{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"blastn\", bioproject = \"PRJNA414036\" and tax_phylum = \"Nematoda\"", "rows": [[1082932, "PRJNA414036_P_NODE_48221_length_231_cov_2.540816_g46482_i0", "PRJNA414036", "48221", "231", "2.540816", "5.86928496", "Panagrolaimus", "55784", "Nematoda", "Nematoda", "124", "4.31e-24", "", "NTclustered", "gi|1393507003|gb|MH399794.1|", "2211197", "g46482", "i0", "100", "55.5151515151515", "67", "0", "60", "0", "9", "75", "282", "348", "Panagrolaimus sp. B3 ARA-2018 small subunit ribosomal RNA gene, partial sequence", "blastn", "12824", "124", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Rhabditida", "Panagrolaimidae", "Panagrolaimus", "Panagrolaimus sp. B3 ARA-2018"], [6796492, "PRJNA414036_P_NODE_38766_length_236_cov_570.497512_g37027_i0", "PRJNA414036", "38766", "236", "570.497512", "1346.37412832", "Heterodera koreana", "501549", "Nematoda", "Nematoda", "100", "7.45e-17", "", "NTclustered", "gi|164504681|gb|EU306357.1|", "501549", "g37027", "i0", "86.667", "3.09322033898305", "90", "12", "38", "0", "127", "216", "1443", "1354", "Heterodera koreana isolate wb17 18S ribosomal RNA gene, partial sequence", "blastn", "730", "100", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Rhabditida", "Heteroderidae", "Heterodera", "Heterodera koreana"], [7460946, "PRJNA414036_P_NODE_80326_length_162_cov_3.307087_g78587_i0", "PRJNA414036", "80326", "162", "3.307087", "5.35748094", "Metazoa", "33208", "Nematoda", "Nematoda", "161", "2.15e-35", "", "NTclustered", "gi|62082933|gb|AY854224.1|", "320137", "g78587", "i0", "100", "63.2530864197531", "87", "0", "54", "0", "7", "93", "868", "782", "Daptonema normandicum 18S small subunit ribosomal RNA gene, partial sequence", "blastn", "10247", "161", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Monhysterida", "Xyalidae", "Daptonema", "Daptonema normandicum"], [10010978, "PRJNA414036_P_NODE_35628_length_248_cov_10.131455_g33892_i0", "PRJNA414036", "35628", "248", "10.131455", "25.1260084", "Nematoda", "6231", "Nematoda", "Nematoda", "182", "2.74e-41", "", "NTclustered", "gi|482677747|gb|KC522713.1|", "55785", "g33892", "i0", "100", "42.0846774193548", "98", "0", "40", "0", "12", "109", "756", "659", "Panagrolaimus sp. PS1159 small subunit ribosomal RNA gene, complete sequence", "blastn", "10437", "182", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Rhabditida", "Panagrolaimidae", "Panagrolaimus", "Panagrolaimus sp. PS1159"], [13172466, "PRJNA414036_P_NODE_37951_length_239_cov_7.313725_g36212_i0", "PRJNA414036", "37951", "239", "7.313725", "17.47980275", "Panagrolaimus sp. JU1645", "1325423", "Nematoda", "Nematoda", "366", "6.75e-97", "", "NTclustered", "gi|482677736|gb|KC522702.1|", "1325423", "g36212", "i0", "96.818", "80.255230125523", "220", "6", "92", "1", "8", "227", "310", "92", "Panagrolaimus sp. JU1645 large subunit ribosomal RNA gene, partial sequence", "blastn", "19181", "366", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Rhabditida", "Panagrolaimidae", "Panagrolaimus", "Panagrolaimus sp. JU1645"], [15110725, "PRJNA414036_P_NODE_63732_length_202_cov_5.970060_g61993_i0", "PRJNA414036", "63732", "202", "5.97006", "12.0595212", "Panagrolaimus", "55784", "Nematoda", "Nematoda", "171", "4.65e-38", "", "NTclustered", "gi|166014126|gb|EU253569.1|", "55785", "g61993", "i0", "98.947", "15.8316831683168", "95", "1", "72", "0", "10", "104", "1538", "1632", "Panagrolaimus sp. PS1159 28S large subunit ribosomal RNA gene, partial sequence", "blastn", "3198", "171", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Rhabditida", "Panagrolaimidae", "Panagrolaimus", "Panagrolaimus sp. PS1159"], [18270262, "PRJNA414036_P_NODE_13695_length_394_cov_2.395543_g12046_i0", "PRJNA414036", "13695", "394", "2.395543", "9.43843942", "Panagrolaimus sp. ES6", "591446", "Nematoda", "Nematoda", "143", "2.17e-29", "", "NTclustered", "gi|221327465|gb|FJ590996.1|", "591446", "g12046", "i0", "100", "22.2918781725888", "77", "0", "37", "0", "10", "86", "152", "228", "Panagrolaimus sp. ES6 28S ribosomal RNA gene, partial sequence", "blastn", "8783", "143", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Rhabditida", "Panagrolaimidae", "Panagrolaimus", "Panagrolaimus sp. ES6"], [18270375, "PRJNA414036_P_NODE_50415_length_231_cov_2.137755_g48676_i0", "PRJNA414036", "50415", "231", "2.137755", "4.93821405", "Strongyloides papillosus", "174720", "Nematoda", "Nematoda", "63.9", "9.54e-6", "", "NTclustered", "gi|690021544|emb|LM529246.1|", "174720", "g48676", "i0", "100", "0.147186147186147", "34", "0", "15", "0", "10", "43", "430", "463", "Strongyloides papillosus genome assembly S_papillosus_LIN ,scaffold SPAL_contig0003553", "blastn", "34", "63.9", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Rhabditida", "Strongyloididae", "Strongyloides", "Strongyloides papillosus"], [18270468, "PRJNA414036_P_NODE_89475_length_150_cov_1.400000_g87736_i0", "PRJNA414036", "89475", "150", "1.4", "2.1", "Strongyloides papillosus", "174720", "Nematoda", "Nematoda", "58.4", "2.63e-4", "", "NTclustered", "gi|687022708|emb|LM525622.1|", "174720", "g87736", "i0", "97.059", "2.50666666666667", "34", "1", "23", "0", "87", "120", "76086", "76119", "Strongyloides papillosus genome assembly S_papillosus_LIN ,scaffold SPAL_contig0000031", "blastn", "376", "58.4", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Rhabditida", "Strongyloididae", "Strongyloides", "Strongyloides papillosus"], [20209113, "PRJNA414036_P_NODE_42696_length_231_cov_4.147959_g40957_i0", "PRJNA414036", "42696", "231", "4.147959", "9.58178529", "Panagrolaimus", "55784", "Nematoda", "Nematoda", "132", "2.58e-26", "", "NTclustered", "gi|1393507003|gb|MH399794.1|", "2211197", "g40957", "i0", "98.649", "32.3203463203463", "74", "1", "60", "0", "10", "83", "395", "322", "Panagrolaimus sp. B3 ARA-2018 small subunit ribosomal RNA gene, partial sequence", "blastn", "7466", "132", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Rhabditida", "Panagrolaimidae", "Panagrolaimus", "Panagrolaimus sp. B3 ARA-2018"], [22759881, "PRJNA414036_P_NODE_32098_length_264_cov_2.213974_g30362_i0", "PRJNA414036", "32098", "264", "2.213974", "5.84489136", "Opisthokonta", "33154", "Nematoda", "Nematoda", "52.8", "0.024", "", "NTclustered", "gi|339249468|ref|XM_003373674.1|", "6334", "g30362", "i0", "100", "2.14772727272727", "28", "0", "11", "0", "9", "36", "1320", "1293", "Trichinella spiralis putative UBA/TS-N domain protein (Tsp_10709) mRNA, complete cds", "blastn", "567", "52.8", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Enoplea", "Trichinellida", "Trichinellidae", "Trichinella", "Trichinella spiralis"]], "truncated": false, "filtered_table_rows_count": 11, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "blastn", "p1": "PRJNA414036", "p2": "Nematoda"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA414036&tax_phylum=Nematoda", "results": [{"value": "PRJNA414036", "label": "PRJNA414036", "count": 11, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&tax_phylum=Nematoda", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA414036&tax_phylum=Nematoda", "results": [{"value": "blastn", "label": "blastn", "count": 11, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA414036&tax_phylum=Nematoda", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA414036&tax_phylum=Nematoda", "results": [{"value": "Eukaryota", "label": "Eukaryota", "count": 11, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA414036&tax_phylum=Nematoda&tax_superkingdom=Eukaryota", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA414036&tax_phylum=Nematoda", "results": [{"value": "Opisthokonta", "label": "Opisthokonta", "count": 11, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA414036&tax_phylum=Nematoda&tax_clade=Opisthokonta", "selected": false}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA414036&tax_phylum=Nematoda", "results": [{"value": "Metazoa", "label": "Metazoa", "count": 11, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA414036&tax_phylum=Nematoda&tax_kingdom=Metazoa", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA414036&tax_phylum=Nematoda", "results": [{"value": "Nematoda", "label": "Nematoda", "count": 11, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA414036", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 168.35202800029947}