{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"blastn\", bioproject = \"PRJNA556992\" and tax_clade = \"Methanomada group\"", "rows": [[1808256, "PRJNA556992_P_NODE_757702_length_248_cov_1.754286_g755513_i0", "PRJNA556992", "757702", "248", "1.754286", "4.35062928", "Methanobrevibacter ruminantium", "83816", "Archaea", "Archaea", "364", "2.539999999999999e-96", "", "NTclustered", "gi|288541968|gb|CP001719.1|", "634498", "g755513", "i0", "93.145", "2", "248", "17", "100", "0", "1", "248", "796162", "796409", "Methanobrevibacter ruminantium M1, complete genome", "blastn", "496", "364", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobrevibacter", "Methanobrevibacter ruminantium"], [1808827, "PRJNA556992_P_NODE_800242_length_246_cov_0.890173_g798052_i0", "PRJNA556992", "800242", "246", "0.890173", "2.18982558", "Methanobrevibacter ruminantium", "83816", "Archaea", "Archaea", "200", "7.5e-47", "", "NTclustered", "gi|288541968|gb|CP001719.1|", "634498", "g798052", "i0", "82.479", "0.951219512195122", "234", "35", "94", "5", "16", "246", "1863966", "1864196", "Methanobrevibacter ruminantium M1, complete genome", "blastn", "234", "200", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobrevibacter", "Methanobrevibacter ruminantium"], [2400519, "PRJNA556992_P_NODE_15442_length_854_cov_10.233035_g13669_i0", "PRJNA556992", "15442", "854", "10.233035", "87.3901189", "Methanobrevibacter", "2172", "Archaea", "Archaea", "1513", "0", "", "NTclustered", "gi|5725307|emb|AJ009958.1|", "66852", "g13669", "i0", "98.822", "106.286885245902", "849", "10", "99", "0", "1", "849", "849", "1", "Methanobrevibacter sp. SM9 16S rRNA gene, partial", "blastn", "90769", "1528", "0.990183246073298", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobrevibacter", "Methanobrevibacter sp."], [4361893, "PRJNA556992_P_NODE_90604_length_417_cov_6.174419_g88421_i0", "PRJNA556992", "90604", "417", "6.174419", "25.74732723", "Methanobrevibacter sp. YE315", "1609968", "Archaea", "Archaea", "684", "0", "", "NTclustered", "gi|985614202|gb|CP010834.1|", "1609968", "g88421", "i0", "96.386", "125.407673860911", "415", "15", "99", "0", "1", "415", "495286", "494872", "Methanobrevibacter sp. YE315, complete genome", "blastn", "52295", "684", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobrevibacter", "Methanobrevibacter sp. YE315"], [6904670, "PRJNA556992_P_NODE_290606_length_290_cov_2.382488_g288417_i0", "PRJNA556992", "290606", "290", "2.382488", "6.9092152", "Methanobrevibacter ruminantium", "83816", "Archaea", "Archaea", "246", "1.1499999999999999e-60", "", "NTclustered", "gi|288541968|gb|CP001719.1|", "634498", "g288417", "i0", "82.734", "0.958620689655172", "278", "46", "96", "2", "14", "290", "891335", "891611", "Methanobrevibacter ruminantium M1, complete genome", "blastn", "278", "246", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobrevibacter", "Methanobrevibacter ruminantium"], [6906758, "PRJNA556992_P_NODE_444926_length_272_cov_2.095477_g442737_i0", "PRJNA556992", "444926", "272", "2.095477", "5.69969744", "Methanobrevibacter ruminantium", "83816", "Archaea", "Archaea", "298", "2.9e-76", "", "NTclustered", "gi|288541968|gb|CP001719.1|", "634498", "g442737", "i0", "86.397", "1", "272", "37", "100", "0", "1", "272", "1814317", "1814588", "Methanobrevibacter ruminantium M1, complete genome", "blastn", "272", "298", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobrevibacter", "Methanobrevibacter ruminantium"], [8178696, "PRJNA556992_P_NODE_236227_length_310_cov_2.902954_g234039_i0", "PRJNA556992", "236227", "310", "2.902954", "8.9991574", "Methanobrevibacter sp. TLL-48-HuF1", "2870563", "Archaea", "Archaea", "121", "7.83e-23", "", "NTclustered", "gi|2246976648|gb|CP081485.1|", "2870563", "g234039", "i0", "92.857", "6.33870967741935", "84", "5", "27", "1", "228", "310", "1288169", "1288086", "Methanobrevibacter sp. TLL-48-HuF1 chromosome, complete genome", "blastn", "1965", "121", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobrevibacter", "Methanobrevibacter sp. TLL-48-HuF1"], [10052762, "PRJNA556992_P_NODE_1048_length_2604_cov_43.693007_g832_i1", "PRJNA556992", "1048", "2604", "43.693007", "1137.76590228", "Methanobrevibacter", "2172", "Archaea", "Archaea", "4117", "0", "", "NTclustered", "gi|470484903|ref|NR_076674.1|", "83816", "g832", "i1", "95.989", "171.376344086022", "2543", "87", "99", "13", "2", "2538", "2539", "6", "Methanobrevibacter ruminantium strain M1 23S ribosomal RNA gene, complete sequence", "blastn", "446264", "4117", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobrevibacter", "Methanobrevibacter ruminantium"], [11330897, "PRJNA556992_P_NODE_872729_length_242_cov_1.810651_g870539_i0", "PRJNA556992", "872729", "242", "1.810651", "4.38177542", "Methanobacterium", "2160", "Archaea", "Archaea", "442", "1.1099999999999995e-119", "", "NTclustered", "gi|1297867845|gb|CP017766.1|", "59277", "g870539", "i0", "99.587", "153.760330578512", "242", "1", "100", "0", "1", "242", "1149041", "1148800", "Methanobacterium subterraneum strain MO-MB1 chromosome, complete genome", "blastn", "37210", "442", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobacterium", "Methanobacterium subterraneum"], [12006759, "PRJNA556992_P_NODE_370850_length_280_cov_1.135266_g368661_i0", "PRJNA556992", "370850", "280", "1.135266", "3.1787448", "Methanobrevibacter ruminantium", "83816", "Archaea", "Archaea", "375", "1.3499999999999995e-99", "", "NTclustered", "gi|288541968|gb|CP001719.1|", "634498", "g368661", "i0", "91.039", "5.49642857142857", "279", "23", "99", "2", "1", "278", "380706", "380983", "Methanobrevibacter ruminantium M1, complete genome", "blastn", "1539", "375", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobrevibacter", "Methanobrevibacter ruminantium"], [16427597, "PRJNA556992_P_NODE_125033_length_378_cov_35.252459_g122846_i0", "PRJNA556992", "125033", "378", "35.252459", "133.25429502", "Methanobrevibacter", "2172", "Archaea", "Archaea", "665", "0", "", "NTclustered", "gi|470484903|ref|NR_076674.1|", "83816", "g122846", "i0", "98.67", "150.769841269841", "376", "4", "99", "1", "3", "378", "2972", "2598", "Methanobrevibacter ruminantium strain M1 23S ribosomal RNA gene, complete sequence", "blastn", "56991", "665", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobrevibacter", "Methanobrevibacter ruminantium"], [17702234, "PRJNA556992_P_NODE_1034_length_2623_cov_49.616863_g832_i0", "PRJNA556992", "1034", "2623", "49.616863", "1301.45031649", "Methanobrevibacter", "2172", "Archaea", "Archaea", "4388", "0", "", "NTclustered", "gi|470484903|ref|NR_076674.1|", "83816", "g832", "i0", "97.658", "171.537933663744", "2562", "49", "99", "7", "67", "2623", "6", "2561", "Methanobrevibacter ruminantium strain M1 23S ribosomal RNA gene, complete sequence", "blastn", "449944", "4388", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobrevibacter", "Methanobrevibacter ruminantium"], [18380562, "PRJNA556992_P_NODE_439895_length_272_cov_8.442211_g437706_i0", "PRJNA556992", "439895", "272", "8.442211", "22.96281392", "Methanobrevibacter sp. YE315", "1609968", "Archaea", "Archaea", "449", "7.57e-122", "", "NTclustered", "gi|985614202|gb|CP010834.1|", "1609968", "g437706", "i0", "96.703", "44.6727941176471", "273", "4", "100", "5", "1", "272", "494841", "494573", "Methanobrevibacter sp. YE315, complete genome", "blastn", "12151", "449", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobrevibacter", "Methanobrevibacter sp. YE315"], [18383772, "PRJNA556992_P_NODE_69295_length_455_cov_8.753927_g67122_i0", "PRJNA556992", "69295", "455", "8.753927", "39.83036785", "Methanobrevibacter sp. YE315", "1609968", "Archaea", "Archaea", "789", "0", "", "NTclustered", "gi|985614202|gb|CP010834.1|", "1609968", "g67122", "i0", "98.022", "164.206593406593", "455", "7", "99", "2", "1", "454", "495740", "496193", "Methanobrevibacter sp. YE315, complete genome", "blastn", "74714", "789", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobrevibacter", "Methanobrevibacter sp. YE315"], [20251955, "PRJNA556992_P_NODE_229956_length_312_cov_1.267782_g227768_i0", "PRJNA556992", "229956", "312", "1.267782", "3.95547984", "root", "1", "Root_unresolved", "Root_unresolved", "58.4", "6.27e-4", "", "NTclustered", "gi|1294447101|gb|CP017803.1|", "2173", "g227768", "i0", "100", "10.0352564102564", "31", "0", "10", "0", "85", "115", "265488", "265518", "Methanobrevibacter smithii strain KB11 chromosome, complete genome", "blastn", "3131", "58.4", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobrevibacter", "Methanobrevibacter smithii"], [20937061, "PRJNA556992_P_NODE_94617_length_412_cov_2.271386_g92433_i0", "PRJNA556992", "94617", "412", "2.271386", "9.35811032", "Methanobrevibacter sp. YE315", "1609968", "Archaea", "Archaea", "693", "0", "", "NTclustered", "gi|985614202|gb|CP010834.1|", "1609968", "g92433", "i0", "97.08", "154.128640776699", "411", "12", "99", "0", "2", "412", "496562", "496152", "Methanobrevibacter sp. YE315, complete genome", "blastn", "63501", "693", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobrevibacter", "Methanobrevibacter sp. YE315"], [21527048, "PRJNA556992_P_NODE_14257_length_887_cov_50.541769_g12530_i0", "PRJNA556992", "14257", "887", "50.541769", "448.30549103", "Methanobrevibacter", "2172", "Archaea", "Archaea", "1618", "0", "", "NTclustered", "gi|5725308|emb|AJ009959.1|", "66852", "g12530", "i0", "99.886", "96.3517474633596", "879", "1", "99", "0", "2", "880", "879", "1", "Methanobrevibacter sp. NT7, 16S rRNA gene, partial", "blastn", "85464", "1620", "0.998765432098765", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobrevibacter", "Methanobrevibacter sp."], [22204159, "PRJNA556992_P_NODE_312698_length_287_cov_1.439252_g310509_i0", "PRJNA556992", "312698", "287", "1.439252", "4.13065324", "Methanobrevibacter olleyae", "294671", "Archaea", "Archaea", "233", "8.829999999999999e-57", "", "NTclustered", "gi|998157363|gb|CP014265.1|", "294671", "g310509", "i0", "81.533", "1", "287", "49", "99", "4", "1", "285", "224227", "223943", "Methanobrevibacter olleyae strain YLM1 chromosome, complete genome", "blastn", "287", "233", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobrevibacter", "Methanobrevibacter olleyae"], [22212438, "PRJNA556992_P_NODE_974738_length_233_cov_2.956250_g972548_i0", "PRJNA556992", "974738", "233", "2.95625", "6.8880625", "Methanobrevibacter millerae", "230361", "Archaea", "Archaea", "425", "1.07e-114", "", "NTclustered", "gi|968564921|gb|CP011266.1|", "230361", "g972548", "i0", "99.571", "140.412017167382", "233", "1", "100", "0", "1", "233", "542024", "542256", "Methanobrevibacter millerae strain SM9, complete genome", "blastn", "32716", "425", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobrevibacter", "Methanobrevibacter millerae"]], "truncated": false, "filtered_table_rows_count": 19, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_clade\" = :p2 order by rowid limit 101", "params": {"p0": "blastn", "p1": "PRJNA556992", "p2": "Methanomada group"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA556992&tax_clade=Methanomada+group", "results": [{"value": "PRJNA556992", "label": "PRJNA556992", "count": 19, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&tax_clade=Methanomada+group", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA556992&tax_clade=Methanomada+group", "results": [{"value": "blastn", "label": "blastn", "count": 19, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA556992&tax_clade=Methanomada+group", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA556992&tax_clade=Methanomada+group", "results": [{"value": "Archaea", "label": "Archaea", "count": 19, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA556992&tax_clade=Methanomada+group&tax_superkingdom=Archaea", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA556992&tax_clade=Methanomada+group", "results": [{"value": "Methanomada group", "label": "Methanomada group", "count": 19, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA556992", "selected": true}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA556992&tax_clade=Methanomada+group", "results": [{"value": "Methanobacteriati", "label": "Methanobacteriati", "count": 19, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA556992&tax_clade=Methanomada+group&tax_kingdom=Methanobacteriati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA556992&tax_clade=Methanomada+group", "results": [{"value": "Methanobacteriota", "label": "Methanobacteriota", "count": 19, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA556992&tax_clade=Methanomada+group&tax_phylum=Methanobacteriota", "selected": false}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 189.68192000465933}