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Neff eukaryotic translation initiation factor 5a-2, putative (ACA1_326180), partial mRNA", "blastn", "73", "75", "1", "Eukaryota", "Amoebozoa", null, "Discosea", null, "Longamoebia", "Acanthamoebidae", "Acanthamoeba", "Acanthamoeba castellanii"], [14632335, "PRJNA631796_P_NODE_4792_length_316_cov_5.058824_g4514_i0", "PRJNA631796", "4792", "316", "5.058824", "15.98588384", "Protacanthamoeba bohemica", "325062", "Discosea", "other_Eukaryota", "416", "9.109999999999999e-112", "", "NTclustered", "gi|2806326584|gb|PQ345834.1|", "325062", "g4514", "i0", "90.596", "45.9556962025316", "319", "23", "100", "6", "1", "316", "455", "141", "Protacanthamoeba bohemica isolate 6FSb1 small subunit ribosomal RNA gene, partial sequence", "blastn", "14522", "416", "1", "Eukaryota", "Amoebozoa", null, "Discosea", null, "Longamoebia", "Acanthamoebidae", "Protacanthamoeba", "Protacanthamoeba bohemica"], [14632379, "PRJNA631796_S_NODE_1652_length_457_cov_14.446970_g1485_i0", "PRJNA631796", "1652", "457", "14.44697", "66.0226529", "Acanthamoeba castellanii", "5755", "Discosea", "other_Eukaryota", "584", "3.5299999999999983e-162", "", "NTclustered", "gi|300078498|gb|GU001160.1|", "5755", "g1485", "i0", "89.706", "13.8271334792123", "476", "23", "100", "18", "1", "457", "5462", "5930", "Acanthamoeba castellanii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence", "blastn", "6319", "584", "1", "Eukaryota", "Amoebozoa", null, "Discosea", null, "Longamoebia", "Acanthamoebidae", "Acanthamoeba", "Acanthamoeba castellanii"], [15906219, "PRJNA631796_P_NODE_14253_length_175_cov_5.307018_g13975_i0", "PRJNA631796", "14253", "175", "5.307018", "9.2872815", "Paramoeba branchiphila", "308475", "Discosea", "other_Eukaryota", "128", "2.38e-25", "", "NTclustered", "gi|226347442|gb|FJ807261.1|", "308475", "g13975", "i0", "84.496", "45.2457142857143", "129", "20", "74", "0", "43", "171", "610", "482", "Neoparamoeba branchiphila strain AMOP1 elongation factor 1 alpha gene, partial cds", "blastn", "7918", "128", "1", "Eukaryota", "Amoebozoa", null, "Discosea", "Flabellinia", "Dactylopodida", "Paramoebidae", "Paramoeba", "Paramoeba branchiphila"], [15906222, "PRJNA631796_P_NODE_1513_length_579_cov_103.258687_g1243_i0", "PRJNA631796", "1513", "579", "103.258687", "597.86779773", "Acanthamoeba castellanii", "5755", "Discosea", "other_Eukaryota", "802", "0", "", "NTclustered", "gi|300078498|gb|GU001160.1|", "5755", "g1243", "i0", "91.751", "23.3765112262522", "594", "23", "99", "18", "1", "575", "5346", "5932", "Acanthamoeba castellanii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence", "blastn", "13535", "802", "1", "Eukaryota", "Amoebozoa", null, "Discosea", null, "Longamoebia", "Acanthamoebidae", "Acanthamoeba", "Acanthamoeba castellanii"], [21005802, "PRJNA631796_P_NODE_5117_length_305_cov_1.516393_g4839_i0", "PRJNA631796", "5117", "305", "1.516393", "4.62499865", "Acanthamoeba castellanii", "5755", "Discosea", "other_Eukaryota", "315", "3.28e-81", "", "NTclustered", "gi|470523982|ref|XM_004367740.1|", "1257118", "g4839", "i0", "85.294", "35.727868852459", "306", "43", "100", "2", "1", "305", "312", "8", "Acanthamoeba castellanii str. Neff eukaryotic translation initiation factor 5a-2, putative (ACA1_326180), partial mRNA", "blastn", "10897", "315", "1", "Eukaryota", "Amoebozoa", null, "Discosea", null, "Longamoebia", "Acanthamoebidae", "Acanthamoeba", "Acanthamoeba castellanii"], [21005860, "PRJNA631796_S_NODE_31817_length_249_cov_4.031915_g31650_i0", "PRJNA631796", "31817", "249", "4.031915", "10.03946835", "Vermamoeba vermiformis", "5778", "Tubulinea", "other_Eukaryota", "455", "1.47e-123", "", "NTclustered", "gi|909719645|gb|KT185625.1|", "5778", "g31650", "i0", "99.598", "3.06024096385542", "249", "1", "100", "0", "1", "249", "6069", "6317", "Vermamoeba vermiformis isolate 1 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence", "blastn", "762", "455", "1", "Eukaryota", "Amoebozoa", null, "Tubulinea", "Echinamoebida", null, null, "Vermamoeba", "Vermamoeba vermiformis"], [22280464, "PRJNA631796_P_NODE_12958_length_202_cov_0.907801_g12680_i0", "PRJNA631796", "12958", "202", "0.907801", "1.83375802", "Physarum polycephalum", "5791", "Evosea", "other_Eukaryota", "224", "3.52e-54", "", "NTclustered", "gi|175957|gb|M19232.1|SLMRRMPP", "5791", "g12680", "i0", "86.829", "2.02970297029703", "205", "21", "100", "6", "1", "202", "101", "302", "Slime mold (P.polycephalum) 28S large subunit rRNA, 5' end", "blastn", "410", "224", "1", "Eukaryota", "Amoebozoa", null, "Evosea", "Eumycetozoa", "Physariida", "Physaraceae", "Physarum", "Physarum polycephalum"], [23555966, "PRJNA631796_P_NODE_3959_length_350_cov_1.667820_g3681_i0", "PRJNA631796", "3959", "350", "1.66782", "5.83737", "Acanthamoeba castellanii", "5755", "Discosea", "other_Eukaryota", "503", "7.59e-138", "", "NTclustered", "gi|470399109|ref|XM_004335331.1|", "1257118", "g3681", "i0", "92.571", "4.9", "350", "26", "100", "0", "1", "350", "523", "174", "Acanthamoeba castellanii str. Neff elongation factor Tu domain 2/elongation factor G Cterminus domain containing protein (ACA1_240830), partial mRNA", "blastn", "1715", "503", "1", "Eukaryota", "Amoebozoa", null, "Discosea", null, "Longamoebia", "Acanthamoebidae", "Acanthamoeba", "Acanthamoeba castellanii"], [23555984, "PRJNA631796_P_NODE_7979_length_240_cov_2.251397_g7701_i0", "PRJNA631796", "7979", "240", "2.251397", "5.4033528", "Acanthamoeba castellanii", "5755", "Discosea", "other_Eukaryota", "337", "5.32e-88", "", "NTclustered", "gi|470382655|ref|XM_004333851.1|", "1257118", "g7701", "i0", "92.05", "0.995833333333333", "239", "19", "99", "0", "2", "240", "374", "136", "Acanthamoeba castellanii str. Neff serine-tRNA ligase domain containing protein (ACA1_274400), partial mRNA", "blastn", "239", "337", "1", "Eukaryota", "Amoebozoa", null, "Discosea", null, "Longamoebia", "Acanthamoebidae", "Acanthamoeba", "Acanthamoeba castellanii"], [23556015, "PRJNA631796_S_NODE_16079_length_275_cov_1.757009_g15912_i0", "PRJNA631796", "16079", "275", "1.757009", "4.83177475", "Acanthamoeba castellanii", "5755", "Discosea", "other_Eukaryota", "407", "4.6799999999999995e-109", "", "NTclustered", "gi|470394462|ref|XM_004334945.1|", "1257118", "g15912", "i0", "97.095", "4.38181818181818", "241", "7", "88", "0", "35", "275", "1", "241", "Acanthamoeba castellanii str. Neff uncharacterized protein (ACA1_096510), partial mRNA", "blastn", "1205", "407", "1", "Eukaryota", "Amoebozoa", null, "Discosea", null, "Longamoebia", "Acanthamoebidae", "Acanthamoeba", "Acanthamoeba castellanii"], [23556045, "PRJNA631796_S_NODE_8919_length_303_cov_2.690083_g8752_i0", "PRJNA631796", "8919", "303", "2.690083", "8.15095149", "Acanthamoeba castellanii", "5755", "Discosea", "other_Eukaryota", "427", "4.01e-115", "", "NTclustered", "gi|562028|gb|U12386.1|ACU12386", "5755", "g8752", "i0", "92.105", "34.2409240924092", "304", "22", "100", "2", "1", "303", "1308", "1006", "Acanthamoeba castellanii mitochondrion, complete genome", "blastn", "10375", "427", "1", "Eukaryota", "Amoebozoa", null, "Discosea", null, "Longamoebia", "Acanthamoebidae", "Acanthamoeba", "Acanthamoeba castellanii"], [24103916, "PRJNA631796_P_NODE_4439_length_328_cov_8.943820_g4161_i0", "PRJNA631796", "4439", "328", "8.94382", "29.3357296", "Eukaryota", "2759", "unresolved_Eukaryota", "other_Eukaryota", "579", "1.1399999999999999e-160", "", "NTclustered", "gi|909719646|gb|KT185626.1|", "5755", "g4161", "i0", "98.476", "49.9451219512195", "328", "5", "100", "0", "1", "328", "3630", "3957", "Acanthamoeba castellanii 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence", "blastn", "16382", "579", "1", "Eukaryota", "Amoebozoa", null, "Discosea", null, "Longamoebia", "Acanthamoebidae", "Acanthamoeba", "Acanthamoeba castellanii"], [24829677, "PRJNA631796_P_NODE_5240_length_301_cov_1.441667_g4962_i0", "PRJNA631796", "5240", "301", "1.441667", "4.33941767", "Acanthamoeba castellanii", "5755", "Discosea", "other_Eukaryota", "311", "4.19e-80", "", "NTclustered", "gi|470392774|ref|XM_004334753.1|", "1257118", "g4962", "i0", "87.879", "0.996677740863787", "264", "32", "88", "0", "2", "265", "264", "1", "Acanthamoeba castellanii str. Neff zinc finger, c2h2 type domain containing protein (ACA1_093340), partial mRNA", "blastn", "300", "311", "1", "Eukaryota", "Amoebozoa", null, "Discosea", null, "Longamoebia", "Acanthamoebidae", "Acanthamoeba", "Acanthamoeba castellanii"]], "truncated": false, "filtered_table_rows_count": 37, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_clade\" = :p2 order by rowid limit 101", "params": {"p0": "blastn", "p1": "PRJNA631796", "p2": "Amoebozoa"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA631796&tax_clade=Amoebozoa", "results": [{"value": "PRJNA631796", "label": "PRJNA631796", "count": 37, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&tax_clade=Amoebozoa", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA631796&tax_clade=Amoebozoa", "results": [{"value": "blastn", "label": "blastn", "count": 37, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA631796&tax_clade=Amoebozoa", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA631796&tax_clade=Amoebozoa", "results": [{"value": "Eukaryota", "label": "Eukaryota", "count": 37, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA631796&tax_clade=Amoebozoa&tax_superkingdom=Eukaryota", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA631796&tax_clade=Amoebozoa", "results": [{"value": "Amoebozoa", "label": "Amoebozoa", "count": 37, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA631796", "selected": true}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA631796&tax_clade=Amoebozoa", "results": [], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA631796&tax_clade=Amoebozoa", "results": [{"value": "Discosea", "label": "Discosea", "count": 29, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA631796&tax_clade=Amoebozoa&tax_phylum=Discosea", "selected": false}, {"value": "Evosea", "label": "Evosea", "count": 4, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA631796&tax_clade=Amoebozoa&tax_phylum=Evosea", "selected": false}, {"value": "Tubulinea", "label": "Tubulinea", "count": 4, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA631796&tax_clade=Amoebozoa&tax_phylum=Tubulinea", "selected": false}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 272.39587099757046}