{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"blastn\", bioproject = \"PRJNA666695\" and tax_phylum = \"Chlorophyta\"", "rows": [[630821, "PRJNA666695_S_NODE_141301_length_184_cov_1.286713_g140207_i0", "PRJNA666695", "141301", "184", "1.286713", "2.36755192", "Monoraphidium neglectum", "145388", "Plants", "Plants", "106", "1.19e-18", "", "NTclustered", "gi|926785511|ref|XM_014045776.1|", "145388", "g140207", "i0", "78.75", "1.3804347826087", "160", "33", "87", "1", "9", "168", "507", "349", "Monoraphidium neglectum 60S acidic ribosomal protein P0 mRNA", "blastn", "254", "106", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Sphaeropleales", "Selenastraceae", "Monoraphidium", "Monoraphidium neglectum"], [1907643, "PRJNA666695_S_NODE_17802_length_434_cov_4.363868_g16711_i0", "PRJNA666695", "17802", "434", "4.363868", "18.93918712", "Mantoniella tinhauana", "3097027", "Plants", "Plants", "167", "1.43e-36", "", "NTclustered", "gi|2735153277|gb|CP140062.1|", "3097027", "g16711", "i0", "89.922", "15.0529953917051", "129", "13", "30", "0", "306", "434", "5607109", "5606981", "Mantoniella tinhauana isolate LFS chromosome 1", "blastn", "6533", "167", "1", "Eukaryota", null, "Viridiplantae", "Chlorophyta", "Mamiellophyceae", "Mamiellales", "Mamiellaceae", "Mantoniella", "Mantoniella tinhauana"], [3182693, "PRJNA666695_S_NODE_19403_length_419_cov_8.611111_g18311_i0", "PRJNA666695", "19403", "419", "8.611111", "36.08055509", "Polytomella sp. Pringsheim 198.80", "37502", "Plants", "Plants", "169", "3.8399999999999995e-37", "", "NTclustered", "gi|402244316|emb|FR686759.1|", "37502", "g18311", "i0", "81.683", "2.06443914081146", "202", "37", "48", "0", "218", "419", "1159", "958", "Polytomella sp. Pringsheim 198.80 mRNA for 40S ribosomal protein L3 (rpl3 gene)", "blastn", "865", "169", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Chlamydomonadales", "Chlamydomonadaceae", "Polytomella", "Polytomella sp. Pringsheim 198.80"], [5734387, "PRJNA666695_S_NODE_147505_length_179_cov_2.333333_g146411_i0", "PRJNA666695", "147505", "179", "2.333333", "4.17666607", "Monoraphidium neglectum", "145388", "Plants", "Plants", "52.8", "0.015", "", "NTclustered", "gi|926777441|ref|XM_014041741.1|", "145388", "g146411", "i0", "100", "0.156424581005587", "28", "0", "16", "0", "24", "51", "1969", "1996", "Monoraphidium neglectum serine/threonine-protein kinase TTK/MPS1 mRNA", "blastn", "28", "52.8", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Sphaeropleales", "Selenastraceae", "Monoraphidium", "Monoraphidium neglectum"], [7008642, "PRJNA666695_S_NODE_106146_length_213_cov_3.209302_g105052_i0", "PRJNA666695", "106146", "213", "3.209302", "6.83581326", "Chloropicon roscoffensis", "1461544", "Plants", "Plants", "84.2", "6.65e-12", "", "NTclustered", "gi|2863418128|gb|CP145462.1|", "1461544", "g105052", "i0", "91.667", "0.563380281690141", "60", "5", "28", "0", "152", "211", "753307", "753366", "Chloropicon roscoffensis strain RCC2335 chromosome 3", "blastn", "120", "84.2", "1", "Eukaryota", null, "Viridiplantae", "Chlorophyta", "Chloropicophyceae", "Chloropicales", "Chloropicaceae", "Chloropicon", "Chloropicon roscoffensis"], [10835521, "PRJNA666695_S_NODE_173789_length_162_cov_2.280992_g172695_i0", "PRJNA666695", "173789", "162", "2.280992", "3.69520704", "Mantoniella tinhauana", "3097027", "Plants", "Plants", "244", "2.07e-60", "", "NTclustered", "gi|2735153277|gb|CP140062.1|", "3097027", "g172695", "i0", "93.827", "100.117283950617", "162", "10", "100", "0", "1", "162", "2147903", "2148064", "Mantoniella tinhauana isolate LFS chromosome 1", "blastn", "16219", "244", "1", "Eukaryota", null, "Viridiplantae", "Chlorophyta", "Mamiellophyceae", "Mamiellales", "Mamiellaceae", "Mantoniella", "Mantoniella tinhauana"], [10837630, "PRJNA666695_S_NODE_91249_length_229_cov_2.590426_g90155_i0", "PRJNA666695", "91249", "229", "2.590426", "5.93207554", "Auxenochlorella protothecoides", "3075", "Plants", "Plants", "198", "2.48e-46", "", "NTclustered", "gi|760442584|ref|XM_011400059.1|", "3075", "g90155", "i0", "86.264", "83.2270742358079", "182", "25", "79", "0", "48", "229", "618", "437", "Auxenochlorella protothecoides NADH dehydrogenase [ubiquinone] iron-sulfur protein 8-A, mitochondrial partial mRNA", "blastn", "19059", "198", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Trebouxiophyceae", "Chlorellales", "Chlorellaceae", "Auxenochlorella", "Auxenochlorella protothecoides"], [11366883, "PRJNA666695_S_NODE_94449_length_225_cov_16.570652_g93355_i0", "PRJNA666695", "94449", "225", "16.570652", "37.283967", "Eukaryota", "2759", "Plants", "Plants", "198", "2.43e-46", "", "NTclustered", "gi|806787493|gb|KM233167.1|", "3088", "g93355", "i0", "99.091", "49.0266666666667", "110", "1", "49", "0", "16", "125", "441", "550", "Acutodesmus obliquus strain VRUC280 18S ribosomal RNA gene, partial sequence", "blastn", "11031", "198", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Sphaeropleales", "Scenedesmaceae", "Tetradesmus", "Tetradesmus obliquus"], [12111578, "PRJNA666695_S_NODE_38370_length_325_cov_2.672535_g37276_i0", "PRJNA666695", "38370", "325", "2.672535", "8.68573875", "Lobosphaera incisa", "312850", "Plants", "Plants", "52.8", "0.031", "", "NTclustered", "gi|725650896|ref|NC_025533.1|", "312850", "g37276", "i0", "100", "0.0861538461538462", "28", "0", "9", "0", "115", "142", "40386", "40359", "Lobosphaera incisa culture-collection SAG:2007 chloroplast, complete genome", "blastn", "28", "52.8", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Trebouxiophyceae", "Trebouxiales", "Trebouxiaceae", "Lobosphaera", "Lobosphaera incisa"], [13385221, "PRJNA666695_S_NODE_16411_length_447_cov_25.975369_g15320_i0", "PRJNA666695", "16411", "447", "25.975369", "116.10989943", "Chlamydomonas reinhardtii", "3055", "Plants", "Plants", "106", "3.28e-18", "", "NTclustered", "gi|2082260798|ref|XM_001697008.2|", "3055", "g15320", "i0", "92", "1.30425055928412", "75", "6", "17", "0", "223", "297", "957", "1031", "Chlamydomonas reinhardtii uncharacterized protein (CHLRE_12g520500v5), mRNA", "blastn", "583", "106", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Chlamydomonadales", "Chlamydomonadaceae", "Chlamydomonas", "Chlamydomonas reinhardtii"], [13916566, "PRJNA666695_S_NODE_1411_length_1267_cov_22.891517_g986_i0", "PRJNA666695", "1411", "1267", "22.891517", "290.03552039", "Trebouxiophyceae", "75966", "Plants", "Plants", "63.9", "5.98e-5", "", "NTclustered", "gi|371782132|emb|HE610164.1|", "33092", "g986", "i0", "95", "4.87371744277822", "40", "2", "3", "0", "399", "438", "37", "76", "Koliella longiseta plastid partial 23S rRNA gene, strain SAG 470-1", "blastn", "6175", "63.9", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Trebouxiophyceae", "Prasiolales", "Koliellaceae", "Koliella", "Koliella longiseta"], [15934817, "PRJNA666695_S_NODE_23933_length_387_cov_6.300578_g22840_i0", "PRJNA666695", "23933", "387", "6.300578", "24.38323686", "Micromonas commoda", "296587", "Plants", "Plants", "169", "3.5199999999999997e-37", "", "NTclustered", "gi|255072468|ref|XM_002499863.1|", "296587", "g22840", "i0", "85.625", "31.8940568475452", "160", "23", "41", "0", "192", "351", "191", "32", "Micromonas commoda predicted protein mRNA", "blastn", "12343", "169", "1", "Eukaryota", null, "Viridiplantae", "Chlorophyta", "Mamiellophyceae", "Mamiellales", "Mamiellaceae", "Micromonas", "Micromonas commoda"], [18485107, "PRJNA666695_S_NODE_5575_length_691_cov_60.810769_g2466_i1", "PRJNA666695", "5575", "691", "60.810769", "420.20241379", "Valonia macrophysa", "432605", "Plants", "Plants", "527", "9.399999999999999e-145", "", "NTclustered", "gi|969822378|gb|KT950956.1|", "432605", "g2466", "i1", "82.212", "84.9001447178003", "624", "99", "89", "9", "1", "618", "262", "879", "Valonia macrophysa isolate 1528 actin gene, partial cds", "blastn", "58666", "527", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Ulvophyceae", "Cladophorales", "Valoniaceae", "Valonia", "Valonia macrophysa"], [19758740, "PRJNA666695_S_NODE_20696_length_409_cov_11.586957_g19603_i0", "PRJNA666695", "20696", "409", "11.586957", "47.39065413", "Coccomyxa subellipsoidea", "248742", "Plants", "Plants", "145", "6.3000000000000005e-30", "", "NTclustered", "gi|545374542|ref|XM_005651492.1|", "574566", "g19603", "i0", "80.198", "45.1002444987775", "202", "32", "48", "8", "6", "203", "134", "331", "Coccomyxa subellipsoidea C-169 hypothetical protein mRNA", "blastn", "18446", "145", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Trebouxiophyceae", null, "Coccomyxaceae", "Coccomyxa", "Coccomyxa subellipsoidea"], [19758803, "PRJNA666695_S_NODE_22816_length_394_cov_7.980170_g21723_i0", "PRJNA666695", "22816", "394", "7.98017", "31.4418698", "Micromonas commoda", "296587", "Plants", "Plants", "187", "9.899999999999997e-43", "", "NTclustered", "gi|255089924|ref|XM_002506838.1|", "296587", "g21723", "i0", "82.273", "21.7284263959391", "220", "35", "55", "4", "177", "394", "328", "111", "Micromonas commoda autophagy-related protein 8 (ATG8), mRNA", "blastn", "8561", "187", "1", "Eukaryota", null, "Viridiplantae", "Chlorophyta", "Mamiellophyceae", "Mamiellales", "Mamiellaceae", "Micromonas", "Micromonas commoda"], [19760283, "PRJNA666695_S_NODE_84516_length_237_cov_2.346939_g83422_i0", "PRJNA666695", "84516", "237", "2.346939", "5.56224543", "Chlamydomonas reinhardtii", "3055", "Plants", "Plants", "52.8", "0.021", "", "NTclustered", "gi|2082240264|ref|XM_043060006.1|", "3055", "g83422", "i0", "92.105", "0.160337552742616", "38", "2", "16", "1", "22", "58", "2523", "2560", "Chlamydomonas reinhardtii uncharacterized protein (CHLRE_02g117900v5), mRNA", "blastn", "38", "52.8", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Chlamydomonadales", "Chlamydomonadaceae", "Chlamydomonas", "Chlamydomonas reinhardtii"], [21565165, "PRJNA666695_S_NODE_54577_length_283_cov_7.983471_g53483_i0", "PRJNA666695", "54577", "283", "7.983471", "22.59322293", "Eukaryota", "2759", "Plants", "Plants", "58.4", "5.61e-4", "", "NTclustered", "gi|441165|dbj|D13324.1|CHLSSU", "3072", "g53483", "i0", "100", "12.8127208480565", "31", "0", "11", "0", "253", "283", "99", "129", "'Chlorella' ellipsoidea gene for small subunit rRNA, partial sequence", "blastn", "3626", "58.4", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Trebouxiophyceae", "Chlorellales", "Chlorellaceae", "Pseudochlorella", "Pseudochlorella pringsheimii"], [23583003, "PRJNA666695_S_NODE_11979_length_507_cov_13.903433_g10909_i0", "PRJNA666695", "11979", "507", "13.903433", "70.49040531", "Prototheca wickerhamii", "3111", "Plants", "Plants", "161", "7.9e-35", "", "NTclustered", "gi|1929550831|gb|MN794237.1|", "3111", "g10909", "i0", "79.825", "10.0512820512821", "228", "40", "44", "6", "78", "302", "41803", "42027", "Prototheca wickerhamii strain DBVPG mitochondrion, complete genome", "blastn", "5096", "161", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Trebouxiophyceae", "Chlorellales", "Chlorellaceae", "Prototheca", "Prototheca wickerhamii"], [24856212, "PRJNA666695_S_NODE_102060_length_217_cov_3.801136_g100966_i0", "PRJNA666695", "102060", "217", "3.801136", "8.24846512", "Koliella sp. HS-2024a", "3231931", "Plants", "Plants", "141", "3.98e-29", "", "NTclustered", "gi|2754686484|gb|PP990793.1|", "3231931", "g100966", "i0", "79.602", "56.8709677419355", "201", "37", "92", "4", "9", "207", "70462", "70660", "Koliella sp. HS-2024a strain FACHB-3607 chloroplast, complete genome", "blastn", "12341", "141", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Trebouxiophyceae", "Prasiolales", "Koliellaceae", "Koliella", "Koliella sp. HS-2024a"], [24858955, "PRJNA666695_S_NODE_56260_length_280_cov_3.447699_g55166_i0", "PRJNA666695", "56260", "280", "3.447699", "9.6535572", "Mantoniella tinhauana", "3097027", "Plants", "Plants", "62.1", "4.29e-5", "", "NTclustered", "gi|2735153277|gb|CP140062.1|", "3097027", "g55166", "i0", "95", "10.3857142857143", "40", "1", "14", "1", "162", "200", "5639578", "5639539", "Mantoniella tinhauana isolate LFS chromosome 1", "blastn", "2908", "62.1", "1", "Eukaryota", null, "Viridiplantae", "Chlorophyta", "Mamiellophyceae", "Mamiellales", "Mamiellaceae", "Mantoniella", "Mantoniella tinhauana"], [24859632, "PRJNA666695_S_NODE_87100_length_234_cov_1.782383_g86006_i0", "PRJNA666695", "87100", "234", "1.782383", "4.17077622", "Chlamydomonas reinhardtii", "3055", "Plants", "Plants", "122", "1.5699999999999994e-23", "", "NTclustered", "gi|2082235968|ref|XM_043058303.1|", "3055", "g86006", "i0", "89.796", "0.837606837606838", "98", "6", "41", "3", "136", "231", "2468", "2373", "Chlamydomonas reinhardtii uncharacterized protein (CHLRE_01g011100v5), mRNA", "blastn", "196", "122", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Chlamydomonadales", "Chlamydomonadaceae", "Chlamydomonas", "Chlamydomonas reinhardtii"], [25389352, "PRJNA666695_S_NODE_22080_length_399_cov_20.058659_g20987_i0", "PRJNA666695", "22080", "399", "20.058659", "80.03404941", "Chlorophyta", "3041", "Plants", "Plants", "182", "4.67e-41", "", "NTclustered", "gi|635557420|emb|FN984965.1|", "37502", "g20987", "i0", "80.328", "16.5989974937343", "244", "44", "61", "4", "12", "253", "1213", "1454", "Polytomella sp. Pringsheim 198.80 mRNA for S-Adenosyl homocysteine hydrolase (sah1 gene)", "blastn", "6623", "183", "0.994535519125683", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Chlamydomonadales", "Chlamydomonadaceae", "Polytomella", "Polytomella sp. Pringsheim 198.80"]], "truncated": false, "filtered_table_rows_count": 22, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "blastn", "p1": "PRJNA666695", "p2": "Chlorophyta"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA666695&tax_phylum=Chlorophyta", "results": [{"value": "PRJNA666695", "label": "PRJNA666695", "count": 22, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&tax_phylum=Chlorophyta", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA666695&tax_phylum=Chlorophyta", "results": [{"value": "blastn", "label": "blastn", "count": 22, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA666695&tax_phylum=Chlorophyta", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA666695&tax_phylum=Chlorophyta", "results": [{"value": "Eukaryota", "label": "Eukaryota", "count": 22, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA666695&tax_phylum=Chlorophyta&tax_superkingdom=Eukaryota", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA666695&tax_phylum=Chlorophyta", "results": [{"value": "core chlorophytes", "label": "core chlorophytes", "count": 16, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA666695&tax_phylum=Chlorophyta&tax_clade=core+chlorophytes", "selected": false}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA666695&tax_phylum=Chlorophyta", "results": [{"value": "Viridiplantae", "label": "Viridiplantae", "count": 22, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA666695&tax_phylum=Chlorophyta&tax_kingdom=Viridiplantae", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA666695&tax_phylum=Chlorophyta", "results": [{"value": "Chlorophyta", "label": "Chlorophyta", "count": 22, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA666695", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 194.5251659999485}