{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"blastn\", bioproject = \"PRJNA493827\" and tax_phylum = \"Gemmatimonadota\"", "rows": [[471643, "PRJNA493827_P_NODE_197001_length_248_cov_2.182857_g194803_i0", "PRJNA493827", "197001", "248", "2.182857", "5.41348536", "uncultured Gemmatimonadales bacterium", "412054", "Bacteria", "Bacteria", "126", "1.2999999999999998e-24", "", "NTclustered", "gi|2874253755|emb|OY969695.1|", "412054", "g194803", "i0", "96.104", "26.4193548387097", "77", "3", "31", "0", "172", "248", "155536", "155460", "MAG: uncultured Gemmatimonadales bacterium isolate MFD04967.bin.1.34 genome assembly, chromosome: 1", "blastn", "6552", "126", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", null, null, "uncultured Gemmatimonadales bacterium"], [4299135, "PRJNA493827_P_NODE_232904_length_241_cov_0.916667_g230706_i0", "PRJNA493827", "232904", "241", "0.916667", "2.20916747", "uncultured Gemmatimonadales bacterium", "412054", "Bacteria", "Bacteria", "396", "8.7e-106", "", "NTclustered", "gi|2874253938|emb|OY970263.1|", "412054", "g230706", "i0", "96.311", "89.8630705394191", "244", "4", "100", "4", "1", "241", "801389", "801630", "MAG: uncultured Gemmatimonadales bacterium isolate MFD02416.bin.2.26 genome assembly, chromosome: 1", "blastn", "21657", "396", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", null, null, "uncultured Gemmatimonadales bacterium"], [6849383, "PRJNA493827_P_NODE_207966_length_246_cov_0.890173_g205768_i0", "PRJNA493827", "207966", "246", "0.890173", "2.18982558", "uncultured Gemmatimonadales bacterium", "412054", "Bacteria", "Bacteria", "239", "1.59e-58", "", "NTclustered", "gi|2874253755|emb|OY969695.1|", "412054", "g205768", "i0", "84.211", "47.8536585365854", "247", "37", "100", "2", "1", "246", "161719", "161964", "MAG: uncultured Gemmatimonadales bacterium isolate MFD04967.bin.1.34 genome assembly, chromosome: 1", "blastn", "11772", "239", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", null, null, "uncultured Gemmatimonadales bacterium"], [6849790, "PRJNA493827_P_NODE_227386_length_242_cov_0.911243_g225188_i0", "PRJNA493827", "227386", "242", "0.911243", "2.20520806", "Gemmatimonas aurantiaca", "173480", "Bacteria", "Bacteria", "448", "2.3799999999999995e-121", "", "NTclustered", "gi|226088597|dbj|AP009153.1|", "379066", "g225188", "i0", "100", "1", "242", "0", "100", "0", "1", "242", "3923489", "3923730", "Gemmatimonas aurantiaca T-27 DNA, complete genome", "blastn", "242", "448", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", "Gemmatimonadaceae", "Gemmatimonas", "Gemmatimonas aurantiaca"], [6851894, "PRJNA493827_P_NODE_93566_length_355_cov_0.804965_g91368_i0", "PRJNA493827", "93566", "355", "0.804965", "2.85762575", "uncultured Gemmatimonadales bacterium", "412054", "Bacteria", "Bacteria", "171", "8.89e-38", "", "NTclustered", "gi|2874253755|emb|OY969695.1|", "412054", "g91368", "i0", "76.638", "11.9295774647887", "351", "57", "99", "12", "6", "355", "156855", "157181", "MAG: uncultured Gemmatimonadales bacterium isolate MFD04967.bin.1.34 genome assembly, chromosome: 1", "blastn", "4235", "171", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", null, null, "uncultured Gemmatimonadales bacterium"], [8123079, "PRJNA493827_P_NODE_124967_length_306_cov_1.008584_g122769_i0", "PRJNA493827", "124967", "306", "1.008584", "3.08626704", "uncultured Gemmatimonadales bacterium", "412054", "Bacteria", "Bacteria", "357", "5.4e-94", "", "NTclustered", "gi|2874253978|emb|OY970303.1|", "412054", "g122769", "i0", "90.545", "89.2843137254902", "275", "19", "89", "7", "1", "271", "1904724", "1904453", "MAG: uncultured Gemmatimonadales bacterium isolate MFD01275.bin.c.12 genome assembly, chromosome: 1", "blastn", "27321", "357", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", null, null, "uncultured Gemmatimonadales bacterium"], [8123275, "PRJNA493827_P_NODE_133987_length_295_cov_1.387387_g131789_i0", "PRJNA493827", "133987", "295", "1.387387", "4.09279165", "uncultured Gemmatimonadales bacterium", "412054", "Bacteria", "Bacteria", "405", "1.82e-108", "", "NTclustered", "gi|2874253938|emb|OY970263.1|", "412054", "g131789", "i0", "91.304", "75.4237288135593", "299", "22", "100", "4", "1", "295", "801159", "801457", "MAG: uncultured Gemmatimonadales bacterium isolate MFD02416.bin.2.26 genome assembly, chromosome: 1", "blastn", "22250", "405", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", null, null, "uncultured Gemmatimonadales bacterium"], [8123785, "PRJNA493827_P_NODE_157227_length_273_cov_1.540000_g155029_i0", "PRJNA493827", "157227", "273", "1.54", "4.2042", "Gemmatimonas groenlandica", "2732249", "Bacteria", "Bacteria", "248", "2.98e-61", "", "NTclustered", "gi|1839994010|gb|CP053085.1|", "2732249", "g155029", "i0", "89", "34.2307692307692", "200", "22", "73", "0", "42", "241", "3685207", "3685008", "Gemmatimonas groenlandica strain TET16 chromosome, complete genome", "blastn", "9345", "248", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", "Gemmatimonadaceae", "Gemmatimonas", "Gemmatimonas groenlandica"], [8125375, "PRJNA493827_P_NODE_232467_length_241_cov_0.916667_g230269_i0", "PRJNA493827", "232467", "241", "0.916667", "2.20916747", "uncultured Gemmatimonadales bacterium", "412054", "Bacteria", "Bacteria", "335", "1.9199999999999993e-87", "", "NTclustered", "gi|2874253728|emb|OY969570.1|", "412054", "g230269", "i0", "91.77", "52.4107883817427", "243", "16", "100", "4", "1", "241", "172936", "172696", "MAG: uncultured Gemmatimonadales bacterium isolate MFD02840.bin.c.1 genome assembly, chromosome: 1", "blastn", "12631", "335", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", null, null, "uncultured Gemmatimonadales bacterium"], [9398402, "PRJNA493827_P_NODE_138768_length_290_cov_1.142857_g136570_i0", "PRJNA493827", "138768", "290", "1.142857", "3.3142853", "Gemmatimonas groenlandica", "2732249", "Bacteria", "Bacteria", "425", "1.37e-114", "", "NTclustered", "gi|1839994010|gb|CP053085.1|", "2732249", "g136570", "i0", "93.151", "662.534482758621", "292", "17", "100", "3", "1", "290", "1103058", "1103348", "Gemmatimonas groenlandica strain TET16 chromosome, complete genome", "blastn", "192135", "425", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", "Gemmatimonadaceae", "Gemmatimonas", "Gemmatimonas groenlandica"], [9399443, "PRJNA493827_P_NODE_188028_length_250_cov_1.740113_g185830_i0", "PRJNA493827", "188028", "250", "1.740113", "4.3502825", "Gemmatimonas groenlandica", "2732249", "Bacteria", "Bacteria", "326", "1.21e-84", "", "NTclustered", "gi|1839994010|gb|CP053085.1|", "2732249", "g185830", "i0", "90.323", "172.16", "248", "24", "99", "0", "3", "250", "1104161", "1104408", "Gemmatimonas groenlandica strain TET16 chromosome, complete genome", "blastn", "43040", "326", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", "Gemmatimonadaceae", "Gemmatimonas", "Gemmatimonas groenlandica"], [11308932, "PRJNA493827_P_NODE_48949_length_511_cov_2.413242_g46759_i0", "PRJNA493827", "48949", "511", "2.413242", "12.33166662", "Gemmatimonas", "173479", "Bacteria", "Bacteria", "715", "0", "", "NTclustered", "gi|470475286|ref|NR_076270.1|", "173480", "g46759", "i0", "91.977", "57.3737769080235", "511", "39", "99", "2", "2", "511", "530", "21", "Gemmatimonas aurantiaca strain T-27 23S ribosomal RNA gene, complete sequence", "blastn", "29318", "721", "0.991678224687933", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", "Gemmatimonadaceae", "Gemmatimonas", "Gemmatimonas aurantiaca"], [23423037, "PRJNA493827_P_NODE_151859_length_278_cov_1.243902_g149661_i0", "PRJNA493827", "151859", "278", "1.243902", "3.45804756", "Pseudogemmatithrix spongiicola", "3062599", "Bacteria", "Bacteria", "396", "1.03e-105", "", "NTclustered", "gi|2557479348|gb|CP130613.1|", "3062599", "g149661", "i0", "92.701", "257.158273381295", "274", "20", "99", "0", "1", "274", "1552747", "1553020", "Pseudogemmatithrix spongiicola strain 318 chromosome, complete genome", "blastn", "71490", "396", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", "Gemmatimonadaceae", "Pseudogemmatithrix", "Pseudogemmatithrix spongiicola"]], "truncated": false, "filtered_table_rows_count": 13, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "blastn", "p1": "PRJNA493827", "p2": "Gemmatimonadota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA493827&tax_phylum=Gemmatimonadota", "results": [{"value": "PRJNA493827", "label": "PRJNA493827", "count": 13, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&tax_phylum=Gemmatimonadota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA493827&tax_phylum=Gemmatimonadota", "results": [{"value": "blastn", "label": "blastn", "count": 13, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA493827&tax_phylum=Gemmatimonadota", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA493827&tax_phylum=Gemmatimonadota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 13, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA493827&tax_phylum=Gemmatimonadota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA493827&tax_phylum=Gemmatimonadota", "results": [{"value": "FCB group", "label": "FCB group", "count": 13, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA493827&tax_phylum=Gemmatimonadota&tax_clade=FCB+group", "selected": false}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA493827&tax_phylum=Gemmatimonadota", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 13, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA493827&tax_phylum=Gemmatimonadota&tax_kingdom=Pseudomonadati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA493827&tax_phylum=Gemmatimonadota", "results": [{"value": "Gemmatimonadota", "label": "Gemmatimonadota", "count": 13, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA493827", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 347.00356800021837}