{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"blastn\", bioproject = \"PRJNA453111\" and tax_superkingdom = \"Bacteria\"", "rows": [[2992025, "PRJNA453111_P_NODE_10683_length_249_cov_0.875000_g10591_i0", "PRJNA453111", "10683", "249", "0.875", "2.17875", "Terribium terrae", "2725666", "Bacteria", "Bacteria", "460", "3.16e-125", "", "NTclustered", "gi|1752754875|gb|CP044218.1|", "2725666", "g10591", "i0", "100", "64.6706827309237", "249", "0", "100", "0", "1", "249", "3572184", "3571936", "Mesorhizobium terrae strain NIBRBAC000500504 chromosome, complete genome", "blastn", "16103", "460", "1", "Bacteria", null, "Pseudomonadati", "Pseudomonadota", "Alphaproteobacteria", "Hyphomicrobiales", "Phyllobacteriaceae", "Terribium", "Terribium terrae"], [4268436, "PRJNA453111_P_NODE_13024_length_241_cov_0.916667_g12932_i0", "PRJNA453111", "13024", "241", "0.916667", "2.20916747", "Bradyrhizobium sp. PSBB068", "2715960", "Bacteria", "Bacteria", "446", "8.519999999999999e-121", "", "NTclustered", "gi|1979381481|gb|CP069300.1|", "2715960", "g12932", "i0", "100", "42.7966804979253", "241", "0", "100", "0", "1", "241", "4027655", "4027415", "Bradyrhizobium sp. PSBB068 chromosome, complete genome", "blastn", "10314", "446", "1", "Bacteria", null, "Pseudomonadati", "Pseudomonadota", "Alphaproteobacteria", "Hyphomicrobiales", "Nitrobacteraceae", "Bradyrhizobium", "Bradyrhizobium sp. PSBB068"], [4921033, "PRJNA453111_P_NODE_9424_length_260_cov_1.133690_g9332_i0", "PRJNA453111", "9424", "260", "1.13369", "2.947594", "root", "1", "Root_unresolved", "Root_unresolved", "481", "2.55e-131", "", "NTclustered", "gi|1214359213|gb|MF424753.1|", "1613", "g9332", "i0", "100", "194", "260", "0", "100", "0", "1", "260", "878", "1137", "Limosilactobacillus fermentum strain CAU6386 16S ribosomal RNA gene, partial sequence", "blastn", "50440", "481", "1", "Bacteria", null, "Bacillati", "Bacillota", "Bacilli", "Lactobacillales", "Lactobacillaceae", "Limosilactobacillus", "Limosilactobacillus fermentum"], [5545095, "PRJNA453111_P_NODE_10285_length_250_cov_0.870056_g10193_i0", "PRJNA453111", "10285", "250", "0.870056", "2.17514", "Bradyrhizobium sp. PSBB068", "2715960", "Bacteria", "Bacteria", "462", "8.83e-126", "", "NTclustered", "gi|1979381481|gb|CP069300.1|", "2715960", "g10193", "i0", "100", "97.756", "250", "0", "100", "0", "1", "250", "5136916", "5136667", "Bradyrhizobium sp. PSBB068 chromosome, complete genome", "blastn", "24439", "462", "1", "Bacteria", null, "Pseudomonadati", "Pseudomonadota", "Alphaproteobacteria", "Hyphomicrobiales", "Nitrobacteraceae", "Bradyrhizobium", "Bradyrhizobium sp. PSBB068"], [6195904, "PRJNA453111_P_NODE_665_length_1003_cov_2.348387_g605_i0", "PRJNA453111", "665", "1003", "2.348387", "23.55432161", "Cetobacterium", "180162", "Bacteria", "Bacteria", "1803", "0", "", "NTclustered", "gi|2865368125|gb|CP122294.1|", "188913", "g605", "i0", "99.103", "526.341974077767", "1003", "9", "100", "0", "1", "1003", "278688", "279690", "Cetobacterium somerae strain MSU41 plasmid p41_t2, complete sequence", "blastn", "527921", "1803", "1", "Bacteria", null, "Fusobacteriati", "Fusobacteriota", "Fusobacteriia", "Fusobacteriales", "Fusobacteriaceae", "Cetobacterium", "Cetobacterium somerae"], [8094537, "PRJNA453111_P_NODE_11727_length_246_cov_0.890173_g11635_i0", "PRJNA453111", "11727", "246", "0.890173", "2.18982558", "Streptomyces sp. NBC_00564", "2903663", "Bacteria", "Bacteria", "56.5", "0.002", "", "NTclustered", "gi|2667518664|gb|CP107786.1|", "2903663", "g11635", "i0", "100", "0.121951219512195", "30", "0", "12", "0", "30", "59", "1030285", "1030256", "Streptomyces sp. NBC_00564 strain NBC 00564 chromosome, complete genome", "blastn", "30", "56.5", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Kitasatosporales", "Streptomycetaceae", "Streptomyces", "Streptomyces sp. NBC_00564"], [9369277, "PRJNA453111_P_NODE_12448_length_243_cov_0.905882_g12356_i0", "PRJNA453111", "12448", "243", "0.905882", "2.20129326", "Ralstonia insidiosa", "190721", "Bacteria", "Bacteria", "449", "6.65e-122", "", "NTclustered", "gi|1036241154|gb|CP016023.1|", "190721", "g12356", "i0", "100", "83.8600823045268", "243", "0", "100", "0", "1", "243", "339164", "338922", "Ralstonia insidiosa strain ATCC 49129 chromosome 2, complete sequence", "blastn", "20378", "449", "1", "Bacteria", null, "Pseudomonadati", "Pseudomonadota", "Betaproteobacteria", "Burkholderiales", "Burkholderiaceae", "Ralstonia", "Ralstonia insidiosa"], [10645251, "PRJNA453111_P_NODE_12669_length_242_cov_1.822485_g12577_i0", "PRJNA453111", "12669", "242", "1.822485", "4.4104137", "Pendulispora albinea", "2741071", "Bacteria", "Bacteria", "348", "2.48e-91", "", "NTclustered", "gi|2698035964|gb|CP089984.1|", "2741071", "g12577", "i0", "92.562", "162.900826446281", "242", "18", "100", "0", "1", "242", "3588997", "3589238", "Pendulispora albinea strain MSr11954 chromosome, complete genome", "blastn", "39422", "348", "1", "Bacteria", null, "Pseudomonadati", "Myxococcota", "Myxococcia", "Myxococcales", "Pendulisporaceae", "Pendulispora", "Pendulispora albinea"], [11920196, "PRJNA453111_P_NODE_2350_length_535_cov_16.965368_g2258_i0", "PRJNA453111", "2350", "535", "16.965368", "90.7647188", "Chryseobacterium gallinarum", "1324352", "Bacteria", "Bacteria", "134", "1.82e-26", "", "NTclustered", "gi|1830200908|gb|CP050996.1|", "1324352", "g2258", "i0", "100", "0.65981308411215", "72", "0", "13", "0", "1", "72", "1140", "1069", "Chryseobacterium gallinarum strain FDAARGOS_636 plasmid unnamed2", "blastn", "353", "134", "1", "Bacteria", "FCB group", "Pseudomonadati", "Bacteroidota", "Flavobacteriia", "Flavobacteriales", "Weeksellaceae", "Chryseobacterium", "Chryseobacterium gallinarum"], [11920257, "PRJNA453111_P_NODE_9050_length_267_cov_1.190722_g8958_i0", "PRJNA453111", "9050", "267", "1.190722", "3.17922774", "Kosakonia arachidis", "551989", "Bacteria", "Bacteria", "56.5", "0.002", "", "NTclustered", "gi|1769903668|gb|CP045299.1|", "551989", "g8958", "i0", "96.97", "0.123595505617978", "33", "1", "12", "0", "203", "235", "25488", "25456", "Kosakonia arachidis strain KACC 18508 plasmid unnamed1, complete sequence", "blastn", "33", "56.5", "1", "Bacteria", null, "Pseudomonadati", "Pseudomonadota", "Gammaproteobacteria", "Enterobacterales", "Enterobacteriaceae", "Kosakonia", "Kosakonia arachidis"], [13194969, "PRJNA453111_P_NODE_10151_length_251_cov_0.865169_g10059_i0", "PRJNA453111", "10151", "251", "0.865169", "2.17157419", "Methyloversatilis sp. RAC08", "1842540", "Bacteria", "Bacteria", "414", "2.52e-111", "", "NTclustered", "gi|1059487190|gb|CP016448.1|", "1842540", "g10059", "i0", "96.414", "224.486055776892", "251", "9", "100", "0", "1", "251", "844965", "844715", "Methyloversatilis sp. RAC08 chromosome, complete genome", "blastn", "56346", "414", "1", "Bacteria", null, "Pseudomonadati", "Pseudomonadota", "Betaproteobacteria", "Nitrosomonadales", "Sterolibacteriaceae", "Methyloversatilis", "Methyloversatilis sp. RAC08"], [15120687, "PRJNA453111_P_NODE_7952_length_287_cov_1.065421_g7860_i0", "PRJNA453111", "7952", "287", "1.065421", "3.05775827", "Comamonas", "283", "Bacteria", "Bacteria", "486", "6.139999999999999e-133", "", "NTclustered", "gi|507148303|ref|NR_103106.1|", "285", "g7860", "i0", "97.213", "420.620209059233", "287", "8", "100", "0", "1", "287", "1145", "1431", "Comamonas testosteroni strain CNB-1 23S ribosomal RNA gene, complete sequence", "blastn", "120718", "486", "1", "Bacteria", null, "Pseudomonadati", "Pseudomonadota", "Betaproteobacteria", "Burkholderiales", "Comamonadaceae", "Comamonas", "Comamonas testosteroni"], [16395394, "PRJNA453111_P_NODE_12133_length_244_cov_0.900585_g12041_i0", "PRJNA453111", "12133", "244", "0.900585", "2.1974274", "Pseudonocardiaceae", "2070", "Bacteria", "Bacteria", "407", "4.08e-109", "", "NTclustered", "gi|2667020334|dbj|AP029207.1|", "1933", "g12041", "i0", "97.872", "259.827868852459", "235", "5", "96", "0", "1", "235", "3410", "3176", "Streptoalloteichus tenebrarius JCM 4838 DNA, complete genome", "blastn", "63398", "407", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Pseudonocardiales", "Pseudonocardiaceae", "Streptoalloteichus", "Streptoalloteichus tenebrarius"], [17018717, "PRJNA453111_P_NODE_13334_length_205_cov_11.060606_g13242_i0", "PRJNA453111", "13334", "205", "11.060606", "22.6742423", "Chryseobacterium gallinarum", "1324352", "Bacteria", "Bacteria", "167", "6.129999999999999e-37", "", "NTclustered", "gi|1830200908|gb|CP050996.1|", "1324352", "g13242", "i0", "98.925", "3.28780487804878", "93", "1", "68", "0", "27", "119", "1069", "1161", "Chryseobacterium gallinarum strain FDAARGOS_636 plasmid unnamed2", "blastn", "674", "167", "1", "Bacteria", "FCB group", "Pseudomonadati", "Bacteroidota", "Flavobacteriia", "Flavobacteriales", "Weeksellaceae", "Chryseobacterium", "Chryseobacterium gallinarum"], [17670479, "PRJNA453111_P_NODE_4714_length_372_cov_1.314381_g4622_i0", "PRJNA453111", "4714", "372", "1.314381", "4.88949732", "Lachnospiraceae", "186803", "Bacteria", "Bacteria", "52.8", "0.035", "", "NTclustered", "gi|2813041527|emb|OZ186729.1|", "33038", "g4622", "i0", "100", "0.526881720430108", "28", "0", "8", "0", "24", "51", "2489714", "2489687", "Mediterraneibacter gnavus isolate LUMC_Rgna_QRD035 genome assembly, chromosome: 1", "blastn", "196", "52.8", "1", "Bacteria", null, "Bacillati", "Bacillota", "Clostridia", "Lachnospirales", "Lachnospiraceae", "Mediterraneibacter", "Mediterraneibacter gnavus"], [18293023, "PRJNA453111_P_NODE_11675_length_246_cov_0.890173_g11583_i0", "PRJNA453111", "11675", "246", "0.890173", "2.18982558", "Mixta calida", "665913", "Bacteria", "Bacteria", "52.8", "0.022", "", "NTclustered", "gi|1907656030|gb|CP061511.1|", "665913", "g11583", "i0", "100", "0.227642276422764", "28", "0", "11", "0", "14", "41", "3529897", "3529870", "Mixta calida strain 5098PV chromosome, complete genome", "blastn", "56", "52.8", "1", "Bacteria", null, "Pseudomonadati", "Pseudomonadota", "Gammaproteobacteria", "Enterobacterales", "Erwiniaceae", "Mixta", "Mixta calida"], [23393638, "PRJNA453111_P_NODE_3379_length_442_cov_1.691057_g3287_i0", "PRJNA453111", "3379", "442", "1.691057", "7.47447194", "Clostridium perfringens", "1502", "Bacteria", "Bacteria", "52.8", "0.043", "", "NTclustered", "gi|2100434541|gb|CP075946.1|", "1502", "g3287", "i0", "100", "0.0633484162895928", "28", "0", "6", "0", "54", "81", "34618", "34645", "Clostridium perfringens strain 955/85 plasmid pCP955-85", "blastn", "28", "52.8", "1", "Bacteria", null, "Bacillati", "Bacillota", "Clostridia", "Eubacteriales", "Clostridiaceae", "Clostridium", "Clostridium perfringens"], [23393647, "PRJNA453111_P_NODE_4719_length_372_cov_1.190635_g4627_i0", "PRJNA453111", "4719", "372", "1.190635", "4.4291622", "Mesorhizobium loti", "381", "Bacteria", "Bacteria", "54.7", "0.01", "", "NTclustered", "gi|1050758791|dbj|AP017605.1|", "381", "g4627", "i0", "96.875", "0.161290322580645", "32", "1", "9", "0", "154", "185", "2839721", "2839752", "Mesorhizobium loti DNA, nearly complete genome, strain: TONO", "blastn", "60", "54.7", "1", "Bacteria", null, "Pseudomonadati", "Pseudomonadota", "Alphaproteobacteria", "Hyphomicrobiales", "Phyllobacteriaceae", "Mesorhizobium", "Mesorhizobium loti"], [24044772, "PRJNA453111_P_NODE_9199_length_264_cov_1.905759_g9107_i0", "PRJNA453111", "9199", "264", "1.905759", "5.03120376", "Burkholderia", "32008", "Bacteria", "Bacteria", "82.4", "3.08e-11", "", "NTclustered", "gi|2304481520|gb|CP104215.1|", "28095", "g9107", "i0", "94.34", "35.9090909090909", "53", "3", "20", "0", "17", "69", "1071718", "1071666", "Burkholderia gladioli strain ZN-S4 chromosome 2, complete sequence", "blastn", "9480", "82.4", "1", "Bacteria", null, "Pseudomonadati", "Pseudomonadota", "Betaproteobacteria", "Burkholderiales", "Burkholderiaceae", "Burkholderia", "Burkholderia gladioli"], [24667564, "PRJNA453111_P_NODE_11280_length_247_cov_0.885057_g11188_i0", "PRJNA453111", "11280", "247", "0.885057", "2.18609079", "Helicobacter pylori", "210", "Bacteria", "Bacteria", "54.7", "0.006", "", "NTclustered", "gi|2222110184|gb|CP094161.1|", "210", "g11188", "i0", "100", "0.234817813765182", "29", "0", "12", "0", "173", "201", "1355250", "1355222", "Helicobacter pylori strain Hpfe0015 chromosome, complete genome", "blastn", "58", "54.7", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [24667579, "PRJNA453111_P_NODE_12500_length_243_cov_0.905882_g12408_i0", "PRJNA453111", "12500", "243", "0.905882", "2.20129326", "Aquipseudomonas campi", "2731681", "Bacteria", "Bacteria", "54.7", "0.006", "", "NTclustered", "gi|1876483579|gb|CP053697.2|", "2731681", "g12408", "i0", "96.875", "0.131687242798354", "32", "1", "13", "0", "38", "69", "2709033", "2709002", "Aquipseudomonas campi strain S1-A32-2 chromosome, complete genome", "blastn", "32", "54.7", "1", "Bacteria", null, "Pseudomonadati", "Pseudomonadota", "Gammaproteobacteria", "Pseudomonadales", "Pseudomonadaceae", "Aquipseudomonas", "Aquipseudomonas campi"]], "truncated": false, "filtered_table_rows_count": 21, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_superkingdom\" = :p2 order by rowid limit 101", "params": {"p0": "blastn", "p1": "PRJNA453111", "p2": "Bacteria"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA453111&tax_superkingdom=Bacteria", "results": [{"value": "PRJNA453111", "label": "PRJNA453111", "count": 21, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&tax_superkingdom=Bacteria", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA453111&tax_superkingdom=Bacteria", "results": [{"value": "blastn", "label": "blastn", "count": 21, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA453111&tax_superkingdom=Bacteria", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA453111&tax_superkingdom=Bacteria", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 21, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA453111", "selected": true}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA453111&tax_superkingdom=Bacteria", "results": [{"value": "FCB group", "label": "FCB group", "count": 2, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA453111&tax_superkingdom=Bacteria&tax_clade=FCB+group", "selected": false}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA453111&tax_superkingdom=Bacteria", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 15, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA453111&tax_superkingdom=Bacteria&tax_kingdom=Pseudomonadati", "selected": false}, {"value": "Bacillati", "label": "Bacillati", "count": 5, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA453111&tax_superkingdom=Bacteria&tax_kingdom=Bacillati", "selected": false}, {"value": "Fusobacteriati", "label": "Fusobacteriati", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA453111&tax_superkingdom=Bacteria&tax_kingdom=Fusobacteriati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA453111&tax_superkingdom=Bacteria", "results": [{"value": "Pseudomonadota", "label": "Pseudomonadota", "count": 11, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA453111&tax_superkingdom=Bacteria&tax_phylum=Pseudomonadota", "selected": false}, {"value": "Bacillota", "label": "Bacillota", "count": 3, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA453111&tax_superkingdom=Bacteria&tax_phylum=Bacillota", "selected": false}, {"value": "Actinomycetota", "label": "Actinomycetota", "count": 2, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA453111&tax_superkingdom=Bacteria&tax_phylum=Actinomycetota", "selected": false}, {"value": "Bacteroidota", "label": "Bacteroidota", "count": 2, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA453111&tax_superkingdom=Bacteria&tax_phylum=Bacteroidota", "selected": false}, {"value": "Campylobacterota", "label": "Campylobacterota", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA453111&tax_superkingdom=Bacteria&tax_phylum=Campylobacterota", "selected": false}, {"value": "Fusobacteriota", "label": "Fusobacteriota", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA453111&tax_superkingdom=Bacteria&tax_phylum=Fusobacteriota", "selected": false}, {"value": "Myxococcota", "label": "Myxococcota", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA453111&tax_superkingdom=Bacteria&tax_phylum=Myxococcota", "selected": false}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 143.42680199479219}