{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"blastn\", bioproject = \"PRJNA492406\" and tax_clade = \"core chlorophytes\"", "rows": [[4927320, "PRJNA492406_P_NODE_14904_length_324_cov_3.633466_g14605_i0", "PRJNA492406", "14904", "324", "3.633466", "11.77242984", "Eukaryota", "2759", "Plants", "Plants", "577", "4.0599999999999986e-160", "", "NTclustered", "gi|1201359271|gb|MF040793.1|", "3078", "g14605", "i0", "98.765", "93.9938271604938", "324", "4", "100", "0", "1", "324", "406", "83", "Auxenochlorella pyrenoidosa isolate HITH6 18S ribosomal RNA gene, partial sequence", "blastn", "30454", "582", "0.991408934707904", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Trebouxiophyceae", "Chlorellales", "Chlorellaceae", "Auxenochlorella", "Auxenochlorella pyrenoidosa"], [6830141, "PRJNA492406_P_NODE_26906_length_250_cov_2.005650_g26607_i0", "PRJNA492406", "26906", "250", "2.00565", "5.014125", "Chlamydomonas moewusii", "3054", "Plants", "Plants", "93.5", "1.33e-14", "", "NTclustered", "gi|397103|emb|X68913.1|", "3054", "g26607", "i0", "75", "2.772", "224", "44", "88", "10", "29", "248", "927", "712", "Chloroplast C.moewusii rrnL gene, exon 1", "blastn", "693", "93.5", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Chlamydomonadales", "Chlamydomonadaceae", "Chlamydomonas", "Chlamydomonas moewusii"], [9380096, "PRJNA492406_P_NODE_11548_length_365_cov_2.818493_g11249_i0", "PRJNA492406", "11548", "365", "2.818493", "10.28749945", "Trebouxia sp. Jameos_1", "2007186", "Plants", "Plants", "464", "3.75e-126", "", "NTclustered", "gi|1201080600|gb|MF192885.1|", "2007186", "g11249", "i0", "99.222", "90.7753424657534", "257", "2", "70", "0", "109", "365", "803", "547", "Trebouxia sp. Jameos_1 isolate ppJameos_1 large subunit ribosomal RNA gene, partial sequence; chloroplast", "blastn", "33133", "464", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Trebouxiophyceae", "Trebouxiales", "Trebouxiaceae", "Trebouxia", "Trebouxia sp. Jameos_1"], [10656362, "PRJNA492406_P_NODE_30089_length_244_cov_2.438596_g29790_i0", "PRJNA492406", "30089", "244", "2.438596", "5.95017424", "Trebouxia sp. A1-2", "2608996", "Plants", "Plants", "91.6", "4.66e-14", "", "NTclustered", "gi|1825511251|gb|MN642622.1|", "2608996", "g29790", "i0", "88.312", "2.38114754098361", "77", "8", "31", "1", "137", "212", "86129", "86205", "Trebouxia sp. A1-2 mitochondrion, complete genome", "blastn", "581", "91.6", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Trebouxiophyceae", "Trebouxiales", "Trebouxiaceae", "Trebouxia", "Trebouxia sp. A1-2"], [11302497, "PRJNA492406_P_NODE_7049_length_455_cov_1.910995_g6750_i0", "PRJNA492406", "7049", "455", "1.910995", "8.69502725", "Trebouxia", "13786", "Plants", "Plants", "736", "0", "", "NTclustered", "gi|162134340|gb|EU123979.1|", "160068", "g6750", "i0", "95.824", "125.621978021978", "455", "19", "100", "0", "1", "455", "2051", "2505", "Trebouxia aggregata strain SAG 219-1d large subunit ribosomal RNA (rrl) gene, complete sequence; and putative site-specific DNA endonuclease (orf210) and hypothetical protein (orf277) genes, complete cds; chloroplast", "blastn", "57158", "736", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Trebouxiophyceae", "Trebouxiales", "Trebouxiaceae", "Trebouxia", "Trebouxia aggregata"], [13206029, "PRJNA492406_P_NODE_14031_length_334_cov_3.601533_g13732_i0", "PRJNA492406", "14031", "334", "3.601533", "12.02912022", "Chlamydomonas reinhardtii", "3055", "Plants", "Plants", "422", "2.08e-113", "", "NTclustered", "gi|167449|gb|M11448.1|CRETBA2A", "3055", "g13732", "i0", "89.489", "98.7994011976048", "333", "35", "99", "0", "1", "333", "972", "1304", "Chlamydomonas reinhardtii alpha-2 tubulin gene, complete cds", "blastn", "32999", "422", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Chlamydomonadales", "Chlamydomonadaceae", "Chlamydomonas", "Chlamydomonas reinhardtii"], [13852764, "PRJNA492406_P_NODE_10191_length_386_cov_1.476038_g9892_i0", "PRJNA492406", "10191", "386", "1.476038", "5.69750668", "Marvania", "97104", "Plants", "Plants", "137", "9.889999999999999e-28", "", "NTclustered", "gi|2724824493|gb|PP746561.1|", "97105", "g9892", "i0", "79.512", "8.48186528497409", "205", "33", "52", "8", "65", "266", "1484", "1286", "Marvania geminata culture SAG:12.88 mitochondrion, complete genome", "blastn", "3274", "137", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Trebouxiophyceae", "Chlorellales", "Chlorellaceae", "Marvania", "Marvania geminata"], [17029483, "PRJNA492406_P_NODE_11194_length_370_cov_3.683502_g10895_i0", "PRJNA492406", "11194", "370", "3.683502", "13.628957400000001", "Colemanosphaera angeleri", "1454018", "Plants", "Plants", "148", "4.36e-31", "", "NTclustered", "gi|1861679643|gb|MN431475.1|", "1454018", "g10895", "i0", "80.5", "30.8432432432432", "200", "33", "53", "6", "134", "329", "14771", "14968", "Colemanosphaera angeleri strain FACHB-2363 mitochondrion, complete genome", "blastn", "11412", "148", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Chlamydomonadales", "Volvocaceae", "Colemanosphaera", "Colemanosphaera angeleri"], [17029536, "PRJNA492406_P_NODE_13374_length_342_cov_7.985130_g13075_i0", "PRJNA492406", "13374", "342", "7.98513", "27.3091446", "Auxenochlorella protothecoides", "3075", "Plants", "Plants", "130", "1.45e-25", "", "NTclustered", "gi|760445578|ref|XM_011401556.1|", "3075", "g13075", "i0", "88.679", "2.41812865497076", "106", "12", "31", "0", "185", "290", "105", "210", "Auxenochlorella protothecoides 40S ribosomal protein S11 partial mRNA", "blastn", "827", "130", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Trebouxiophyceae", "Chlorellales", "Chlorellaceae", "Auxenochlorella", "Auxenochlorella protothecoides"], [17029966, "PRJNA492406_P_NODE_31914_length_241_cov_0.916667_g31615_i0", "PRJNA492406", "31914", "241", "0.916667", "2.20916747", "Trebouxia lynnae", "1825957", "Plants", "Plants", "385", "1.88e-102", "", "NTclustered", "gi|1812100161|ref|NC_045839.1|", "1825957", "g31615", "i0", "95.436", "84.3651452282158", "241", "11", "100", "0", "1", "241", "179606", "179366", "Trebouxia sp. TR9 chloroplast, partial genome", "blastn", "20332", "385", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Trebouxiophyceae", "Trebouxiales", "Trebouxiaceae", "Trebouxia", "Trebouxia lynnae"], [18304190, "PRJNA492406_P_NODE_26335_length_251_cov_2.438202_g26036_i0", "PRJNA492406", "26335", "251", "2.438202", "6.11988702", "Auxenochlorella pyrenoidosa", "3078", "Plants", "Plants", "435", "1.93e-117", "", "NTclustered", "gi|1201359271|gb|MF040793.1|", "3078", "g26036", "i0", "98.008", "95.0796812749004", "251", "4", "100", "1", "1", "251", "1446", "1695", "Auxenochlorella pyrenoidosa isolate HITH6 18S ribosomal RNA gene, partial sequence", "blastn", "23865", "435", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Trebouxiophyceae", "Chlorellales", "Chlorellaceae", "Auxenochlorella", "Auxenochlorella pyrenoidosa"], [19578196, "PRJNA492406_P_NODE_17016_length_303_cov_1.695652_g16717_i0", "PRJNA492406", "17016", "303", "1.695652", "5.13782556", "uncultured Trebouxia photobiont", "285713", "Plants", "Plants", "87.9", "7.74e-13", "", "NTclustered", "gi|356700925|gb|JN847668.1|", "285713", "g16717", "i0", "87.342", "21.5544554455446", "79", "6", "25", "4", "1", "77", "246", "170", "Uncultured Trebouxia photobiont clone 530R.K5-1-2 16S ribosomal RNA gene, partial sequence; mitochondrial", "blastn", "6531", "87.9", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Trebouxiophyceae", "Trebouxiales", "Trebouxiaceae", "Trebouxia", "uncultured Trebouxia photobiont"], [19578406, "PRJNA492406_P_NODE_26096_length_253_cov_1.311111_g25797_i0", "PRJNA492406", "26096", "253", "1.311111", "3.31711083", "Prototheca ciferrii", "1973153", "Plants", "Plants", "148", "2.8499999999999995e-31", "", "NTclustered", "gi|1381389463|ref|NC_037449.1|", "1973153", "g25797", "i0", "88.525", "38.695652173913", "122", "14", "48", "0", "63", "184", "25221", "25342", "Prototheca zopfii strain SAG 2063 mitochondrion, complete genome", "blastn", "9790", "148", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Trebouxiophyceae", "Chlorellales", "Chlorellaceae", "Prototheca", "Prototheca ciferrii"], [21501230, "PRJNA492406_P_NODE_9377_length_400_cov_10.143731_g9078_i0", "PRJNA492406", "9377", "400", "10.143731", "40.574924", "Eukaryota", "2759", "Plants", "Plants", "706", "0", "", "NTclustered", "gi|1201359271|gb|MF040793.1|", "3078", "g9078", "i0", "98.5", "98.98", "400", "6", "100", "0", "1", "400", "578", "977", "Auxenochlorella pyrenoidosa isolate HITH6 18S ribosomal RNA gene, partial sequence", "blastn", "39592", "712", "0.991573033707865", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Trebouxiophyceae", "Chlorellales", "Chlorellaceae", "Auxenochlorella", "Auxenochlorella pyrenoidosa"], [23404946, "PRJNA492406_P_NODE_31079_length_243_cov_0.905882_g30780_i0", "PRJNA492406", "31079", "243", "0.905882", "2.20129326", "Monoraphidium neglectum", "145388", "Plants", "Plants", "193", "1.24e-44", "", "NTclustered", "gi|926795717|ref|XM_014050538.1|", "145388", "g30780", "i0", "83.178", "25.6543209876543", "214", "32", "87", "3", "24", "235", "70", "281", "Monoraphidium neglectum 40S ribosomal protein S20-1 mRNA", "blastn", "6234", "193", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Sphaeropleales", "Selenastraceae", "Monoraphidium", "Monoraphidium neglectum"]], "truncated": false, "filtered_table_rows_count": 15, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_clade\" = :p2 order by rowid limit 101", "params": {"p0": "blastn", "p1": "PRJNA492406", "p2": "core chlorophytes"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA492406&tax_clade=core+chlorophytes", "results": [{"value": "PRJNA492406", "label": "PRJNA492406", "count": 15, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&tax_clade=core+chlorophytes", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA492406&tax_clade=core+chlorophytes", "results": [{"value": "blastn", "label": "blastn", "count": 15, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA492406&tax_clade=core+chlorophytes", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA492406&tax_clade=core+chlorophytes", "results": [{"value": "Eukaryota", "label": "Eukaryota", "count": 15, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA492406&tax_clade=core+chlorophytes&tax_superkingdom=Eukaryota", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA492406&tax_clade=core+chlorophytes", "results": [{"value": "core chlorophytes", "label": "core chlorophytes", "count": 15, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA492406", "selected": true}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA492406&tax_clade=core+chlorophytes", "results": [{"value": "Viridiplantae", "label": "Viridiplantae", "count": 15, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA492406&tax_clade=core+chlorophytes&tax_kingdom=Viridiplantae", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA492406&tax_clade=core+chlorophytes", "results": [{"value": "Chlorophyta", "label": "Chlorophyta", "count": 15, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA492406&tax_clade=core+chlorophytes&tax_phylum=Chlorophyta", "selected": false}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 165.29257399997732}