{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"blastn\", bioproject = \"PRJNA488043\" and tax_phylum = \"Nitrospirota\"", "rows": [[450057, "PRJNA488043_P_NODE_6781_length_479_cov_2.435556_g4688_i0", "PRJNA488043", "6781", "479", "2.435556", "11.66631324", "Nitrospira sp. KM1", "1936990", "Bacteria", "Bacteria", "298", "5.4299999999999997e-76", "", "NTclustered", "gi|1808878785|dbj|AP022671.1|", "1936990", "g4688", "i0", "86.121", "17.1711899791232", "281", "33", "86", "5", "202", "479", "3399332", "3399055", "Nitrospira sp. KM1 DNA, complete genome", "blastn", "8225", "298", "1", "Bacteria", null, "Pseudomonadati", "Nitrospirota", "Nitrospiria", "Nitrospirales", "Nitrospiraceae", "Nitrospira", "Nitrospira sp. KM1"], [7475927, "PRJNA488043_P_NODE_20626_length_165_cov_4.529412_g18384_i0", "PRJNA488043", "20626", "165", "4.529412", "7.4735298", "Nitrospira", "1234", "Bacteria", "Bacteria", "231", "1.65e-56", "", "NTclustered", "gi|2290907019|gb|CP060499.1|", "70125", "g18384", "i0", "93.038", "82.9757575757576", "158", "11", "96", "0", "6", "163", "2684490", "2684647", "MAG: Nitrospira sp. isolate DH1 chromosome, complete genome", "blastn", "13691", "231", "1", "Bacteria", null, "Pseudomonadati", "Nitrospirota", "Nitrospiria", "Nitrospirales", "Nitrospiraceae", "Nitrospira", "Nitrospira sp."], [9377836, "PRJNA488043_P_NODE_9408_length_359_cov_12.272727_g7178_i0", "PRJNA488043", "9408", "359", "12.272727", "44.05908993", "Nitrospira moscoviensis", "42253", "Bacteria", "Bacteria", "514", "3.61e-141", "", "NTclustered", "gi|922305621|gb|CP011801.1|", "42253", "g7178", "i0", "92.5", "162.16991643454", "360", "25", "100", "2", "1", "359", "1277242", "1277600", "Nitrospira moscoviensis strain NSP M-1, complete genome", "blastn", "58219", "514", "1", "Bacteria", null, "Pseudomonadati", "Nitrospirota", "Nitrospiria", "Nitrospirales", "Nitrospiraceae", "Nitrospira", "Nitrospira moscoviensis"], [14478534, "PRJNA488043_P_NODE_5352_length_568_cov_8.155844_g3405_i0", "PRJNA488043", "5352", "568", "8.155844", "46.32519392", "Nitrospira sp.", "70125", "Bacteria", "Bacteria", "948", "0", "", "NTclustered", "gi|2863125063|dbj|AP038805.1|", "70125", "g3405", "i0", "96.147", "131.140845070423", "571", "19", "100", "1", "1", "568", "2094551", "2093981", "MAG: Nitrospira sp. AFB01 DNA, complete genome", "blastn", "74488", "948", "1", "Bacteria", null, "Pseudomonadati", "Nitrospirota", "Nitrospiria", "Nitrospirales", "Nitrospiraceae", "Nitrospira", "Nitrospira sp."], [15752660, "PRJNA488043_P_NODE_6873_length_473_cov_9.315315_g4771_i0", "PRJNA488043", "6873", "473", "9.315315", "44.06143995", "Nitrospira moscoviensis", "42253", "Bacteria", "Bacteria", "488", "2.9599999999999996e-133", "", "NTclustered", "gi|922305621|gb|CP011801.1|", "42253", "g4771", "i0", "89.086", "142.042283298097", "394", "41", "83", "2", "81", "473", "1277634", "1277242", "Nitrospira moscoviensis strain NSP M-1, complete genome", "blastn", "67186", "488", "1", "Bacteria", null, "Pseudomonadati", "Nitrospirota", "Nitrospiria", "Nitrospirales", "Nitrospiraceae", "Nitrospira", "Nitrospira moscoviensis"], [16400432, "PRJNA488043_P_NODE_13473_length_252_cov_2.636771_g11231_i0", "PRJNA488043", "13473", "252", "2.636771", "6.64466292", "Nitrospira", "1234", "Bacteria", "Bacteria", "294", "3.44e-75", "", "NTclustered", "gi|2863129529|dbj|AP038806.1|", "70125", "g11231", "i0", "98.788", "182.031746031746", "165", "2", "65", "0", "1", "165", "3066337", "3066501", "MAG: Nitrospira sp. NFB02 DNA, complete genome", "blastn", "45872", "294", "1", "Bacteria", null, "Pseudomonadati", "Nitrospirota", "Nitrospiria", "Nitrospirales", "Nitrospiraceae", "Nitrospira", "Nitrospira sp."], [17675569, "PRJNA488043_P_NODE_18734_length_184_cov_39.070968_g16492_i0", "PRJNA488043", "18734", "184", "39.070968", "71.89058112", "Nitrospira", "1234", "Bacteria", "Bacteria", "316", "5.04e-82", "", "NTclustered", "gi|2290907019|gb|CP060499.1|", "70125", "g16492", "i0", "100", "92.6684782608696", "171", "0", "93", "0", "14", "184", "2686944", "2687114", "MAG: Nitrospira sp. isolate DH1 chromosome, complete genome", "blastn", "17051", "316", "1", "Bacteria", null, "Pseudomonadati", "Nitrospirota", "Nitrospiria", "Nitrospirales", "Nitrospiraceae", "Nitrospira", "Nitrospira sp."], [17675575, "PRJNA488043_P_NODE_19454_length_177_cov_3.675676_g17212_i0", "PRJNA488043", "19454", "177", "3.675676", "6.50594652", "Nitrospira", "1234", "Bacteria", "Bacteria", "230", "6.439999999999999e-56", "", "NTclustered", "gi|2511640680|gb|CP126121.1|", "70125", "g17212", "i0", "90.395", "24.045197740113", "177", "14", "99", "3", "1", "175", "883572", "883747", "MAG: Nitrospira sp. isolate bin_001 chromosome, complete genome", "blastn", "4256", "230", "1", "Bacteria", null, "Pseudomonadati", "Nitrospirota", "Nitrospiria", "Nitrospirales", "Nitrospiraceae", "Nitrospira", "Nitrospira sp."], [18949528, "PRJNA488043_P_NODE_7475_length_441_cov_11.781553_g5325_i0", "PRJNA488043", "7475", "441", "11.781553", "51.95664873", "Nitrospira", "1234", "Bacteria", "Bacteria", "671", "0", "", "NTclustered", "gi|2863129529|dbj|AP038806.1|", "70125", "g5325", "i0", "94.104", "128.360544217687", "441", "26", "100", "0", "1", "441", "3063201", "3062761", "MAG: Nitrospira sp. NFB02 DNA, complete genome", "blastn", "56607", "671", "1", "Bacteria", null, "Pseudomonadati", "Nitrospirota", "Nitrospiria", "Nitrospirales", "Nitrospiraceae", "Nitrospira", "Nitrospira sp."], [19575552, "PRJNA488043_P_NODE_11996_length_283_cov_1.535433_g9755_i0", "PRJNA488043", "11996", "283", "1.535433", "4.34527539", "Nitrospira sp.", "70125", "Bacteria", "Bacteria", "204", "6.809999999999998e-48", "", "NTclustered", "gi|2863125063|dbj|AP038805.1|", "70125", "g9755", "i0", "90.909", "5.46643109540636", "154", "11", "54", "3", "131", "283", "732626", "732475", "MAG: Nitrospira sp. AFB01 DNA, complete genome", "blastn", "1547", "204", "1", "Bacteria", null, "Pseudomonadati", "Nitrospirota", "Nitrospiria", "Nitrospirales", "Nitrospiraceae", "Nitrospira", "Nitrospira sp."], [22126223, "PRJNA488043_P_NODE_10838_length_313_cov_4.232394_g8597_i0", "PRJNA488043", "10838", "313", "4.232394", "13.24739322", "Nitrospira sp.", "70125", "Bacteria", "Bacteria", "538", "1.8399999999999993e-148", "", "NTclustered", "gi|2511640680|gb|CP126121.1|", "70125", "g8597", "i0", "97.756", "17.7635782747604", "312", "7", "99", "0", "2", "313", "2738163", "2737852", "MAG: Nitrospira sp. isolate bin_001 chromosome, complete genome", "blastn", "5560", "538", "1", "Bacteria", null, "Pseudomonadati", "Nitrospirota", "Nitrospiria", "Nitrospirales", "Nitrospiraceae", "Nitrospira", "Nitrospira sp."], [23402264, "PRJNA488043_P_NODE_5099_length_589_cov_5.680357_g3186_i0", "PRJNA488043", "5099", "589", "5.680357", "33.45730273", "Nitrospira sp.", "70125", "Bacteria", "Bacteria", "710", "0", "", "NTclustered", "gi|2290907019|gb|CP060499.1|", "70125", "g3186", "i0", "96.092", "382.449915110357", "435", "17", "98", "0", "1", "435", "2683847", "2683413", "MAG: Nitrospira sp. isolate DH1 chromosome, complete genome", "blastn", "225263", "710", "1", "Bacteria", null, "Pseudomonadati", "Nitrospirota", "Nitrospiria", "Nitrospirales", "Nitrospiraceae", "Nitrospira", "Nitrospira sp."]], "truncated": false, "filtered_table_rows_count": 12, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "blastn", "p1": "PRJNA488043", "p2": "Nitrospirota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA488043&tax_phylum=Nitrospirota", "results": [{"value": "PRJNA488043", "label": "PRJNA488043", "count": 12, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&tax_phylum=Nitrospirota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA488043&tax_phylum=Nitrospirota", "results": [{"value": "blastn", "label": "blastn", "count": 12, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA488043&tax_phylum=Nitrospirota", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA488043&tax_phylum=Nitrospirota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 12, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA488043&tax_phylum=Nitrospirota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA488043&tax_phylum=Nitrospirota", "results": [], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA488043&tax_phylum=Nitrospirota", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 12, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA488043&tax_phylum=Nitrospirota&tax_kingdom=Pseudomonadati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA488043&tax_phylum=Nitrospirota", "results": [{"value": "Nitrospirota", "label": "Nitrospirota", "count": 12, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA488043", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 330.8320989999629}