{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"blastn\", bioproject = \"PRJNA674308\" and tax_clade = \"core chlorophytes\"", "rows": [[644656, "PRJNA674308_P_NODE_3101_length_553_cov_1.525794_g2870_i0", "PRJNA674308", "3101", "553", "1.525794", "8.43764082", "Chlamydomonas reinhardtii", "3055", "Plants", "Plants", "62.1", "9.04e-5", "", "NTclustered", "gi|2082252565|ref|XM_043065027.1|", "3055", "g2870", "i0", "100", "0.547920433996383", "33", "0", "6", "0", "223", "255", "1472", "1504", "Chlamydomonas reinhardtii uncharacterized protein (CHLRE_08g370700v5), mRNA", "blastn", "303", "62.1", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Chlamydomonadales", "Chlamydomonadaceae", "Chlamydomonas", "Chlamydomonas reinhardtii"], [1166776, "PRJNA674308_P_NODE_5201_length_416_cov_24.673025_g4966_i0", "PRJNA674308", "5201", "416", "24.673025", "102.639784", "Chlamydomonas", "3052", "Plants", "Plants", "760", "0", "", "NTclustered", "gi|2082265827|ref|XM_043070485.1|", "3055", "g4966", "i0", "100", "98.9783653846154", "411", "0", "99", "0", "1", "411", "1901", "2311", "Chlamydomonas reinhardtii uncharacterized protein (CHLRE_14g634365v5), mRNA", "blastn", "41175", "760", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Chlamydomonadales", "Chlamydomonadaceae", "Chlamydomonas", "Chlamydomonas reinhardtii"], [1920689, "PRJNA674308_P_NODE_13182_length_264_cov_9.837209_g12947_i0", "PRJNA674308", "13182", "264", "9.837209", "25.97023176", "Chlamydomonas reinhardtii", "3055", "Plants", "Plants", "483", "7.219999999999998e-132", "", "NTclustered", "gi|1212783794|gb|MF083691.1|", "3055", "g12947", "i0", "100", "131.007575757576", "261", "0", "100", "0", "4", "264", "39898", "39638", "Chlamydomonas reinhardtii strain CC-1051 M18 (ac9) mt+ chloroplast, complete genome", "blastn", "34586", "483", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Chlamydomonadales", "Chlamydomonadaceae", "Chlamydomonas", "Chlamydomonas reinhardtii"], [1920775, "PRJNA674308_P_NODE_21742_length_212_cov_2.263804_g21507_i0", "PRJNA674308", "21742", "212", "2.263804", "4.79926448", "Chlamydomonas reinhardtii", "3055", "Plants", "Plants", "392", "9.67e-105", "", "NTclustered", "gi|162009877|gb|EU306617.1|", "3055", "g21507", "i0", "100", "29.4622641509434", "212", "0", "100", "0", "1", "212", "11058", "10847", "Chlamydomonas reinhardtii strain CC-1373 mt+ mitochondrion, complete genome", "blastn", "6246", "392", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Chlamydomonadales", "Chlamydomonadaceae", "Chlamydomonas", "Chlamydomonas reinhardtii"], [2441831, "PRJNA674308_P_NODE_20502_length_217_cov_9.107143_g20267_i0", "PRJNA674308", "20502", "217", "9.107143", "19.76250031", "Chlamydomonadales", "3042", "Plants", "Plants", "401", "1.6499999999999994e-107", "", "NTclustered", "gi|430007894|gb|JX888471.1|", "3055", "g20267", "i0", "100", "99.9677419354839", "217", "0", "100", "0", "1", "217", "70", "286", "Chlamydomonas reinhardtii strain CC-620 18S ribosomal RNA gene, partial sequence", "blastn", "21693", "401", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Chlamydomonadales", "Chlamydomonadaceae", "Chlamydomonas", "Chlamydomonas reinhardtii"], [6270471, "PRJNA674308_P_NODE_26845_length_193_cov_3.736111_g26610_i0", "PRJNA674308", "26845", "193", "3.736111", "7.21069423", "Chlamydomonas", "3052", "Plants", "Plants", "357", "3.1499999999999996e-94", "", "NTclustered", "gi|167047969|gb|EU410621.1|", "3055", "g26610", "i0", "100", "101.40932642487", "193", "0", "100", "0", "1", "193", "2379", "2571", "Chlamydomonas reinhardtii 26S ribosomal RNA gene, partial sequence", "blastn", "19572", "357", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Chlamydomonadales", "Chlamydomonadaceae", "Chlamydomonas", "Chlamydomonas reinhardtii"], [8819496, "PRJNA674308_P_NODE_14327_length_254_cov_58.921951_g14092_i0", "PRJNA674308", "14327", "254", "58.921951", "149.66175554", "Chlamydomonas", "3052", "Plants", "Plants", "459", "1.1599999999999999e-124", "", "NTclustered", "gi|167047969|gb|EU410621.1|", "3055", "g14092", "i0", "99.213", "100.905511811024", "254", "2", "100", "0", "1", "254", "2097", "1844", "Chlamydomonas reinhardtii 26S ribosomal RNA gene, partial sequence", "blastn", "25630", "459", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Chlamydomonadales", "Chlamydomonadaceae", "Chlamydomonas", "Chlamydomonas reinhardtii"], [10849002, "PRJNA674308_P_NODE_989_length_1006_cov_13.923720_g842_i0", "PRJNA674308", "989", "1006", "13.92372", "140.0726232", "Chlamydomonas reinhardtii", "3055", "Plants", "Plants", "1506", "0", "", "NTclustered", "gi|1212783794|gb|MF083691.1|", "3055", "g842", "i0", "93.688", "127.760437375746", "1014", "51", "99", "10", "1", "1005", "39796", "40805", "Chlamydomonas reinhardtii strain CC-1051 M18 (ac9) mt+ chloroplast, complete genome", "blastn", "128527", "1506", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Chlamydomonadales", "Chlamydomonadaceae", "Chlamydomonas", "Chlamydomonas reinhardtii"], [12124112, "PRJNA674308_P_NODE_39790_length_167_cov_294.669492_g39555_i0", "PRJNA674308", "39790", "167", "294.669492", "492.09805164", "Chlamydomonas sp. TK-1983", "3056", "Plants", "Plants", "195", "2.2e-45", "", "NTclustered", "gi|174203|gb|K02345.1|CRERRA", "3056", "g39555", "i0", "100", "1", "105", "0", "100", "0", "1", "105", "105", "1", "Chlamydomonas sp. TK-1983 5S ribosomal RNA gene, complete sequence", "blastn", "167", "195", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Chlamydomonadales", "Chlamydomonadaceae", "Chlamydomonas", "Chlamydomonas sp. TK-1983"], [13398855, "PRJNA674308_P_NODE_37771_length_168_cov_1.747899_g37536_i0", "PRJNA674308", "37771", "168", "1.747899", "2.93647032", "Chlamydomonas reinhardtii", "3055", "Plants", "Plants", "311", "2.11e-80", "", "NTclustered", "gi|2082260566|ref|XM_043068286.1|", "3055", "g37536", "i0", "100", "1", "168", "0", "100", "0", "1", "168", "4478", "4645", "Chlamydomonas reinhardtii uncharacterized protein (CHLRE_12g515000v5), mRNA", "blastn", "168", "311", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Chlamydomonadales", "Chlamydomonadaceae", "Chlamydomonas", "Chlamydomonas reinhardtii"], [15947553, "PRJNA674308_P_NODE_48613_length_164_cov_0.904348_g48378_i0", "PRJNA674308", "48613", "164", "0.904348", "1.48313072", "Nannochloris normandinae", "926285", "Plants", "Plants", "292", "7.41e-75", "", "NTclustered", "gi|922575245|gb|JQ921007.1|", "926285", "g48378", "i0", "98.788", "129.481707317073", "165", "1", "100", "1", "1", "164", "317", "481", "Nannochloris normandinae strain SAG 9.82 23S large subunit ribosomal RNA gene, partial sequence; chloroplast", "blastn", "21235", "292", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Trebouxiophyceae", "Chlorellales", "Chlorellaceae", "Nannochloris", "Nannochloris normandinae"], [16469470, "PRJNA674308_P_NODE_3473_length_517_cov_29.920940_g3240_i0", "PRJNA674308", "3473", "517", "29.92094", "154.6912598", "Chlamydomonadales", "3042", "Plants", "Plants", "955", "0", "", "NTclustered", "gi|1212783794|gb|MF083691.1|", "3055", "g3240", "i0", "100", "149.025145067698", "517", "0", "100", "0", "1", "517", "42078", "41562", "Chlamydomonas reinhardtii strain CC-1051 M18 (ac9) mt+ chloroplast, complete genome", "blastn", "77046", "955", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Chlamydomonadales", "Chlamydomonadaceae", "Chlamydomonas", "Chlamydomonas reinhardtii"], [18497318, "PRJNA674308_P_NODE_7895_length_338_cov_20.000000_g7660_i0", "PRJNA674308", "7895", "338", "20", "67.6", "Chlamydomonas reinhardtii", "3055", "Plants", "Plants", "623", "5.389999999999999e-174", "", "NTclustered", "gi|167047969|gb|EU410621.1|", "3055", "g7660", "i0", "100", "69.3698224852071", "337", "0", "99", "0", "1", "337", "2966", "3302", "Chlamydomonas reinhardtii 26S ribosomal RNA gene, partial sequence", "blastn", "23447", "623", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Chlamydomonadales", "Chlamydomonadaceae", "Chlamydomonas", "Chlamydomonas reinhardtii"], [19771859, "PRJNA674308_P_NODE_8996_length_317_cov_2.679104_g8761_i0", "PRJNA674308", "8996", "317", "2.679104", "8.49275968", "Volvox carteri", "3067", "Plants", "Plants", "180", "1.31e-40", "", "NTclustered", "gi|302850550|ref|XM_002956756.1|", "3068", "g8761", "i0", "88.514", "45.397476340694", "148", "17", "47", "0", "170", "317", "312", "165", "Volvox carteri f. nagariensis histone H4 (hstH4-4), partial mRNA", "blastn", "14391", "180", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Chlamydomonadales", "Volvocaceae", "Volvox", "Volvox carteri"], [20292825, "PRJNA674308_P_NODE_11016_length_288_cov_1.640167_g10781_i0", "PRJNA674308", "11016", "288", "1.640167", "4.72368096", "Prototheca", "3110", "Plants", "Plants", "196", "1.16e-45", "", "NTclustered", "gi|1381389463|ref|NC_037449.1|", "1973153", "g10781", "i0", "80.545", "8.09722222222222", "257", "48", "89", "2", "33", "288", "27983", "28238", "Prototheca zopfii strain SAG 2063 mitochondrion, complete genome", "blastn", "2332", "196", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Trebouxiophyceae", "Chlorellales", "Chlorellaceae", "Prototheca", "Prototheca ciferrii"], [21047081, "PRJNA674308_P_NODE_10197_length_298_cov_18.606426_g9962_i0", "PRJNA674308", "10197", "298", "18.606426", "55.44714948", "Chlamydomonas reinhardtii", "3055", "Plants", "Plants", "551", "2.239999999999999e-152", "", "NTclustered", "gi|422779560|gb|JX839535.1|", "3055", "g9962", "i0", "100", "94.6342281879195", "298", "0", "100", "0", "1", "298", "587", "290", "Chlamydomonas reinhardtii strain CC-621 28S ribosomal RNA gene, partial sequence", "blastn", "28201", "551", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Chlamydomonadales", "Chlamydomonadaceae", "Chlamydomonas", "Chlamydomonas reinhardtii"], [24118475, "PRJNA674308_P_NODE_27119_length_193_cov_1.083333_g26884_i0", "PRJNA674308", "27119", "193", "1.083333", "2.09083269", "Marvania", "97104", "Plants", "Plants", "178", "2.63e-40", "", "NTclustered", "gi|2724824493|gb|PP746561.1|", "97105", "g26884", "i0", "83.42", "64.8549222797927", "193", "30", "99", "2", "2", "193", "28871", "28680", "Marvania geminata culture SAG:12.88 mitochondrion, complete genome", "blastn", "12517", "178", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Trebouxiophyceae", "Chlorellales", "Chlorellaceae", "Marvania", "Marvania geminata"], [24118534, "PRJNA674308_P_NODE_34759_length_171_cov_13.467213_g34524_i0", "PRJNA674308", "34759", "171", "13.467213", "23.02893423", "Chlamydomonas", "3052", "Plants", "Plants", "316", "4.6e-82", "", "NTclustered", "gi|1233083424|gb|MF678012.1|", "3055", "g34524", "i0", "100", "96.6959064327485", "171", "0", "100", "0", "1", "171", "2160", "1990", "Chlamydomonas reinhardtii strain CCAP 11/32B small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1 and 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence", "blastn", "16535", "316", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Chlamydomonadales", "Chlamydomonadaceae", "Chlamydomonas", "Chlamydomonas reinhardtii"]], "truncated": false, "filtered_table_rows_count": 18, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_clade\" = :p2 order by rowid limit 101", "params": {"p0": "blastn", "p1": "PRJNA674308", "p2": "core chlorophytes"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA674308&tax_clade=core+chlorophytes", "results": [{"value": "PRJNA674308", "label": "PRJNA674308", "count": 18, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&tax_clade=core+chlorophytes", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA674308&tax_clade=core+chlorophytes", "results": [{"value": "blastn", "label": "blastn", "count": 18, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA674308&tax_clade=core+chlorophytes", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA674308&tax_clade=core+chlorophytes", "results": [{"value": "Eukaryota", "label": "Eukaryota", "count": 18, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA674308&tax_clade=core+chlorophytes&tax_superkingdom=Eukaryota", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA674308&tax_clade=core+chlorophytes", "results": [{"value": "core chlorophytes", "label": "core chlorophytes", "count": 18, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA674308", "selected": true}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA674308&tax_clade=core+chlorophytes", "results": [{"value": "Viridiplantae", "label": "Viridiplantae", "count": 18, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA674308&tax_clade=core+chlorophytes&tax_kingdom=Viridiplantae", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA674308&tax_clade=core+chlorophytes", "results": [{"value": "Chlorophyta", "label": "Chlorophyta", "count": 18, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA674308&tax_clade=core+chlorophytes&tax_phylum=Chlorophyta", "selected": false}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 152.62482900288887}