{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"blastn\", bioproject = \"PRJNA681822\" and tax_phylum = \"Campylobacterota\"", "rows": [[656149, "PRJNA681822_P_NODE_479181_length_241_cov_0.916667_g477691_i0", "PRJNA681822", "479181", "241", "0.916667", "2.20916747", "Campylobacter concisus", "199", "Bacteria", "Bacteria", "424", "3.99e-114", "", "NTclustered", "gi|1376251231|gb|CP021642.1|", "199", "g477691", "i0", "98.34", "17.9377593360996", "241", "4", "100", "0", "1", "241", "556465", "556705", "Campylobacter concisus strain P2CDO4 chromosome, complete genome", "blastn", "4323", "424", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Campylobacteraceae", "Campylobacter", "Campylobacter concisus"], [1930595, "PRJNA681822_P_NODE_340522_length_263_cov_1.610526_g339033_i0", "PRJNA681822", "340522", "263", "1.610526", "4.23568338", "Nitratiruptor sp. YY09-18", "2724901", "Bacteria", "Bacteria", "78.7", "3.96e-10", "", "NTclustered", "gi|1941658040|dbj|AP023065.1|", "2724901", "g339033", "i0", "87.879", "0.250950570342205", "66", "8", "25", "0", "5", "70", "769971", "769906", "Nitratiruptor sp. YY09-18 DNA, complete genome", "blastn", "66", "78.7", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Nautiliales", "Nitratiruptoraceae", "Nitratiruptor", "Nitratiruptor sp. YY09-18"], [3205507, "PRJNA681822_P_NODE_351663_length_260_cov_1.411765_g350174_i0", "PRJNA681822", "351663", "260", "1.411765", "3.670589", "Campylobacter concisus", "199", "Bacteria", "Bacteria", "451", "1.9999999999999998e-122", "", "NTclustered", "gi|1938715890|gb|CP049263.1|", "199", "g350174", "i0", "98.077", "12.3192307692308", "260", "3", "100", "1", "1", "260", "748378", "748121", "Campylobacter concisus strain H16O-S1 chromosome, complete genome", "blastn", "3203", "451", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Campylobacteraceae", "Campylobacter", "Campylobacter concisus"], [5759025, "PRJNA681822_P_NODE_410465_length_248_cov_1.668571_g408976_i0", "PRJNA681822", "410465", "248", "1.668571", "4.13805608", "Campylobacter concisus", "199", "Bacteria", "Bacteria", "459", "1.13e-124", "", "NTclustered", "gi|1938715890|gb|CP049263.1|", "199", "g408976", "i0", "100", "5", "248", "0", "100", "0", "1", "248", "91683", "91436", "Campylobacter concisus strain H16O-S1 chromosome, complete genome", "blastn", "1240", "459", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Campylobacteraceae", "Campylobacter", "Campylobacter concisus"], [5759191, "PRJNA681822_P_NODE_423005_length_247_cov_0.885057_g421516_i0", "PRJNA681822", "423005", "247", "0.885057", "2.18609079", "Campylobacter concisus", "199", "Bacteria", "Bacteria", "451", "1.88e-122", "", "NTclustered", "gi|1938730527|gb|CP049274.1|", "199", "g421516", "i0", "99.595", "22.7570850202429", "247", "1", "100", "0", "1", "247", "483741", "483987", "Campylobacter concisus strain P10CDO-S2 chromosome, complete genome", "blastn", "5621", "451", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Campylobacteraceae", "Campylobacter", "Campylobacter concisus"], [8309358, "PRJNA681822_P_NODE_469807_length_242_cov_0.911243_g468317_i0", "PRJNA681822", "469807", "242", "0.911243", "2.20520806", "Aliarcobacter lanthieri", "1355374", "Bacteria", "Bacteria", "52.8", "0.022", "", "NTclustered", "gi|2922053193|gb|CP182894.1|", "1355374", "g468317", "i0", "100", "0.231404958677686", "28", "0", "12", "0", "193", "220", "651913", "651886", "Aliarcobacter lanthieri strain BNI-4366 chromosome, complete genome", "blastn", "56", "52.8", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Arcobacteraceae", "Aliarcobacter", "Aliarcobacter lanthieri"], [10099614, "PRJNA681822_P_NODE_452628_length_244_cov_0.900585_g451138_i0", "PRJNA681822", "452628", "244", "0.900585", "2.1974274", "Campylobacter", "194", "Bacteria", "Bacteria", "435", "1.87e-117", "", "NTclustered", "gi|1935893765|gb|CP049234.1|", "199", "g451138", "i0", "98.77", "17.8729508196721", "244", "3", "100", "0", "1", "244", "704329", "704086", "Campylobacter concisus strain P15UCO-S2 chromosome, complete genome", "blastn", "4361", "435", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Campylobacteraceae", "Campylobacter", "Campylobacter concisus"], [12135639, "PRJNA681822_P_NODE_474050_length_242_cov_0.911243_g472560_i0", "PRJNA681822", "474050", "242", "0.911243", "2.20520806", "Campylobacter showae", "204", "Bacteria", "Bacteria", "355", "1.48e-93", "", "NTclustered", "gi|1483583494|emb|LT631418.1|", "204", "g472560", "i0", "94.017", "5.80165289256198", "234", "14", "97", "0", "1", "234", "36405", "36172", "Campylobacter showae genome assembly, chromosome: I", "blastn", "1404", "355", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Campylobacteraceae", "Campylobacter", "Campylobacter showae"], [13407957, "PRJNA681822_P_NODE_296371_length_275_cov_1.460396_g294882_i0", "PRJNA681822", "296371", "275", "1.460396", "4.016089", "Campylobacter concisus", "199", "Bacteria", "Bacteria", "497", "2.7e-136", "", "NTclustered", "gi|1063302220|gb|CP000792.2|", "360104", "g294882", "i0", "99.273", "15.6181818181818", "275", "2", "100", "0", "1", "275", "802185", "802459", "Campylobacter concisus 13826 chromosome, complete genome", "blastn", "4295", "497", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Campylobacteraceae", "Campylobacter", "Campylobacter concisus"], [13408874, "PRJNA681822_P_NODE_373911_length_253_cov_1.711111_g372422_i0", "PRJNA681822", "373911", "253", "1.711111", "4.32911083", "Campylobacter rectus", "203", "Bacteria", "Bacteria", "440", "4.189999999999998e-119", "", "NTclustered", "gi|1622745323|gb|CP012543.1|", "203", "g372422", "i0", "98.024", "13.2213438735178", "253", "5", "100", "0", "1", "253", "976812", "976560", "Campylobacter rectus strain ATCC 33238, complete genome", "blastn", "3345", "440", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Campylobacteraceae", "Campylobacter", "Campylobacter rectus"], [14682552, "PRJNA681822_P_NODE_247412_length_287_cov_1.425234_g245923_i0", "PRJNA681822", "247412", "287", "1.425234", "4.09042158", "Helicobacter pylori", "210", "Bacteria", "Bacteria", "231", "3.1799999999999997e-56", "", "NTclustered", "gi|2814758776|gb|PQ423797.1|", "210", "g245923", "i0", "90.805", "72.1881533101045", "174", "15", "60", "1", "111", "283", "18177", "18004", "Helicobacter pylori strain TER81 plasmid pTER81, complete sequence", "blastn", "20718", "231", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [19780370, "PRJNA681822_P_NODE_251916_length_286_cov_1.366197_g250427_i0", "PRJNA681822", "251916", "286", "1.366197", "3.90732342", "Campylobacter concisus", "199", "Bacteria", "Bacteria", "473", "4.7599999999999997e-129", "", "NTclustered", "gi|1935895612|gb|CP049232.1|", "199", "g250427", "i0", "96.503", "11.979020979021", "286", "10", "100", "0", "1", "286", "194587", "194872", "Campylobacter concisus strain H9O-S2 chromosome, complete genome", "blastn", "3426", "473", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Campylobacteraceae", "Campylobacter", "Campylobacter concisus"], [22331498, "PRJNA681822_P_NODE_301758_length_274_cov_1.039801_g300269_i0", "PRJNA681822", "301758", "274", "1.039801", "2.84905474", "Campylobacter concisus", "199", "Bacteria", "Bacteria", "424", "4.63e-114", "", "NTclustered", "gi|1938715890|gb|CP049263.1|", "199", "g300269", "i0", "94.526", "17.956204379562", "274", "15", "100", "0", "1", "274", "1512881", "1512608", "Campylobacter concisus strain H16O-S1 chromosome, complete genome", "blastn", "4920", "424", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Campylobacteraceae", "Campylobacter", "Campylobacter concisus"], [22332027, "PRJNA681822_P_NODE_348458_length_261_cov_1.313830_g346969_i0", "PRJNA681822", "348458", "261", "1.31383", "3.4290963", "Aliarcobacter cryaerophilus", "28198", "Bacteria", "Bacteria", "444", "3.36e-120", "", "NTclustered", "gi|2620255116|gb|CP129949.1|", "2933791", "g346969", "i0", "97.318", "29.0229885057471", "261", "7", "100", "0", "1", "261", "216887", "217147", "Arcobacter cryaerophilus gv. pseudocryaerophilus strain DSM 115956 chromosome, complete genome", "blastn", "7575", "444", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Arcobacteraceae", "Aliarcobacter", "Aliarcobacter cryaerophilus"], [24881778, "PRJNA681822_P_NODE_424860_length_247_cov_0.885057_g423371_i0", "PRJNA681822", "424860", "247", "0.885057", "2.18609079", "Campylobacter concisus", "199", "Bacteria", "Bacteria", "329", "9.21e-86", "", "NTclustered", "gi|1938728373|gb|CP049272.1|", "199", "g423371", "i0", "90.688", "10.080971659919", "247", "23", "100", "0", "1", "247", "1505159", "1504913", "Campylobacter concisus strain P27CDO-S2 chromosome, complete genome", "blastn", "2490", "329", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Campylobacteraceae", "Campylobacter", "Campylobacter concisus"]], "truncated": false, "filtered_table_rows_count": 15, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "blastn", "p1": "PRJNA681822", "p2": "Campylobacterota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA681822&tax_phylum=Campylobacterota", "results": [{"value": "PRJNA681822", "label": "PRJNA681822", "count": 15, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&tax_phylum=Campylobacterota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA681822&tax_phylum=Campylobacterota", "results": [{"value": "blastn", "label": "blastn", "count": 15, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA681822&tax_phylum=Campylobacterota", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA681822&tax_phylum=Campylobacterota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 15, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA681822&tax_phylum=Campylobacterota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA681822&tax_phylum=Campylobacterota", "results": [], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA681822&tax_phylum=Campylobacterota", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 15, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA681822&tax_phylum=Campylobacterota&tax_kingdom=Pseudomonadati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA681822&tax_phylum=Campylobacterota", "results": [{"value": "Campylobacterota", "label": "Campylobacterota", "count": 15, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA681822", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 292.89847702602856}