{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"blastn\", bioproject = \"PRJNA255848\" and tax_clade = \"PVC group\"", "rows": [[368698, "PRJNA255848_P_NODE_4141_length_553_cov_3.521825_g3837_i0", "PRJNA255848", "4141", "553", "3.521825", "19.47569225", "Prosthecobacter vanneervenii", "48466", "Bacteria", "Bacteria", "933", "0", "", "NTclustered", "gi|12583975|gb|AF245379.1|AF245379", "48466", "g3837", "i0", "97.107", "278.580470162749", "553", "16", "100", "0", "1", "553", "2463", "1911", "Prosthecobacter sp. FC-2 23S ribosomal RNA gene, partial sequence", "blastn", "154055", "933", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", "Verrucomicrobiales", "Verrucomicrobiaceae", "Prosthecobacter", "Prosthecobacter vanneervenii"], [1643575, "PRJNA255848_P_NODE_722_length_1244_cov_4.487029_g578_i0", "PRJNA255848", "722", "1244", "4.487029", "55.81864076", "Prosthecobacter vanneervenii", "48466", "Bacteria", "Bacteria", "1954", "0", "", "NTclustered", "gi|12583975|gb|AF245379.1|AF245379", "48466", "g578", "i0", "95.016", "225.733922829582", "1244", "62", "100", "0", "1", "1244", "338", "1581", "Prosthecobacter sp. FC-2 23S ribosomal RNA gene, partial sequence", "blastn", "280813", "1954", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", "Verrucomicrobiales", "Verrucomicrobiaceae", "Prosthecobacter", "Prosthecobacter vanneervenii"], [6746355, "PRJNA255848_P_NODE_2246_length_757_cov_8.899718_g1994_i0", "PRJNA255848", "2246", "757", "8.899718", "67.37086526", "Limnoglobus roseus", "2598579", "Bacteria", "Bacteria", "1168", "0", "", "NTclustered", "gi|1733446852|gb|CP042425.1|", "2598579", "g1994", "i0", "94.591", "197.095112285337", "758", "35", "100", "4", "1", "757", "2956139", "2956891", "Limnoglobus roseus strain PX52 chromosome, complete genome", "blastn", "149201", "1168", "1", "Bacteria", "PVC group", "Pseudomonadati", "Planctomycetota", "Planctomycetia", "Gemmatales", "Gemmataceae", "Limnoglobus", "Limnoglobus roseus"], [9296651, "PRJNA255848_P_NODE_12608_length_285_cov_6.961864_g12290_i0", "PRJNA255848", "12608", "285", "6.961864", "19.8413124", "Limnoglobus roseus", "2598579", "Bacteria", "Bacteria", "505", "1.6799999999999995e-138", "", "NTclustered", "gi|1733446852|gb|CP042425.1|", "2598579", "g12290", "i0", "98.596", "108.761403508772", "285", "4", "100", "0", "1", "285", "2958882", "2958598", "Limnoglobus roseus strain PX52 chromosome, complete genome", "blastn", "30997", "505", "1", "Bacteria", "PVC group", "Pseudomonadati", "Planctomycetota", "Planctomycetia", "Gemmatales", "Gemmataceae", "Limnoglobus", "Limnoglobus roseus"], [13122435, "PRJNA255848_P_NODE_18991_length_228_cov_1.703911_g18673_i0", "PRJNA255848", "18991", "228", "1.703911", "3.88491708", "Luteolibacter sp.", "1962973", "Bacteria", "Bacteria", "372", "1.37e-98", "", "NTclustered", "gi|2836248208|gb|CP121322.1|", "1962973", "g18673", "i0", "96.053", "273.565789473684", "228", "9", "100", "0", "1", "228", "1008799", "1009026", "MAG: Luteolibacter sp. isolate NCC532_bact_1514 chromosome, complete genome", "blastn", "62373", "372", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", "Verrucomicrobiales", "Verrucomicrobiaceae", "Luteolibacter", "Luteolibacter sp."], [13122578, "PRJNA255848_P_NODE_7491_length_391_cov_7.368421_g7173_i0", "PRJNA255848", "7491", "391", "7.368421", "28.81052611", "Limnoglobus roseus", "2598579", "Bacteria", "Bacteria", "468", "3.13e-127", "", "NTclustered", "gi|1733446852|gb|CP042425.1|", "2598579", "g7173", "i0", "88.601", "142.797953964194", "386", "42", "100", "2", "1", "385", "2956139", "2956523", "Limnoglobus roseus strain PX52 chromosome, complete genome", "blastn", "55834", "468", "1", "Bacteria", "PVC group", "Pseudomonadati", "Planctomycetota", "Planctomycetia", "Gemmatales", "Gemmataceae", "Limnoglobus", "Limnoglobus roseus"], [18220445, "PRJNA255848_P_NODE_7955_length_377_cov_2.268293_g7637_i0", "PRJNA255848", "7955", "377", "2.268293", "8.55146461", "Prosthecobacter fusiformis", "48464", "Bacteria", "Bacteria", "577", "4.789999999999999e-160", "", "NTclustered", "gi|12583974|gb|AF245378.1|AF245378", "48464", "g7637", "i0", "97.904", "231.46949602122", "334", "5", "88", "1", "46", "377", "1562", "1895", "Prosthecobacter fusiformis 23S ribosomal RNA gene, partial sequence", "blastn", "87264", "577", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", "Verrucomicrobiales", "Verrucomicrobiaceae", "Prosthecobacter", "Prosthecobacter fusiformis"], [19494638, "PRJNA255848_P_NODE_44436_length_162_cov_2.867257_g44118_i0", "PRJNA255848", "44436", "162", "2.867257", "4.64495634", "Urbifossiella limnaea", "2528023", "Bacteria", "Bacteria", "291", "2.62e-74", "", "NTclustered", "gi|1712585314|gb|CP036273.1|", "2528023", "g44118", "i0", "99.375", "125.981481481481", "160", "1", "99", "0", "3", "162", "2018965", "2019124", "Urbifossiella limnaea strain ETA_A1 chromosome, complete genome", "blastn", "20409", "291", "1", "Bacteria", "PVC group", "Pseudomonadati", "Planctomycetota", "Planctomycetia", "Gemmatales", "Gemmataceae", "Urbifossiella", "Urbifossiella limnaea"], [20770177, "PRJNA255848_P_NODE_19217_length_227_cov_1.196629_g18899_i0", "PRJNA255848", "19217", "227", "1.196629", "2.71634783", "uncultured Planctomycetaceae bacterium", "100233", "Bacteria", "Bacteria", "329", "8.34e-86", "", "NTclustered", "gi|2874253757|emb|OY969698.1|", "100233", "g18899", "i0", "92.952", "127.290748898678", "227", "15", "100", "1", "1", "227", "4421234", "4421009", "MAG: uncultured Planctomycetaceae bacterium isolate MFD00082.bin.2.56 genome assembly, chromosome: 1", "blastn", "28895", "329", "1", "Bacteria", "PVC group", "Pseudomonadati", "Planctomycetota", "Planctomycetia", "Planctomycetales", "Planctomycetaceae", null, "uncultured Planctomycetaceae bacterium"], [20770225, "PRJNA255848_P_NODE_34877_length_167_cov_1.559322_g34559_i0", "PRJNA255848", "34877", "167", "1.559322", "2.60406774", "Urbifossiella limnaea", "2528023", "Bacteria", "Bacteria", "261", "2.14e-65", "", "NTclustered", "gi|1712585314|gb|CP036273.1|", "2528023", "g34559", "i0", "94.675", "76.2994011976048", "169", "7", "100", "1", "1", "167", "2020065", "2020233", "Urbifossiella limnaea strain ETA_A1 chromosome, complete genome", "blastn", "12742", "261", "1", "Bacteria", "PVC group", "Pseudomonadati", "Planctomycetota", "Planctomycetia", "Gemmatales", "Gemmataceae", "Urbifossiella", "Urbifossiella limnaea"], [22045238, "PRJNA255848_P_NODE_16818_length_243_cov_2.097938_g16500_i0", "PRJNA255848", "16818", "243", "2.097938", "5.09798934", "Urbifossiella limnaea", "2528023", "Bacteria", "Bacteria", "403", "5.25e-108", "", "NTclustered", "gi|1712585314|gb|CP036273.1|", "2528023", "g16500", "i0", "96.694", "223.699588477366", "242", "8", "99", "0", "1", "242", "2018120", "2017879", "Urbifossiella limnaea strain ETA_A1 chromosome, complete genome", "blastn", "54359", "403", "1", "Bacteria", "PVC group", "Pseudomonadati", "Planctomycetota", "Planctomycetia", "Gemmatales", "Gemmataceae", "Urbifossiella", "Urbifossiella limnaea"], [22045259, "PRJNA255848_P_NODE_24638_length_201_cov_1.039474_g24320_i0", "PRJNA255848", "24638", "201", "1.039474", "2.08934274", "Limnoglobus roseus", "2598579", "Bacteria", "Bacteria", "119", "1.7000000000000002e-22", "", "NTclustered", "gi|1733446852|gb|CP042425.1|", "2598579", "g24320", "i0", "80.117", "2.64179104477612", "171", "25", "92", "8", "18", "185", "4089609", "4089445", "Limnoglobus roseus strain PX52 chromosome, complete genome", "blastn", "531", "119", "1", "Bacteria", "PVC group", "Pseudomonadati", "Planctomycetota", "Planctomycetia", "Gemmatales", "Gemmataceae", "Limnoglobus", "Limnoglobus roseus"], [22045271, "PRJNA255848_P_NODE_28178_length_187_cov_3.797101_g27860_i0", "PRJNA255848", "28178", "187", "3.797101", "7.10057887", "Prosthecobacter vanneervenii", "48466", "Bacteria", "Bacteria", "243", "8.85e-60", "", "NTclustered", "gi|12583975|gb|AF245379.1|AF245379", "48466", "g27860", "i0", "92.398", "3.01604278074866", "171", "11", "91", "2", "4", "173", "316", "147", "Prosthecobacter sp. FC-2 23S ribosomal RNA gene, partial sequence", "blastn", "564", "243", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", "Verrucomicrobiales", "Verrucomicrobiaceae", "Prosthecobacter", "Prosthecobacter vanneervenii"], [22045373, "PRJNA255848_P_NODE_8898_length_352_cov_3.006601_g8580_i0", "PRJNA255848", "8898", "352", "3.006601", "10.58323552", "uncultured Gemmataceae bacterium", "1914239", "Bacteria", "Bacteria", "579", "1.2299999999999996e-160", "", "NTclustered", "gi|2874253853|emb|OY969909.1|", "1914239", "g8580", "i0", "96.307", "142.068181818182", "352", "13", "100", "0", "1", "352", "2002343", "2002694", "MAG: uncultured Gemmataceae bacterium isolate MFD01275.bin.c.1 genome assembly, chromosome: 1", "blastn", "50008", "579", "1", "Bacteria", "PVC group", "Pseudomonadati", "Planctomycetota", "Planctomycetia", "Gemmatales", "Gemmataceae", null, "uncultured Gemmataceae bacterium"]], "truncated": false, "filtered_table_rows_count": 14, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_clade\" = :p2 order by rowid limit 101", "params": {"p0": "blastn", "p1": "PRJNA255848", "p2": "PVC group"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA255848&tax_clade=PVC+group", "results": [{"value": "PRJNA255848", "label": "PRJNA255848", "count": 14, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&tax_clade=PVC+group", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA255848&tax_clade=PVC+group", "results": [{"value": "blastn", "label": "blastn", "count": 14, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA255848&tax_clade=PVC+group", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA255848&tax_clade=PVC+group", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 14, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA255848&tax_clade=PVC+group&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA255848&tax_clade=PVC+group", "results": [{"value": "PVC group", "label": "PVC group", "count": 14, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA255848", "selected": true}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA255848&tax_clade=PVC+group", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 14, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA255848&tax_clade=PVC+group&tax_kingdom=Pseudomonadati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA255848&tax_clade=PVC+group", "results": [{"value": "Planctomycetota", "label": "Planctomycetota", "count": 9, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA255848&tax_clade=PVC+group&tax_phylum=Planctomycetota", "selected": false}, {"value": "Verrucomicrobiota", "label": "Verrucomicrobiota", "count": 5, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA255848&tax_clade=PVC+group&tax_phylum=Verrucomicrobiota", "selected": false}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 226.33441899961326}