{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"blastn\", bioproject = \"PRJNA550047\" and tax_kingdom = \"Thermoproteati\"", "rows": [[1790389, "PRJNA550047_P_NODE_301002_length_297_cov_7.236607_g299033_i0", "PRJNA550047", "301002", "297", "7.236607", "21.49272279", "Candidatus Nitrosocosmicus oleophilus", "1353260", "Archaea", "Archaea", "315", "3.19e-81", "", "NTclustered", "gi|937513727|gb|CP012850.1|", "1353260", "g299033", "i0", "85.953", "1.00673400673401", "299", "36", "99", "4", "1", "294", "2124246", "2124543", "Candidatus Nitrosocosmicus oleophilus strain MY3, complete genome", "blastn", "299", "315", "1", "Archaea", null, "Thermoproteati", "Nitrososphaerota", "Nitrososphaeria", "Nitrososphaerales", "Nitrososphaeraceae", "Candidatus Nitrosocosmicus", "Candidatus Nitrosocosmicus oleophilus"], [4343425, "PRJNA550047_P_NODE_430964_length_253_cov_11.311111_g428992_i0", "PRJNA550047", "430964", "253", "11.311111", "28.61711083", "Pyrobaculum aerophilum", "13773", "Archaea", "Archaea", "222", "1.65e-53", "", "NTclustered", "gi|18308975|gb|AE009441.1|", "178306", "g428992", "i0", "99.187", "0.486166007905138", "123", "1", "49", "0", "131", "253", "1197078", "1197200", "Pyrobaculum aerophilum str. IM2, complete genome", "blastn", "123", "222", "1", "Archaea", null, "Thermoproteati", "Thermoproteota", "Thermoprotei", "Thermoproteales", "Thermoproteaceae", "Pyrobaculum", "Pyrobaculum aerophilum"], [4345452, "PRJNA550047_P_NODE_596344_length_199_cov_7.865079_g594371_i0", "PRJNA550047", "596344", "199", "7.865079", "15.65150721", "Candidatus Nitrosocosmicus franklandianus", "1798806", "Archaea", "Archaea", "255", "1.23e-63", "", "NTclustered", "gi|1599533355|emb|LR216287.1|", "1798806", "g594371", "i0", "90.674", "51.2361809045226", "193", "17", "97", "1", "1", "193", "1595", "1404", "Candidatus Nitrosocosmicus franklandus isolate NFRAN1 genome assembly, chromosome: NFRAN", "blastn", "10196", "255", "1", "Archaea", null, "Thermoproteati", "Nitrososphaerota", "Nitrososphaeria", "Nitrososphaerales", "Nitrososphaeraceae", "Candidatus Nitrosocosmicus", "Candidatus Nitrosocosmicus franklandianus"], [5617478, "PRJNA550047_P_NODE_206345_length_325_cov_11.980159_g204377_i0", "PRJNA550047", "206345", "325", "11.980159", "38.93551675", "Candidatus Nitrosocosmicus franklandianus", "1798806", "Archaea", "Archaea", "520", "6.969999999999998e-143", "", "NTclustered", "gi|1599533355|emb|LR216287.1|", "1798806", "g204377", "i0", "95.679", "20.0338461538462", "324", "12", "99", "2", "2", "325", "2025", "2346", "Candidatus Nitrosocosmicus franklandus isolate NFRAN1 genome assembly, chromosome: NFRAN", "blastn", "6511", "520", "1", "Archaea", null, "Thermoproteati", "Nitrososphaerota", "Nitrososphaeria", "Nitrososphaerales", "Nitrososphaeraceae", "Candidatus Nitrosocosmicus", "Candidatus Nitrosocosmicus franklandianus"], [10721580, "PRJNA550047_P_NODE_521229_length_223_cov_11.146667_g519256_i0", "PRJNA550047", "521229", "223", "11.146667", "24.85706741", "Pyrobaculum aerophilum", "13773", "Archaea", "Archaea", "377", "2.88e-100", "", "NTclustered", "gi|18308975|gb|AE009441.1|", "178306", "g519256", "i0", "97.309", "1", "223", "5", "100", "1", "1", "223", "1645699", "1645478", "Pyrobaculum aerophilum str. IM2, complete genome", "blastn", "223", "377", "1", "Archaea", null, "Thermoproteati", "Thermoproteota", "Thermoprotei", "Thermoproteales", "Thermoproteaceae", "Pyrobaculum", "Pyrobaculum aerophilum"], [11325060, "PRJNA550047_P_NODE_527389_length_221_cov_9.378378_g525416_i0", "PRJNA550047", "527389", "221", "9.378378", "20.72621538", "Nitrosopumilus", "338191", "Archaea", "Archaea", "89.8", "1.49e-13", "", "NTclustered", "gi|507148339|ref|NR_103142.1|", "338192", "g525416", "i0", "87.342", "34.7737556561086", "79", "8", "36", "2", "85", "163", "514", "438", "Nitrosopumilus maritimus strain SCM1 23S ribosomal RNA gene, complete sequence", "blastn", "7685", "89.8", "1", "Archaea", null, "Thermoproteati", "Nitrososphaerota", "Nitrososphaeria", "Nitrosopumilales", "Nitrosopumilaceae", "Nitrosopumilus", "Nitrosopumilus maritimus"], [16423128, "PRJNA550047_P_NODE_203413_length_337_cov_8.799242_g201451_i0", "PRJNA550047", "203413", "337", "8.799242", "29.65344554", "Archaea", "2157", "Archaea", "Archaea", "595", "1.1699999999999996e-165", "", "NTclustered", "gi|47155798|gb|AY601291.1|", "29281", "g201451", "i0", "98.521", "100.287833827893", "338", "4", "100", "1", "1", "337", "21", "358", "Uncultured crenarchaeote clone GFS3-135i 16S ribosomal RNA gene, partial sequence", "blastn", "33797", "595", "1", "Archaea", null, "Thermoproteati", "Thermoproteota", null, null, null, null, "uncultured crenarchaeote"], [20915661, "PRJNA550047_P_NODE_197837_length_343_cov_13.711111_g195876_i0", "PRJNA550047", "197837", "343", "13.711111", "47.02911073", "Candidatus Nitrososphaera evergladensis", "1459637", "Archaea", "Archaea", "73.1", "2.49e-8", "", "NTclustered", "gi|665992324|gb|CP007174.1|", "1459636", "g195876", "i0", "80.645", "0.556851311953353", "93", "18", "27", "0", "33", "125", "1288267", "1288175", "Candidatus Nitrososphaera evergladensis SR1, complete genome", "blastn", "191", "73.1", "1", "Archaea", null, "Thermoproteati", "Nitrososphaerota", "Nitrososphaeria", "Nitrososphaerales", "Nitrososphaeraceae", "Nitrososphaera", "Candidatus Nitrososphaera evergladensis"], [21524108, "PRJNA550047_P_NODE_539637_length_217_cov_7.861111_g537664_i0", "PRJNA550047", "539637", "217", "7.861111", "17.05861087", "root", "1", "Root_unresolved", "Root_unresolved", "401", "1.6499999999999994e-107", "", "NTclustered", "gi|373125855|gb|JN567036.1|", "29281", "g537664", "i0", "100", "103", "217", "0", "100", "0", "1", "217", "576", "792", "Uncultured crenarchaeote clone DDOUBD11 16S ribosomal RNA gene, partial sequence", "blastn", "22351", "401", "1", "Archaea", null, "Thermoproteati", "Thermoproteota", null, null, null, null, "uncultured crenarchaeote"], [24073077, "PRJNA550047_P_NODE_342899_length_288_cov_4.516279_g340929_i0", "PRJNA550047", "342899", "288", "4.516279", "13.00688352", "Nitrososphaera", "497726", "Archaea", "Archaea", "486", "6.159999999999999e-133", "", "NTclustered", "gi|300521484|gb|GU797787.1|", "497727", "g340929", "i0", "97.213", "103.006944444444", "287", "8", "99", "0", "1", "287", "2135", "1849", "Candidatus Nitrososphaera gargensis 23S ribosomal RNA gene, partial sequence", "blastn", "29666", "486", "1", "Archaea", null, "Thermoproteati", "Nitrososphaerota", "Nitrososphaeria", "Nitrososphaerales", "Nitrososphaeraceae", "Nitrososphaera", "Candidatus Nitrososphaera gargensis"], [25348402, "PRJNA550047_P_NODE_552140_length_213_cov_5.664286_g550167_i0", "PRJNA550047", "552140", "213", "5.664286", "12.06492918", "Thermoproteati", "1783275", "Archaea", "Archaea", "388", "1.26e-103", "", "NTclustered", "gi|153865719|gb|EF450813.1|", "29281", "g550167", "i0", "99.531", "99.9906103286385", "213", "1", "100", "0", "1", "213", "315", "103", "Uncultured crenarchaeote clone CBS16S4-1-17 16S ribosomal RNA gene, partial sequence", "blastn", "21298", "388", "1", "Archaea", null, "Thermoproteati", "Thermoproteota", null, null, null, null, "uncultured crenarchaeote"]], "truncated": false, "filtered_table_rows_count": 11, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_kingdom\" = :p2 order by rowid limit 101", "params": {"p0": "blastn", "p1": "PRJNA550047", "p2": "Thermoproteati"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA550047&tax_kingdom=Thermoproteati", "results": [{"value": "PRJNA550047", "label": "PRJNA550047", "count": 11, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&tax_kingdom=Thermoproteati", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA550047&tax_kingdom=Thermoproteati", "results": [{"value": "blastn", "label": "blastn", "count": 11, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA550047&tax_kingdom=Thermoproteati", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA550047&tax_kingdom=Thermoproteati", "results": [{"value": "Archaea", "label": "Archaea", "count": 11, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA550047&tax_kingdom=Thermoproteati&tax_superkingdom=Archaea", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA550047&tax_kingdom=Thermoproteati", "results": [], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA550047&tax_kingdom=Thermoproteati", "results": [{"value": "Thermoproteati", "label": "Thermoproteati", "count": 11, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA550047", "selected": true}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA550047&tax_kingdom=Thermoproteati", "results": [{"value": "Nitrososphaerota", "label": "Nitrososphaerota", "count": 6, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA550047&tax_kingdom=Thermoproteati&tax_phylum=Nitrososphaerota", "selected": false}, {"value": "Thermoproteota", "label": "Thermoproteota", "count": 5, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA550047&tax_kingdom=Thermoproteati&tax_phylum=Thermoproteota", "selected": false}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 157.6848559998325}