", "153202", "243", "0.905882", "2.20129326", "Treponema", "157", "Bacteria", "Bacteria", "337", "5.399999999999998e-88", "", "NTclustered", "gi|2034589463|gb|CP050497.1|", "69710", "g152444", "i0", "91.736", "9.95884773662551", "242", "20", "99", "0", "2", "243", "2532902", "2532661", "Treponema vincentii strain OMZ 806 chromosome, complete genome", "blastn", "2420", "337", "1", "Bacteria", null, "Pseudomonadati", "Spirochaetota", "Spirochaetia", "Spirochaetales", "Treponemataceae", "Treponema", "Treponema vincentii"], [10110921, "PRJNA695273_P_NODE_151748_length_243_cov_1.476471_g150990_i0", "PRJNA695273", "151748", "243", "1.476471", "3.58782453", "Leptospira", "171", "Bacteria", "Bacteria", "60.2", "1.31e-4", "", "NTclustered", "gi|167774246|gb|CP000777.1|", "355278", "g150990", "i0", "100", "0.263374485596708", "32", "0", "13", "0", "133", "164", "3289532", "3289563", "Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)' chromosome I, complete sequence", "blastn", "64", "60.2", "1", "Bacteria", null, "Pseudomonadati", "Spirochaetota", "Spirochaetia", "Leptospirales", "Leptospiraceae", "Leptospira", "Leptospira biflexa"], [11385667, "PRJNA695273_P_NODE_140729_length_247_cov_0.885057_g139971_i0", "PRJNA695273", "140729", "247", "0.885057", "2.18609079", "Treponema", "157", "Bacteria", "Bacteria", "446", "8.759999999999998e-121", "", "NTclustered", "gi|2265168914|gb|CP051304.1|", "158", "g139971", "i0", "99.19", "20.7894736842105", "247", "2", "100", "0", "1", "247", "1114812", "1114566", "Treponema denticola strain CD-1 chromosome, complete genome", "blastn", "5135", "446", "1", "Bacteria", null, "Pseudomonadati", "Spirochaetota", "Spirochaetia", "Spirochaetales", "Treponemataceae", "Treponema", "Treponema denticola"], [13430600, "PRJNA695273_P_NODE_127471_length_251_cov_0.865169_g126713_i0", "PRJNA695273", "127471", "251", "0.865169", "2.17157419", "Treponema denticola", "158", "Bacteria", "Bacteria", "453", "5.34e-123", "", "NTclustered", "gi|2265172126|gb|CP051522.1|", "158", "g126713", "i0", "99.203", "193.382470119522", "251", "2", "100", "0", "1", "251", "514267", "514017", "Treponema denticola strain OMZ 910 chromosome, complete genome", "blastn", "48539", "453", "1", "Bacteria", null, "Pseudomonadati", "Spirochaetota", "Spirochaetia", "Spirochaetales", "Treponemataceae", "Treponema", "Treponema denticola"], [19803404, "PRJNA695273_P_NODE_115596_length_262_cov_1.328042_g114838_i0", "PRJNA695273", "115596", "262", "1.328042", "3.47947004", "Treponema socranskii", "53419", "Bacteria", "Bacteria", "484", "1.99e-132", "", "NTclustered", "gi|1868715119|emb|LR796240.1|", "69713", "g114838", "i0", "100", "3", "262", "0", "100", "0", "1", "262", "820836", "820575", "Treponema socranskii subsp. buccale strain Marseille-CSURQ0203 genome assembly, chromosome: contig00001", "blastn", "786", "484", "1", "Bacteria", null, "Pseudomonadati", "Spirochaetota", "Spirochaetia", "Spirochaetales", "Treponemataceae", "Treponema", "Treponema socranskii"], [24903469, "PRJNA695273_P_NODE_144200_length_246_cov_0.890173_g143442_i0", "PRJNA695273", "144200", "246", "0.890173", "2.18982558", "Treponema denticola", "158", "Bacteria", "Bacteria", "449", "6.74e-122", "", "NTclustered", "gi|2265168914|gb|CP051304.1|", "158", "g143442", "i0", "99.593", "28.4024390243902", "246", "1", "100", "0", "1", "246", "1823739", "1823984", "Treponema denticola strain CD-1 chromosome, complete genome", "blastn", "6987", "449", "1", "Bacteria", null, "Pseudomonadati", "Spirochaetota", "Spirochaetia", "Spirochaetales", "Treponemataceae", "Treponema", "Treponema denticola"]], "truncated": false, "filtered_table_rows_count": 7, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "blastn", "p1": "PRJNA695273", "p2": "Spirochaetota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA695273&tax_phylum=Spirochaetota", "results": [{"value": "PRJNA695273", "label": "PRJNA695273", "count": 7, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&tax_phylum=Spirochaetota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA695273&tax_phylum=Spirochaetota", "results": [{"value": "blastn", "label": "blastn", "count": 7, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA695273&tax_phylum=Spirochaetota", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA695273&tax_phylum=Spirochaetota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 7, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA695273&tax_phylum=Spirochaetota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA695273&tax_phylum=Spirochaetota", "results": [], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA695273&tax_phylum=Spirochaetota", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 7, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA695273&tax_phylum=Spirochaetota&tax_kingdom=Pseudomonadati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA695273&tax_phylum=Spirochaetota", "results": [{"value": "Spirochaetota", "label": "Spirochaetota", "count": 7, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA695273", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 153.28964201034978}