{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"blastn\", bioproject = \"PRJNA613025\" and tax_phylum = \"Chlamydiota\"", "rows": [[1867687, "PRJNA613025_S_NODE_20622_length_215_cov_1.228916_g20468_i0", "PRJNA613025", "20622", "215", "1.228916", "2.6421694", "Candidatus Protochlamydia naegleriophila", "389348", "Bacteria", "Bacteria", "231", "2.27e-56", "", "NTclustered", "gi|971146634|emb|LN879502.1|", "389348", "g20468", "i0", "86.385", "116.311627906977", "213", "27", "98", "1", "3", "213", "1249378", "1249166", "Protochlamydia naegleriophila genome assembly PNK1, chromosome : cPNK", "blastn", "25007", "231", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Parachlamydiaceae", "Candidatus Protochlamydia", "Candidatus Protochlamydia naegleriophila"], [3700444, "PRJNA613025_S_NODE_27143_length_178_cov_1.953488_g26989_i0", "PRJNA613025", "27143", "178", "1.953488", "3.47720864", "Chlamydiia", "204429", "Bacteria", "Bacteria", "220", "3.8999999999999997e-53", "", "NTclustered", "gi|2874253712|emb|OY969554.1|", "174324", "g26989", "i0", "90.173", "266.247191011236", "173", "12", "96", "5", "1", "170", "1827139", "1826969", "MAG: uncultured Chlamydiales bacterium isolate MFD04540.bin.c.3 genome assembly, chromosome: 1", "blastn", "47392", "220", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Chlamydiales", null, null, "uncultured Chlamydiales bacterium"], [4419448, "PRJNA613025_S_NODE_27464_length_177_cov_1.367188_g27310_i0", "PRJNA613025", "27464", "177", "1.367188", "2.41992276", "Parachlamydiales bacterium", "2052178", "Bacteria", "Bacteria", "239", "1.07e-58", "", "NTclustered", "gi|2874253843|emb|OY969899.1|", "2052178", "g27310", "i0", "90.96", "163.067796610169", "177", "16", "100", "0", "1", "177", "2624378", "2624554", "MAG: Parachlamydiales bacterium isolate MFD00082.bin.c.1 genome assembly, chromosome: 1", "blastn", "28863", "239", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", null, null, "Parachlamydiales bacterium"], [5695200, "PRJNA613025_S_NODE_16425_length_257_cov_4.456731_g16271_i0", "PRJNA613025", "16425", "257", "4.4567310000000004", "11.45379867", "uncultured Parachlamydiaceae bacterium", "464461", "Bacteria", "Bacteria", "396", "9.379999999999997e-106", "", "NTclustered", "gi|2874253811|emb|OY969795.1|", "464461", "g16271", "i0", "95.219", "143.996108949416", "251", "11", "99", "1", "2", "252", "655776", "656025", "MAG: uncultured Parachlamydiaceae bacterium isolate MFD05502.bin.c.3 genome assembly, chromosome: 1", "blastn", "37007", "396", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Parachlamydiaceae", null, "uncultured Parachlamydiaceae bacterium"], [7526518, "PRJNA613025_S_NODE_16086_length_262_cov_2.079812_g15932_i0", "PRJNA613025", "16086", "262", "2.079812", "5.44910744", "Parachlamydia", "83551", "Bacteria", "Bacteria", "285", "2.1699999999999997e-72", "", "NTclustered", "gi|470491594|ref|NR_077046.1|", "83552", "g15932", "i0", "86.59", "181.114503816794", "261", "31", "99", "4", "3", "262", "498", "241", "Parachlamydia acanthamoebae strain UV-7 23S ribosomal RNA gene, complete sequence", "blastn", "47452", "285", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Parachlamydiaceae", "Parachlamydia", "Parachlamydia acanthamoebae"], [14620709, "PRJNA613025_S_NODE_21252_length_210_cov_2.950311_g21098_i0", "PRJNA613025", "21252", "210", "2.950311", "6.1956531", "uncultured Parachlamydiaceae bacterium", "464461", "Bacteria", "Bacteria", "285", "1.67e-72", "", "NTclustered", "gi|2874253811|emb|OY969795.1|", "464461", "g21098", "i0", "91.346", "96.9428571428571", "208", "18", "99", "0", "3", "210", "2061483", "2061276", "MAG: uncultured Parachlamydiaceae bacterium isolate MFD05502.bin.c.3 genome assembly, chromosome: 1", "blastn", "20358", "285", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Parachlamydiaceae", null, "uncultured Parachlamydiaceae bacterium"], [14621058, "PRJNA613025_S_NODE_5512_length_639_cov_2.562712_g1720_i1", "PRJNA613025", "5512", "639", "2.562712", "16.37572968", "uncultured Parachlamydiaceae bacterium", "464461", "Bacteria", "Bacteria", "907", "0", "", "NTclustered", "gi|2874253811|emb|OY969795.1|", "464461", "g1720", "i1", "92.415", "111.400625978091", "646", "34", "99", "11", "2", "639", "653964", "654602", "MAG: uncultured Parachlamydiaceae bacterium isolate MFD05502.bin.c.3 genome assembly, chromosome: 1", "blastn", "71185", "907", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Parachlamydiaceae", null, "uncultured Parachlamydiaceae bacterium"], [15177069, "PRJNA613025_S_NODE_17692_length_242_cov_2.129534_g17538_i0", "PRJNA613025", "17692", "242", "2.129534", "5.15347228", "Parachlamydia", "83551", "Bacteria", "Bacteria", "383", "6.81e-102", "", "NTclustered", "gi|470491594|ref|NR_077046.1|", "83552", "g17538", "i0", "96.93", "157.078512396694", "228", "7", "94", "0", "15", "242", "2398", "2625", "Parachlamydia acanthamoebae strain UV-7 23S ribosomal RNA gene, complete sequence", "blastn", "38013", "383", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Parachlamydiaceae", "Parachlamydia", "Parachlamydia acanthamoebae"], [15894722, "PRJNA613025_S_NODE_22713_length_201_cov_1.368421_g22559_i0", "PRJNA613025", "22713", "201", "1.368421", "2.75052621", "Simkaniaceae bacterium", "2698248", "Bacteria", "Bacteria", "270", "4.43e-68", "", "NTclustered", "gi|2041293252|gb|CP073763.1|", "2698248", "g22559", "i0", "91.133", "56.6965174129353", "203", "12", "100", "6", "1", "201", "7746", "7944", "MAG: Simkaniaceae bacterium isolate M30B1 chromosome, complete genome", "blastn", "11396", "270", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Simkaniaceae", null, "Simkaniaceae bacterium"], [18443929, "PRJNA613025_S_NODE_27395_length_177_cov_1.984375_g27241_i0", "PRJNA613025", "27395", "177", "1.984375", "3.51234375", "uncultured Parachlamydiaceae bacterium", "464461", "Bacteria", "Bacteria", "244", "2.3e-60", "", "NTclustered", "gi|2874253811|emb|OY969795.1|", "464461", "g27241", "i0", "92", "151.033898305085", "175", "13", "98", "1", "4", "177", "655074", "654900", "MAG: uncultured Parachlamydiaceae bacterium isolate MFD05502.bin.c.3 genome assembly, chromosome: 1", "blastn", "26733", "244", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Parachlamydiaceae", null, "uncultured Parachlamydiaceae bacterium"], [20993892, "PRJNA613025_S_NODE_16017_length_263_cov_2.401869_g15863_i0", "PRJNA613025", "16017", "263", "2.401869", "6.31691547", "Candidatus Criblamydia sequanensis", "340071", "Bacteria", "Bacteria", "254", "6.13e-63", "", "NTclustered", "gi|636559636|ref|NR_115696.1|", "1437425", "g15863", "i0", "85.484", "98.3840304182509", "248", "30", "94", "3", "1", "248", "290", "49", "Criblamydia sequanensis CRIB-18 16S ribosomal RNA, partial sequence", "blastn", "25875", "254", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Candidatus Criblamydiaceae", "Candidatus Criblamydia", "Candidatus Criblamydia sequanensis"], [22268612, "PRJNA613025_S_NODE_10638_length_374_cov_3.289231_g10485_i0", "PRJNA613025", "10638", "374", "3.289231", "12.30172394", "Parachlamydiales bacterium", "2052178", "Bacteria", "Bacteria", "442", "1.8099999999999994e-119", "", "NTclustered", "gi|2874253843|emb|OY969899.1|", "2052178", "g10485", "i0", "88.172", "200.032085561497", "372", "43", "99", "1", "1", "371", "2633945", "2634316", "MAG: Parachlamydiales bacterium isolate MFD00082.bin.c.1 genome assembly, chromosome: 1", "blastn", "74812", "442", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", null, null, "Parachlamydiales bacterium"], [22269241, "PRJNA613025_S_NODE_4518_length_739_cov_4.262319_g4381_i0", "PRJNA613025", "4518", "739", "4.262319", "31.49853741", "uncultured Chlamydiales bacterium", "174324", "Bacteria", "Bacteria", "1343", "0", "", "NTclustered", "gi|18029193|gb|AF364564.1|", "174324", "g4381", "i0", "99.459", "107.407307171854", "739", "4", "100", "0", "1", "739", "760", "22", "Uncultured Chlamydiales bacterium clone P-4 16S ribosomal RNA gene, partial sequence", "blastn", "79374", "1343", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Chlamydiales", null, null, "uncultured Chlamydiales bacterium"], [23543965, "PRJNA613025_S_NODE_11579_length_349_cov_3.093333_g11425_i0", "PRJNA613025", "11579", "349", "3.093333", "10.79573217", "uncultured Parachlamydiaceae bacterium", "464461", "Bacteria", "Bacteria", "381", "3.7e-101", "", "NTclustered", "gi|2874253811|emb|OY969795.1|", "464461", "g11425", "i0", "86.744", "111.845272206304", "347", "40", "99", "6", "6", "349", "653458", "653801", "MAG: uncultured Parachlamydiaceae bacterium isolate MFD05502.bin.c.3 genome assembly, chromosome: 1", "blastn", "39034", "381", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Parachlamydiaceae", null, "uncultured Parachlamydiaceae bacterium"]], "truncated": false, "filtered_table_rows_count": 14, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "blastn", "p1": "PRJNA613025", "p2": "Chlamydiota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA613025&tax_phylum=Chlamydiota", "results": [{"value": "PRJNA613025", "label": "PRJNA613025", "count": 14, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&tax_phylum=Chlamydiota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA613025&tax_phylum=Chlamydiota", "results": [{"value": "blastn", "label": "blastn", "count": 14, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA613025&tax_phylum=Chlamydiota", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA613025&tax_phylum=Chlamydiota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 14, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA613025&tax_phylum=Chlamydiota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA613025&tax_phylum=Chlamydiota", "results": [{"value": "PVC group", "label": "PVC group", "count": 14, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA613025&tax_phylum=Chlamydiota&tax_clade=PVC+group", "selected": false}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA613025&tax_phylum=Chlamydiota", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 14, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA613025&tax_phylum=Chlamydiota&tax_kingdom=Pseudomonadati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA613025&tax_phylum=Chlamydiota", "results": [{"value": "Chlamydiota", "label": "Chlamydiota", "count": 14, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA613025", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 175.19955700845458}