{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"blastn\", bioproject = \"PRJNA437204\" and tax_clade = \"core chlorophytes\"", "rows": [[432455, "PRJNA437204_P_NODE_35161_length_338_cov_1.743396_g34862_i0", "PRJNA437204", "35161", "338", "1.743396", "5.89267848", "Coccomyxa subellipsoidea", "248742", "Plants", "Plants", "128", "5.15e-25", "", "NTclustered", "gi|545366316|ref|XM_005648006.1|", "574566", "g34862", "i0", "87.5", "23.2573964497041", "112", "12", "33", "2", "126", "236", "1597", "1487", "Coccomyxa subellipsoidea C-169 putative ABC transporter partial mRNA", "blastn", "7861", "128", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Trebouxiophyceae", null, "Coccomyxaceae", "Coccomyxa", "Coccomyxa subellipsoidea"], [432594, "PRJNA437204_P_NODE_42301_length_318_cov_1.624490_g42002_i0", "PRJNA437204", "42301", "318", "1.62449", "5.1658782", "Volvox carteri", "3067", "Plants", "Plants", "56.5", "0.002", "", "NTclustered", "gi|302830901|ref|XM_002946971.1|", "3068", "g42002", "i0", "96.97", "0.283018867924528", "33", "1", "10", "0", "107", "139", "29", "61", "Volvox carteri f. nagariensis uncharacterized protein (VOLCADRAFT_103245), partial mRNA", "blastn", "90", "56.5", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Chlamydomonadales", "Volvocaceae", "Volvox", "Volvox carteri"], [433524, "PRJNA437204_P_NODE_90721_length_249_cov_0.875000_g90422_i0", "PRJNA437204", "90721", "249", "0.875", "2.17875", "Chlorella variabilis", "554065", "Plants", "Plants", "110", "1.32e-19", "", "NTclustered", "gi|552833980|ref|XM_005848567.1|", "554065", "g90422", "i0", "78.09", "1.61044176706827", "178", "36", "71", "3", "4", "179", "357", "181", "Chlorella variabilis hypothetical protein (CHLNCDRAFT_30648) mRNA, complete cds", "blastn", "401", "110", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Trebouxiophyceae", "Chlorellales", "Chlorellaceae", "Chlorella", "Chlorella variabilis"], [4258618, "PRJNA437204_P_NODE_105984_length_246_cov_0.861272_g105685_i0", "PRJNA437204", "105984", "246", "0.861272", "2.11872912", "Chlamydomonas reinhardtii", "3055", "Plants", "Plants", "148", "2.75e-31", "", "NTclustered", "gi|2082259086|ref|XM_001697336.2|", "3055", "g105685", "i0", "82.927", "17.7723577235772", "164", "28", "67", "0", "83", "246", "528", "365", "Chlamydomonas reinhardtii ribosomal protein S14 (CHLRE_11g480150v5), mRNA", "blastn", "4372", "148", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Chlamydomonadales", "Chlamydomonadaceae", "Chlamydomonas", "Chlamydomonas reinhardtii"], [4917452, "PRJNA437204_P_NODE_11364_length_511_cov_1.216895_g11066_i0", "PRJNA437204", "11364", "511", "1.216895", "6.21833345", "root", "1", "Root_unresolved", "Root_unresolved", "63.9", "2.31e-5", "", "NTclustered", "gi|741870561|ref|NC_026009.1|", "3075", "g11066", "i0", "97.297", "30.6379647749511", "37", "1", "7", "0", "320", "356", "32599", "32563", "Auxenochlorella protothecoides mitochondrion, complete genome", "blastn", "15656", "63.9", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Trebouxiophyceae", "Chlorellales", "Chlorellaceae", "Auxenochlorella", "Auxenochlorella protothecoides"], [6809562, "PRJNA437204_P_NODE_120446_length_242_cov_1.047337_g120147_i0", "PRJNA437204", "120446", "242", "1.047337", "2.53455554", "Chlorella variabilis", "554065", "Plants", "Plants", "56.5", "0.002", "", "NTclustered", "gi|552843247|ref|XM_005850723.1|", "554065", "g120147", "i0", "96.97", "0.136363636363636", "33", "1", "14", "0", "194", "226", "2862", "2830", "Chlorella variabilis hypothetical protein (CHLNCDRAFT_140286) mRNA, complete cds", "blastn", "33", "56.5", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Trebouxiophyceae", "Chlorellales", "Chlorellaceae", "Chlorella", "Chlorella variabilis"], [10636950, "PRJNA437204_P_NODE_64809_length_273_cov_1.190000_g64510_i0", "PRJNA437204", "64809", "273", "1.19", "3.2487", "Chlamydomonas reinhardtii", "3055", "Plants", "Plants", "298", "2.92e-76", "", "NTclustered", "gi|2082250514|ref|XM_001690394.2|", "3055", "g64510", "i0", "87.645", "15.5091575091575", "259", "28", "94", "4", "9", "265", "1372", "1116", "Chlamydomonas reinhardtii uncharacterized protein (CHLRE_07g329700v5), mRNA", "blastn", "4234", "298", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Chlamydomonadales", "Chlamydomonadaceae", "Chlamydomonas", "Chlamydomonas reinhardtii"], [11910794, "PRJNA437204_P_NODE_14630_length_464_cov_1.240409_g14331_i0", "PRJNA437204", "14630", "464", "1.240409", "5.75549776", "Chlorella variabilis", "554065", "Plants", "Plants", "296", "1.89e-75", "", "NTclustered", "gi|552834565|ref|XM_005848699.1|", "554065", "g14331", "i0", "79.391", "25.2564655172414", "427", "82", "91", "6", "41", "464", "522", "99", "Chlorella variabilis hypothetical protein (CHLNCDRAFT_59648) mRNA, complete cds", "blastn", "11719", "296", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Trebouxiophyceae", "Chlorellales", "Chlorellaceae", "Chlorella", "Chlorella variabilis"], [14460789, "PRJNA437204_P_NODE_128452_length_241_cov_0.916667_g128153_i0", "PRJNA437204", "128452", "241", "0.916667", "2.20916747", "Chlamydomonas reinhardtii", "3055", "Plants", "Plants", "52.8", "0.022", "", "NTclustered", "gi|2082235797|ref|XM_043058228.1|", "3055", "g128153", "i0", "100", "0.116182572614108", "28", "0", "12", "0", "185", "212", "369", "342", "Chlamydomonas reinhardtii uncharacterized protein (CHLRE_01g007550v5), mRNA", "blastn", "28", "52.8", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Chlamydomonadales", "Chlamydomonadaceae", "Chlamydomonas", "Chlamydomonas reinhardtii"], [14461844, "PRJNA437204_P_NODE_6772_length_627_cov_2.377256_g6478_i0", "PRJNA437204", "6772", "627", "2.377256", "14.90539512", "Dunaliella salina", "3046", "Plants", "Plants", "272", "4.39e-68", "", "NTclustered", "gi|333691276|gb|JF346104.1|", "3046", "g6478", "i0", "82.188", "19.7846889952153", "320", "53", "51", "4", "27", "344", "527", "844", "Dunaliella salina receptor of activated protein kinase C 1 mRNA, complete cds", "blastn", "12405", "272", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Chlamydomonadales", "Dunaliellaceae", "Dunaliella", "Dunaliella salina"], [14462031, "PRJNA437204_P_NODE_76912_length_254_cov_8.027624_g76613_i0", "PRJNA437204", "76912", "254", "8.027624", "20.39016496", "Monoraphidium neglectum", "145388", "Plants", "Plants", "104", "6.28e-18", "", "NTclustered", "gi|926777351|ref|XM_014041696.1|", "145388", "g76613", "i0", "77.128", "0.740157480314961", "188", "37", "73", "5", "63", "247", "185", "1", "Monoraphidium neglectum 60S ribosomal protein L38 mRNA", "blastn", "188", "104", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Sphaeropleales", "Selenastraceae", "Monoraphidium", "Monoraphidium neglectum"], [15734895, "PRJNA437204_P_NODE_24493_length_382_cov_2.355987_g24194_i0", "PRJNA437204", "24493", "382", "2.355987", "8.99987034", "Polytomella parva", "51329", "Plants", "Plants", "449", "1.11e-121", "", "NTclustered", "gi|1861356407|gb|MT377431.1|", "51329", "g24194", "i0", "87.728", "97.8324607329843", "383", "45", "100", "2", "1", "382", "410", "29", "Polytomella parva clone 0016300141 tubulin alpha chain (TBA) mRNA, complete cds; plastid", "blastn", "37372", "449", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Chlamydomonadales", "Chlamydomonadaceae", "Polytomella", "Polytomella parva"], [18284186, "PRJNA437204_P_NODE_40855_length_322_cov_1.236948_g40556_i0", "PRJNA437204", "40855", "322", "1.236948", "3.98297256", "Monoraphidium neglectum", "145388", "Plants", "Plants", "67.6", "1.08e-6", "", "NTclustered", "gi|926791998|ref|XM_014049019.1|", "145388", "g40556", "i0", "91.667", "4.81987577639752", "48", "4", "15", "0", "9", "56", "1471", "1424", "Monoraphidium neglectum hypothetical protein mRNA", "blastn", "1552", "67.6", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Sphaeropleales", "Selenastraceae", "Monoraphidium", "Monoraphidium neglectum"], [18941248, "PRJNA437204_P_NODE_43535_length_315_cov_1.867769_g43236_i0", "PRJNA437204", "43535", "315", "1.867769", "5.88347235", "Eukaryota", "2759", "Plants", "Plants", "60.2", "1.76e-4", "", "NTclustered", "gi|2082236599|ref|XM_043058554.1|", "3055", "g43236", "i0", "97.143", "12.7714285714286", "35", "1", "11", "0", "157", "191", "361", "327", "Chlamydomonas reinhardtii uncharacterized protein (CHLRE_01g025950v5), mRNA", "blastn", "4023", "60.2", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Chlamydomonadales", "Chlamydomonadaceae", "Chlamydomonas", "Chlamydomonas reinhardtii"], [19559311, "PRJNA437204_P_NODE_83496_length_250_cov_2.581921_g83197_i0", "PRJNA437204", "83496", "250", "2.581921", "6.4548025000000004", "Chlorella variabilis", "554065", "Plants", "Plants", "211", "3.53e-50", "", "NTclustered", "gi|552811974|ref|XM_005843541.1|", "554065", "g83197", "i0", "83.478", "9.988", "230", "34", "91", "4", "9", "236", "797", "1024", "Chlorella variabilis casein protein kinase 2 alpha subunit (CHLNCDRAFT_37369) mRNA, complete cds", "blastn", "2497", "211", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Trebouxiophyceae", "Chlorellales", "Chlorellaceae", "Chlorella", "Chlorella variabilis"], [20833836, "PRJNA437204_P_NODE_19597_length_414_cov_7.686217_g19298_i0", "PRJNA437204", "19597", "414", "7.686217", "31.82093838", "Monoraphidium neglectum", "145388", "Plants", "Plants", "241", "7.91e-59", "", "NTclustered", "gi|926795717|ref|XM_014050538.1|", "145388", "g19298", "i0", "82.9", "62.8719806763285", "269", "44", "65", "2", "40", "307", "357", "90", "Monoraphidium neglectum 40S ribosomal protein S20-1 mRNA", "blastn", "26029", "241", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Sphaeropleales", "Selenastraceae", "Monoraphidium", "Monoraphidium neglectum"], [22109478, "PRJNA437204_P_NODE_56158_length_288_cov_1.153488_g55859_i0", "PRJNA437204", "56158", "288", "1.153488", "3.32204544", "Chlamydomonas reinhardtii", "3055", "Plants", "Plants", "143", "1.54e-29", "", "NTclustered", "gi|2082242458|ref|XM_001703248.2|", "3055", "g55859", "i0", "78.667", "2.68055555555556", "225", "40", "77", "6", "68", "288", "1374", "1154", "Chlamydomonas reinhardtii uncharacterized protein (CHLRE_03g172950v5), mRNA", "blastn", "772", "143", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Chlamydomonadales", "Chlamydomonadaceae", "Chlamydomonas", "Chlamydomonas reinhardtii"], [22110031, "PRJNA437204_P_NODE_84978_length_250_cov_0.870056_g84679_i0", "PRJNA437204", "84978", "250", "0.870056", "2.17514", "Choricystis parasitica", "41300", "Plants", "Plants", "56.5", "0.002", "", "NTclustered", "gi|723446927|ref|NC_025539.1|", "41300", "g84679", "i0", "94.595", "0.148", "37", "0", "15", "1", "11", "47", "68351", "68317", "Choricystis parasitica culture-collection SAG:17.98 chloroplast, complete genome", "blastn", "37", "56.5", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Trebouxiophyceae", null, null, "Choricystis", "Choricystis parasitica"]], "truncated": false, "filtered_table_rows_count": 18, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_clade\" = :p2 order by rowid limit 101", "params": {"p0": "blastn", "p1": "PRJNA437204", "p2": "core chlorophytes"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA437204&tax_clade=core+chlorophytes", "results": [{"value": "PRJNA437204", "label": "PRJNA437204", "count": 18, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&tax_clade=core+chlorophytes", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA437204&tax_clade=core+chlorophytes", "results": [{"value": "blastn", "label": "blastn", "count": 18, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA437204&tax_clade=core+chlorophytes", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA437204&tax_clade=core+chlorophytes", "results": [{"value": "Eukaryota", "label": "Eukaryota", "count": 18, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA437204&tax_clade=core+chlorophytes&tax_superkingdom=Eukaryota", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA437204&tax_clade=core+chlorophytes", "results": [{"value": "core chlorophytes", "label": "core chlorophytes", "count": 18, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA437204", "selected": true}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA437204&tax_clade=core+chlorophytes", "results": [{"value": "Viridiplantae", "label": "Viridiplantae", "count": 18, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA437204&tax_clade=core+chlorophytes&tax_kingdom=Viridiplantae", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA437204&tax_clade=core+chlorophytes", "results": [{"value": "Chlorophyta", "label": "Chlorophyta", "count": 18, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA437204&tax_clade=core+chlorophytes&tax_phylum=Chlorophyta", "selected": false}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 269.5067269996798}