{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"blastn\", bioproject = \"PRJNA384462\" and tax_phylum = \"Chordata\"", "rows": [[405365, "PRJNA384462_S_NODE_8541_length_195_cov_1.047945_g8425_i0", "PRJNA384462", "8541", "195", "1.047945", "2.04349275", "Meleagris gallopavo", "9103", "Chordata", "Chordata", "52.8", "0.017", "", "NTclustered", "gi|2721460874|emb|HG999691.4|", "9103", "g8425", "i0", "100", "0.143589743589744", "28", "0", "14", "0", "127", "154", "2730281", "2730254", "Meleagris gallopavo genome assembly, chromosome: 12", "blastn", "28", "52.8", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Aves", "Galliformes", "Phasianidae", "Meleagris", "Meleagris gallopavo"], [1075817, "PRJNA384462_S_NODE_4581_length_249_cov_1.875000_g4465_i0", "PRJNA384462", "4581", "249", "1.875", "4.66875", "Metazoa", "33208", "Chordata", "Chordata", "233", "7.5e-57", "", "NTclustered", "gi|51774948|dbj|AK174244.1|", "7719", "g4465", "i0", "83.6", "253.582329317269", "250", "39", "100", "2", "1", "249", "1073", "825", "Ciona intestinalis cDNA, clone:cicl008b08, full insert sequence", "blastn", "63142", "233", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Ascidiacea", "Phlebobranchia", "Cionidae", "Ciona", "Ciona intestinalis"], [2956034, "PRJNA384462_S_NODE_83_length_1231_cov_7.811337_g62_i0", "PRJNA384462", "83", "1231", "7.811337", "96.15755847", "Fringilla coelebs", "37598", "Chordata", "Chordata", "60.2", "7.51e-4", "", "NTclustered", "gi|2917610922|emb|OZ228690.1|", "37598", "g62", "i0", "89.362", "0.116165718927701", "47", "5", "4", "0", "671", "717", "5296322", "5296368", "Fringilla coelebs genome assembly, chromosome: Z", "blastn", "143", "60.2", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Aves", "Passeriformes", "Fringillidae", "Fringilla", "Fringilla coelebs"], [2956035, "PRJNA384462_S_NODE_8403_length_196_cov_1.360544_g8287_i0", "PRJNA384462", "8403", "196", "1.360544", "2.66666624", "Varanus komodoensis", "61221", "Chordata", "Chordata", "54.7", "0.005", "", "NTclustered", "gi|2118026107|ref|XM_044450485.1|", "61221", "g8287", "i0", "100", "1.03571428571429", "29", "0", "15", "0", "110", "138", "807", "779", "PREDICTED: Varanus komodoensis pseudopodium enriched atypical kinase 1 (PEAK1), transcript variant X2, mRNA", "blastn", "203", "54.7", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Lepidosauria", "Squamata", "Varanidae", "Varanus", "Varanus komodoensis"], [4232413, "PRJNA384462_S_NODE_10864_length_178_cov_1.472868_g10748_i0", "PRJNA384462", "10864", "178", "1.472868", "2.62170504", "Mauremys mutica", "74926", "Chordata", "Chordata", "54.7", "0.004", "", "NTclustered", "gi|2129506779|ref|XM_045004865.1|", "74926", "g10748", "i0", "94.286", "1.56741573033708", "35", "2", "20", "0", "103", "137", "1668", "1702", "PREDICTED: Mauremys mutica dynein 2 intermediate chain 1 (DYNC2I1), transcript variant X2, mRNA", "blastn", "279", "54.7", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", null, "Testudines", "Geoemydidae", "Mauremys", "Mauremys mutica"], [5509005, "PRJNA384462_S_NODE_13425_length_166_cov_0.863248_g13309_i0", "PRJNA384462", "13425", "166", "0.863248", "1.43299168", "Rattus norvegicus", "10116", "Chordata", "Chordata", "63.9", "6.42e-6", "", "NTclustered", "gi|169118857|gb|AC129986.5|", "10116", "g13309", "i0", "91.489", "1.92168674698795", "47", "2", "28", "2", "96", "142", "126611", "126567", "Rattus norvegicus BAC CH230-317K1 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence", "blastn", "319", "63.9", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Mammalia", "Rodentia", "Muridae", "Rattus", "Rattus norvegicus"], [5509046, "PRJNA384462_S_NODE_6325_length_218_cov_2.112426_g6209_i0", "PRJNA384462", "6325", "218", "2.112426", "4.60508868", "Eublepharis macularius", "481883", "Chordata", "Chordata", "106", "1.46e-18", "", "NTclustered", "gi|2476654345|ref|XM_054970604.1|", "481883", "g6209", "i0", "88.506", "3.70642201834862", "87", "10", "40", "0", "1", "87", "987", "1073", "PREDICTED: Eublepharis macularius protein phosphatase 1 catalytic subunit alpha (PPP1CA), mRNA", "blastn", "808", "106", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Lepidosauria", "Squamata", "Eublepharidae", "Eublepharis", "Eublepharis macularius"], [9333394, "PRJNA384462_S_NODE_15788_length_157_cov_4.148148_g15672_i0", "PRJNA384462", "15788", "157", "4.148148", "6.51259236", "Rana temporaria", "8407", "Chordata", "Chordata", "58.4", "2.78e-4", "", "NTclustered", "gi|2017894458|ref|XM_040321476.1|", "8407", "g15672", "i0", "97.059", "0.43312101910828", "34", "1", "22", "0", "48", "81", "3022", "2989", "PREDICTED: Rana temporaria gastrula zinc finger protein XlCGF17.1-like (LOC120909749), transcript variant X2, mRNA", "blastn", "68", "58.4", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Amphibia", "Anura", "Ranidae", "Rana", "Rana temporaria"], [10003958, "PRJNA384462_S_NODE_12508_length_168_cov_2.571429_g12392_i0", "PRJNA384462", "12508", "168", "2.571429", "4.32000072", "Metazoa", "33208", "Chordata", "Chordata", "52.8", "0.014", "", "NTclustered", "gi|27884987|gb|AC125128.3|", "10090", "g12392", "i0", "100", "0.517857142857143", "28", "0", "17", "0", "124", "151", "555", "582", "Mus musculus BAC clone RP24-289N17 from chromosome 14, complete sequence", "blastn", "87", "52.8", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Mammalia", "Rodentia", "Muridae", "Mus", "Mus musculus"], [10609127, "PRJNA384462_S_NODE_3869_length_268_cov_1.164384_g3753_i0", "PRJNA384462", "3869", "268", "1.164384", "3.12054912", "Mauremys reevesii", "260615", "Chordata", "Chordata", "52.8", "0.025", "", "NTclustered", "gi|1985374593|ref|XM_039539809.1|", "260615", "g3753", "i0", "96.774", "0.115671641791045", "31", "1", "12", "0", "115", "145", "1349", "1319", "PREDICTED: Mauremys reevesii ankyrin repeat domain 37 (ANKRD37), mRNA", "blastn", "31", "52.8", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", null, "Testudines", "Geoemydidae", "Mauremys", "Mauremys reevesii"], [11883999, "PRJNA384462_S_NODE_2130_length_357_cov_5.016234_g2014_i0", "PRJNA384462", "2130", "357", "5.016234", "17.90795538", "Apteryx mantelli", "2696672", "Chordata", "Chordata", "54.7", "0.009", "", "NTclustered", "gi|840016890|emb|LK066393.1|", "202946", "g2014", "i0", "100", "0.0812324929971989", "29", "0", "8", "0", "117", "145", "207577", "207549", "Apteryx australis mantelli genome assembly AptMant0, scaffold scaffold1803", "blastn", "29", "54.7", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Aves", "Apterygiformes", "Apterygidae", "Apteryx", "Apteryx mantelli"], [13159044, "PRJNA384462_S_NODE_1551_length_419_cov_2.259459_g1435_i0", "PRJNA384462", "1551", "419", "2.259459", "9.46713321", "Phascolarctos cinereus", "38626", "Chordata", "Chordata", "52.8", "0.04", "", "NTclustered", "gi|1190415044|ref|XM_021002057.1|", "38626", "g1435", "i0", "100", "0.935560859188544", "28", "0", "7", "0", "217", "244", "4572", "4599", "PREDICTED: Phascolarctos cinereus centrosome and spindle pole associated protein 1 (CSPP1), transcript variant X5, mRNA", "blastn", "392", "52.8", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Mammalia", "Diprotodontia", "Phascolarctidae", "Phascolarctos", "Phascolarctos cinereus"], [13159061, "PRJNA384462_S_NODE_4091_length_262_cov_1.197183_g3975_i0", "PRJNA384462", "4091", "262", "1.197183", "3.13661946", "Cairina moschata", "8855", "Chordata", "Chordata", "52.8", "0.024", "", "NTclustered", "gi|2921976312|gb|CP130421.1|", "8855", "g3975", "i0", "100", "0.106870229007634", "28", "0", "11", "0", "188", "215", "28827624", "28827651", "Cairina moschata breed yongchun chromosome 6", "blastn", "28", "52.8", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Aves", "Anseriformes", "Anatidae", "Cairina", "Cairina moschata"], [13159066, "PRJNA384462_S_NODE_4991_length_240_cov_1.952880_g4875_i0", "PRJNA384462", "4991", "240", "1.95288", "4.686912", "Mus musculus", "10090", "Chordata", "Chordata", "52.8", "0.022", "", "NTclustered", "gi|41351649|gb|AC102503.8|", "10090", "g4875", "i0", "100", "0.116666666666667", "28", "0", "12", "0", "60", "87", "112707", "112734", "Mus musculus chromosome 16, clone RP24-383M8, complete sequence", "blastn", "28", "52.8", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Mammalia", "Rodentia", "Muridae", "Mus", "Mus musculus"], [14434041, "PRJNA384462_S_NODE_15592_length_160_cov_3.576577_g15476_i0", "PRJNA384462", "15592", "160", "3.576577", "5.7225232", "Pristis pectinata", "685728", "Chordata", "Chordata", "52.8", "0.013", "", "NTclustered", "gi|2328989249|ref|XM_052035015.1|", "685728", "g15476", "i0", "100", "0.175", "28", "0", "18", "0", "28", "55", "343", "316", "PREDICTED: Pristis pectinata bcl-2 homologous antagonist/killer-like (LOC127580981), transcript variant X2, mRNA", "blastn", "28", "52.8", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Chondrichthyes", "Rhinopristiformes", "Pristidae", "Pristis", "Pristis pectinata"], [14434046, "PRJNA384462_S_NODE_3192_length_292_cov_1.160494_g3076_i0", "PRJNA384462", "3192", "292", "1.160494", "3.38864248", "Mus musculus", "10090", "Chordata", "Chordata", "52.8", "0.027", "", "NTclustered", "gi|40363342|gb|AC135670.3|", "10090", "g3076", "i0", "100", "0.287671232876712", "28", "0", "10", "0", "62", "89", "153295", "153322", "Mus musculus BAC clone RP23-370D21 from chromosome 19, complete sequence", "blastn", "84", "52.8", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Mammalia", "Rodentia", "Muridae", "Mus", "Mus musculus"], [15708103, "PRJNA384462_S_NODE_93_length_1183_cov_2.888007_g71_i0", "PRJNA384462", "93", "1183", "2.888007", "34.16512281", "Mus musculus", "10090", "Chordata", "Chordata", "62.1", "2e-4", "", "NTclustered", "gi|57470702|gb|AC144813.3|", "10090", "g71", "i0", "100", "0.0278951817413356", "33", "0", "3", "0", "1102", "1134", "37267", "37235", "Mus musculus BAC clone RP24-324I23 from 9, complete sequence", "blastn", "33", "62.1", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Mammalia", "Rodentia", "Muridae", "Mus", "Mus musculus"], [17653441, "PRJNA384462_S_NODE_4794_length_244_cov_12.958974_g4678_i0", "PRJNA384462", "4794", "244", "12.958974", "31.61989656", "Metazoa", "33208", "Chordata", "Chordata", "158", "4.53e-34", "", "NTclustered", "gi|1981790840|ref|XM_039406968.1|", "7725", "g4678", "i0", "91.304", "51.8524590163934", "115", "10", "47", "0", "129", "243", "1300", "1186", "PREDICTED: Styela clava actin, muscle-type (LOC120338943), mRNA", "blastn", "12652", "158", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Ascidiacea", "Stolidobranchia", "Styelidae", "Styela", "Styela clava"], [18256808, "PRJNA384462_S_NODE_10895_length_178_cov_1.186047_g10779_i0", "PRJNA384462", "10895", "178", "1.186047", "2.11116366", "Crotalus tigris", "88082", "Chordata", "Chordata", "67.6", "5.38e-7", "", "NTclustered", "gi|1974221071|ref|XM_039355287.1|", "88082", "g10779", "i0", "79.57", "1.61797752808989", "93", "19", "52", "0", "35", "127", "1309", "1217", "PREDICTED: Crotalus tigris 60S ribosomal protein L3-like (LOC120313388), mRNA", "blastn", "288", "67.6", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Lepidosauria", "Squamata", "Viperidae", "Crotalus", "Crotalus tigris"], [18256849, "PRJNA384462_S_NODE_3555_length_278_cov_1.113537_g3439_i0", "PRJNA384462", "3555", "278", "1.113537", "3.09563286", "Lampetra fluviatilis", "7748", "Chordata", "Chordata", "161", "4.08e-35", "", "NTclustered", "gi|2805714469|emb|OZ078412.1|", "7748", "g3439", "i0", "78.652", "198.41726618705", "267", "39", "97", "17", "21", "278", "14793671", "14793928", "Lampetra fluviatilis genome assembly, chromosome: 9", "blastn", "55160", "161", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Hyperoartia", "Petromyzontiformes", "Petromyzontidae", "Lampetra", "Lampetra fluviatilis"], [18256859, "PRJNA384462_S_NODE_4995_length_240_cov_1.706806_g4879_i0", "PRJNA384462", "4995", "240", "1.706806", "4.0963344", "Mirounga angustirostris", "9716", "Chordata", "Chordata", "52.8", "0.022", "", "NTclustered", "gi|2721827373|ref|XR_010411427.1|", "9716", "g4879", "i0", "100", "0.116666666666667", "28", "0", "12", "0", "27", "54", "8119", "8092", "PREDICTED: Mirounga angustirostris uncharacterized LOC135364406 (LOC135364406), ncRNA", "blastn", "28", "52.8", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Mammalia", "Carnivora", "Phocidae", "Mirounga", "Mirounga angustirostris"], [20806933, "PRJNA384462_S_NODE_6817_length_212_cov_2.355828_g6701_i0", "PRJNA384462", "6817", "212", "2.355828", "4.99435536", "Lacerta agilis", "80427", "Chordata", "Chordata", "52.8", "0.019", "", "NTclustered", "gi|1825686151|ref|XM_033165076.1|", "80427", "g6701", "i0", "100", "0.132075471698113", "28", "0", "13", "0", "82", "109", "1793", "1820", "PREDICTED: Lacerta agilis pre-mRNA processing factor 40 homolog A (PRPF40A), mRNA", "blastn", "28", "52.8", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Lepidosauria", "Squamata", "Lacertidae", "Lacerta", "Lacerta agilis"], [22752730, "PRJNA384462_S_NODE_7978_length_200_cov_1.231788_g7862_i0", "PRJNA384462", "7978", "200", "1.231788", "2.463576", "Metazoa", "33208", "Chordata", "Chordata", "52.8", "0.017", "", "NTclustered", "gi|1621991783|ref|XM_028747829.1|", "64176", "g7862", "i0", "100", "0.56", "28", "0", "14", "0", "8", "35", "1630", "1603", "PREDICTED: Podarcis muralis collagen alpha-1(XXVIII) chain-like (LOC114606055), mRNA", "blastn", "112", "52.8", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Lepidosauria", "Squamata", "Lacertidae", "Podarcis", "Podarcis muralis"], [24027592, "PRJNA384462_S_NODE_2239_length_349_cov_1.680000_g2123_i0", "PRJNA384462", "2239", "349", "1.68", "5.8632", "Metazoa", "33208", "Chordata", "Chordata", "58.4", "7.08e-4", "", "NTclustered", "gi|148231735|ref|NM_001086758.1|", "8355", "g2123", "i0", "100", "8.49283667621776", "31", "0", "9", "0", "98", "128", "1376", "1346", "Xenopus laevis calsequestrin 1 S homeolog (casq1.S), mRNA", "blastn", "2964", "58.4", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Amphibia", "Anura", "Pipidae", "Xenopus", "Xenopus laevis"], [24027599, "PRJNA384462_S_NODE_3439_length_282_cov_1.261803_g3323_i0", "PRJNA384462", "3439", "282", "1.261803", "3.55828446", "Fringillidae", "9133", "Chordata", "Chordata", "52.8", "0.026", "", "NTclustered", "gi|2586345973|ref|XM_059850089.1|", "30427", "g3323", "i0", "100", "0.49645390070922", "28", "0", "10", "0", "236", "263", "4206", "4233", "PREDICTED: Haemorhous mexicanus centrosomal protein 128 (CEP128), transcript variant X2, mRNA", "blastn", "140", "52.8", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Aves", "Passeriformes", "Fringillidae", "Haemorhous", "Haemorhous mexicanus"]], "truncated": false, "filtered_table_rows_count": 25, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "blastn", "p1": "PRJNA384462", "p2": "Chordata"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA384462&tax_phylum=Chordata", "results": [{"value": "PRJNA384462", "label": "PRJNA384462", "count": 25, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&tax_phylum=Chordata", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": 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"Opisthokonta", "label": "Opisthokonta", "count": 25, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA384462&tax_phylum=Chordata&tax_clade=Opisthokonta", "selected": false}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA384462&tax_phylum=Chordata", "results": [{"value": "Metazoa", "label": "Metazoa", "count": 25, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA384462&tax_phylum=Chordata&tax_kingdom=Metazoa", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA384462&tax_phylum=Chordata", "results": [{"value": "Chordata", "label": "Chordata", "count": 25, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA384462", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 238.49417000019457}