{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"blastn\", bioproject = \"PRJNA613025\" and tax_clade = \"core chlorophytes\"", "rows": [[2423940, "PRJNA613025_S_NODE_11162_length_359_cov_6.464516_g11008_i0", "PRJNA613025", "11162", "359", "6.464516", "23.20761244", "Eukaryota", "2759", "Plants", "Plants", "664", "0", "", "NTclustered", "gi|1714003650|gb|MN243923.1|", "3079", "g11008", "i0", "100", "99.8774373259053", "359", "0", "100", "0", "1", "359", "506", "864", "Chlorella sp. isolate CAVR01 small subunit ribosomal RNA gene, partial sequence", "blastn", "35856", "664", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Trebouxiophyceae", "Chlorellales", "Chlorellaceae", "Chlorella", "Chlorella sp."], [2423986, "PRJNA613025_S_NODE_18602_length_232_cov_7.551913_g18448_i0", "PRJNA613025", "18602", "232", "7.551913", "17.52043816", "Chlorophyta", "3041", "Plants", "Plants", "115", "2.61e-21", "", "NTclustered", "gi|15281672|gb|AF395512.1|", "51713", "g18448", "i0", "97.059", "36.2413793103448", "68", "2", "29", "0", "165", "232", "1902", "1835", "Stephanosphaera sp. UTEX-LB 2409 strain UTEX LB 2409 26S ribosomal RNA gene, partial sequence", "blastn", "8408", "115", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Chlamydomonadales", "Haematococcaceae", "Stephanosphaera", "Stephanosphaera sp. UTEX-LB 2409"], [2424081, "PRJNA613025_S_NODE_27962_length_175_cov_1.214286_g27808_i0", "PRJNA613025", "27962", "175", "1.214286", "2.1250005", "Micractinium", "126838", "Plants", "Plants", "252", "1.3499999999999999e-62", "", "NTclustered", "gi|1525820383|dbj|LC153789.1|", "532145", "g27808", "i0", "92.571", "98.36", "175", "13", "100", "0", "1", "175", "536", "710", "Micractinium reisseri gene for 28S ribosormal RNA, partial sequence, strain: SIT04", "blastn", "17213", "252", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Trebouxiophyceae", "Chlorellales", "Chlorellaceae", "Micractinium", "Micractinium reisseri"], [4419417, "PRJNA613025_S_NODE_25644_length_185_cov_1.845588_g25490_i0", "PRJNA613025", "25644", "185", "1.845588", "3.4143378", "Aegagropila linnaei", "162062", "Plants", "Plants", "124", "3.3e-24", "", "NTclustered", "gi|1169296929|gb|KY364699.1|", "162062", "g25490", "i0", "80", "4.92972972972973", "170", "32", "91", "2", "1", "169", "3970", "3802", "Aegagropila linnaei 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence", "blastn", "912", "124", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Ulvophyceae", "Cladophorales", "Pithophoraceae", "Aegagropila", "Aegagropila linnaei"], [4976841, "PRJNA613025_S_NODE_10944_length_366_cov_1.839117_g10790_i0", "PRJNA613025", "10944", "366", "1.839117", "6.73116822", "Trebouxiophyceae", "75966", "Plants", "Plants", "540", "6.08e-149", "", "NTclustered", "gi|1169296931|gb|KY364701.1|", "63676", "g10790", "i0", "94.134", "53.3551912568306", "358", "16", "97", "5", "8", "363", "5785", "5431", "Chloroidium ellipsoideum 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence", "blastn", "19528", "545", "0.990825688073395", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Trebouxiophyceae", "Watanabeales", "Watanabeaceae", "Chloroidium", "Chloroidium ellipsoideum"], [5695535, "PRJNA613025_S_NODE_32285_length_163_cov_1.973684_g32131_i0", "PRJNA613025", "32285", "163", "1.973684", "3.21710492", "Parachlorella kessleri", "3074", "Plants", "Plants", "291", "2.64e-74", "", "NTclustered", "gi|254798615|ref|NC_012978.1|", "3074", "g32131", "i0", "98.773", "144.907975460123", "163", "2", "100", "0", "1", "163", "94068", "93906", "Parachlorella kessleri chloroplast, complete genome", "blastn", "23620", "291", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Trebouxiophyceae", "Chlorellales", "Chlorellaceae", "Parachlorella", "Parachlorella kessleri"], [6969968, "PRJNA613025_S_NODE_15646_length_269_cov_2.086364_g15492_i0", "PRJNA613025", "15646", "269", "2.086364", "5.61231916", "Dicloster acuatus", "91190", "Plants", "Plants", "453", "5.78e-123", "", "NTclustered", "gi|725651324|ref|NC_025546.1|", "91190", "g15492", "i0", "97.037", "125.591078066914", "270", "7", "100", "1", "1", "269", "98819", "98550", "Dicloster acuatus culture-collection SAG:41.98 chloroplast, complete genome", "blastn", "33784", "453", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Trebouxiophyceae", "Chlorellales", "Chlorellaceae", "Dicloster", "Dicloster acuatus"], [9520123, "PRJNA613025_S_NODE_23508_length_196_cov_2.455782_g23354_i0", "PRJNA613025", "23508", "196", "2.455782", "4.81333272", "Dicloster acuatus", "91190", "Plants", "Plants", "276", "9.24e-70", "", "NTclustered", "gi|725651324|ref|NC_025546.1|", "91190", "g23354", "i0", "91.919", "104.015306122449", "198", "14", "100", "1", "1", "196", "104699", "104896", "Dicloster acuatus culture-collection SAG:41.98 chloroplast, complete genome", "blastn", "20387", "276", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Trebouxiophyceae", "Chlorellales", "Chlorellaceae", "Dicloster", "Dicloster acuatus"], [13345778, "PRJNA613025_S_NODE_18771_length_231_cov_1.516484_g18617_i0", "PRJNA613025", "18771", "231", "1.516484", "3.50307804", "Chlamydomonas incerta", "51695", "Plants", "Plants", "195", "3.24e-45", "", "NTclustered", "gi|74272614|gb|DQ122872.1|", "51695", "g18617", "i0", "81.974", "14.9437229437229", "233", "38", "100", "4", "1", "231", "576", "346", "Chlamydomonas incerta mitochondrial ADP/ATP translocator (ANT) mRNA, complete cds; nuclear gene for mitochondrial product", "blastn", "3452", "195", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Chlamydomonadales", "Chlamydomonadaceae", "Chlamydomonas", "Chlamydomonas incerta"], [13345849, "PRJNA613025_S_NODE_21591_length_208_cov_1.308176_g21437_i0", "PRJNA613025", "21591", "208", "1.308176", "2.72100608", "Coccomyxa subellipsoidea", "248742", "Plants", "Plants", "132", "2.27e-26", "", "NTclustered", "gi|545373616|ref|XM_005651099.1|", "574566", "g21437", "i0", "80.588", "78.8942307692308", "170", "33", "82", "0", "23", "192", "192", "361", "Coccomyxa subellipsoidea C-169 ribosomal protein L14b/L23e mRNA", "blastn", "16410", "132", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Trebouxiophyceae", null, "Coccomyxaceae", "Coccomyxa", "Coccomyxa subellipsoidea"], [13345901, "PRJNA613025_S_NODE_23571_length_196_cov_1.380952_g23417_i0", "PRJNA613025", "23571", "196", "1.380952", "2.70666592", "Stichococcus bacillaris", "37433", "Plants", "Plants", "246", "7.25e-61", "", "NTclustered", "gi|371782093|emb|HE610125.1|", "37433", "g23417", "i0", "88.325", "4.14285714285714", "197", "22", "100", "1", "1", "196", "7137", "7333", "Stichococcus bacillaris 18S rRNA gene (partial), 5.8S rRNA gene, 28S rRNA gene (partial), ITS1 and ITS2, strain SAG 379-2", "blastn", "812", "246", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Trebouxiophyceae", "Prasiolales", "Stichococcaceae", "Stichococcus", "Stichococcus bacillaris"], [13345950, "PRJNA613025_S_NODE_25631_length_185_cov_1.985294_g25477_i0", "PRJNA613025", "25631", "185", "1.985294", "3.6727939", "Chlorosarcinopsis eremi", "332213", "Plants", "Plants", "87.9", "4.33e-13", "", "NTclustered", "gi|1642525901|ref|NC_042250.1|", "332213", "g25477", "i0", "84.444", "2.01081081081081", "90", "12", "52", "2", "53", "142", "131318", "131405", "Chlorosarcinopsis eremi culture UTEX:1186 chloroplast, complete genome", "blastn", "372", "87.9", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Chlorosarcinales", "Chlorosarcinaceae", "Chlorosarcinopsis", "Chlorosarcinopsis eremi"], [15177210, "PRJNA613025_S_NODE_32112_length_164_cov_0.886957_g31958_i0", "PRJNA613025", "32112", "164", "0.886957", "1.45460948", "Chlamydomonadales", "3042", "Plants", "Plants", "86.1", "1.35e-12", "", "NTclustered", "gi|15281672|gb|AF395512.1|", "51713", "g31958", "i0", "94.545", "35.7378048780488", "55", "3", "34", "0", "110", "164", "1896", "1842", "Stephanosphaera sp. UTEX-LB 2409 strain UTEX LB 2409 26S ribosomal RNA gene, partial sequence", "blastn", "5861", "86.1", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Chlamydomonadales", "Haematococcaceae", "Stephanosphaera", "Stephanosphaera sp. UTEX-LB 2409"], [15894721, "PRJNA613025_S_NODE_22693_length_201_cov_1.690789_g22539_i0", "PRJNA613025", "22693", "201", "1.690789", "3.39848589", "Dicloster acuatus", "91190", "Plants", "Plants", "357", "3.31e-94", "", "NTclustered", "gi|725651324|ref|NC_025546.1|", "91190", "g22539", "i0", "98.995", "117.044776119403", "199", "2", "99", "0", "1", "199", "98775", "98973", "Dicloster acuatus culture-collection SAG:41.98 chloroplast, complete genome", "blastn", "23526", "357", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Trebouxiophyceae", "Chlorellales", "Chlorellaceae", "Dicloster", "Dicloster acuatus"], [18443851, "PRJNA613025_S_NODE_23955_length_194_cov_1.379310_g23801_i0", "PRJNA613025", "23955", "194", "1.37931", "2.6758614", "Monoraphidium neglectum", "145388", "Plants", "Plants", "52.8", "0.017", "", "NTclustered", "gi|926767819|ref|XM_014037508.1|", "145388", "g23801", "i0", "91.892", "0.190721649484536", "37", "3", "19", "0", "158", "194", "88", "124", "Monoraphidium neglectum hypothetical protein mRNA", "blastn", "37", "52.8", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Sphaeropleales", "Selenastraceae", "Monoraphidium", "Monoraphidium neglectum"], [18443939, "PRJNA613025_S_NODE_27715_length_176_cov_1.204724_g27561_i0", "PRJNA613025", "27715", "176", "1.204724", "2.12031424", "Chlorella sorokiniana", "3076", "Plants", "Plants", "75", "3.17e-9", "", "NTclustered", "gi|2323365057|gb|CP084621.1|", "3076", "g27561", "i0", "86.111", "4.57386363636364", "72", "6", "40", "4", "103", "173", "14678", "14610", "Chlorella sorokiniana strain SLA-04 mitochondrion, complete genome", "blastn", "805", "75", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Trebouxiophyceae", "Chlorellales", "Chlorellaceae", "Chlorella", "Chlorella sorokiniana"], [19000292, "PRJNA613025_S_NODE_30595_length_166_cov_1.307692_g30441_i0", "PRJNA613025", "30595", "166", "1.307692", "2.17076872", "Chlorellaceae", "35461", "Plants", "Plants", "279", "5.86e-71", "", "NTclustered", "gi|254798615|ref|NC_012978.1|", "3074", "g30441", "i0", "96.988", "176.234939759036", "166", "5", "100", "0", "1", "166", "92106", "91941", "Parachlorella kessleri chloroplast, complete genome", "blastn", "29255", "279", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Trebouxiophyceae", "Chlorellales", "Chlorellaceae", "Parachlorella", "Parachlorella kessleri"], [25375274, "PRJNA613025_S_NODE_7440_length_503_cov_2.636564_g7288_i0", "PRJNA613025", "7440", "503", "2.636564", "13.261916920000001", "Chlorellaceae", "35461", "Plants", "Plants", "78.7", "8.11e-10", "", "NTclustered", "gi|741870561|ref|NC_026009.1|", "3075", "g7288", "i0", "90", "0.74155069582505", "60", "6", "12", "0", "356", "415", "32324", "32383", "Auxenochlorella protothecoides mitochondrion, complete genome", "blastn", "373", "78.7", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Trebouxiophyceae", "Chlorellales", "Chlorellaceae", "Auxenochlorella", "Auxenochlorella protothecoides"]], "truncated": false, "filtered_table_rows_count": 18, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_clade\" = :p2 order by rowid limit 101", "params": {"p0": "blastn", "p1": "PRJNA613025", "p2": "core chlorophytes"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA613025&tax_clade=core+chlorophytes", "results": [{"value": "PRJNA613025", "label": "PRJNA613025", "count": 18, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&tax_clade=core+chlorophytes", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA613025&tax_clade=core+chlorophytes", "results": [{"value": "blastn", "label": "blastn", "count": 18, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA613025&tax_clade=core+chlorophytes", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA613025&tax_clade=core+chlorophytes", "results": [{"value": "Eukaryota", "label": "Eukaryota", "count": 18, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA613025&tax_clade=core+chlorophytes&tax_superkingdom=Eukaryota", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA613025&tax_clade=core+chlorophytes", "results": [{"value": "core chlorophytes", "label": "core chlorophytes", "count": 18, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA613025", "selected": true}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA613025&tax_clade=core+chlorophytes", "results": [{"value": "Viridiplantae", "label": "Viridiplantae", "count": 18, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA613025&tax_clade=core+chlorophytes&tax_kingdom=Viridiplantae", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA613025&tax_clade=core+chlorophytes", "results": [{"value": "Chlorophyta", "label": "Chlorophyta", "count": 18, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA613025&tax_clade=core+chlorophytes&tax_phylum=Chlorophyta", "selected": false}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 369.16626399033703}