{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"blastn\", bioproject = \"PRJNA188516\" and tax_phylum = \"Chordata\"", "rows": [[1640585, "PRJNA188516_P_NODE_4102_length_169_cov_0.866667_g4052_i0", "PRJNA188516", "4102", "169", "0.866667", "1.46466723", "Sitta europaea", "50251", "Chordata", "Chordata", "52.8", "0.014", "", "NTclustered", "gi|2917598300|emb|OZ228662.1|", "50251", "g4052", "i0", "100", "0.331360946745562", "28", "0", "17", "0", "6", "33", "27061412", "27061385", "Sitta europaea genome assembly, chromosome: 8", "blastn", "56", "52.8", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Aves", "Passeriformes", "Sittidae", "Sitta", "Sitta europaea"], [2916488, "PRJNA188516_P_NODE_4583_length_167_cov_0.881356_g4533_i0", "PRJNA188516", "4583", "167", "0.881356", "1.47186452", "Anser cygnoides", "8845", "Chordata", "Chordata", "80.5", "6.43e-11", "", "NTclustered", "gi|2782202122|ref|XM_048057220.2|", "8845", "g4533", "i0", "88.06", "4.94011976047904", "67", "8", "40", "0", "2", "68", "319", "253", "PREDICTED: Anser cygnoides ribosomal protein S14 (RPS14), mRNA", "blastn", "825", "80.5", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Aves", "Anseriformes", "Anatidae", "Anser", "Anser cygnoides"], [3605663, "PRJNA188516_P_NODE_5563_length_164_cov_0.904348_g5513_i0", "PRJNA188516", "5563", "164", "0.904348", "1.48313072", "Metazoa", "33208", "Chordata", "Chordata", "154", "3.65e-33", "", "NTclustered", "gi|2562894275|ref|XM_058858150.1|", "48891", "g5513", "i0", "84.277", "91.140243902439", "159", "23", "96", "2", "7", "164", "335", "178", "PREDICTED: Poecile atricapillus ribosomal protein L23 (RPL23), mRNA", "blastn", "14947", "154", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Aves", "Passeriformes", "Paridae", "Poecile", "Poecile atricapillus"], [5469164, "PRJNA188516_P_NODE_5205_length_165_cov_0.896552_g5155_i0", "PRJNA188516", "5205", "165", "0.896552", "1.4793108", "Bos indicus", "9915", "Chordata", "Chordata", "178", "2.18e-40", "", "NTclustered", "gi|2878369567|ref|XR_011569285.1|", "9915", "g5155", "i0", "93.388", "212.557575757576", "121", "6", "72", "2", "47", "165", "5201", "5081", "PREDICTED: Bos indicus uncharacterized lncRNA (LOC109566173), ncRNA", "blastn", "35072", "178", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Mammalia", "Artiodactyla", "Bovidae", "Bos", "Bos indicus"], [9293916, "PRJNA188516_P_NODE_5248_length_165_cov_0.896552_g5198_i0", "PRJNA188516", "5248", "165", "0.896552", "1.4793108", "Mus musculus", "10090", "Chordata", "Chordata", "305", "9.59e-79", "", "NTclustered", "gi|26082301|dbj|AK031387.1|", "10090", "g5198", "i0", "100", "108.333333333333", "165", "0", "100", "0", "1", "165", "2112", "2276", "Mus musculus 13 days embryo male testis cDNA, RIKEN full-length enriched library, clone:6030421A03 product:U3B small nuclear RNA 4, full insert sequence", "blastn", "17875", "305", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Mammalia", "Rodentia", "Muridae", "Mus", "Mus musculus"], [9293923, "PRJNA188516_P_NODE_588_length_513_cov_201.730603_g538_i0", "PRJNA188516", "588", "513", "201.730603", "1034.87799339", "Mus musculus", "10090", "Chordata", "Chordata", "922", "0", "", "NTclustered", "gi|13517973|gb|AF346627.1|AF346627", "10090", "g538", "i0", "100", "97.3898635477583", "499", "0", "97", "0", "14", "512", "182", "680", "Mus musculus epithelial membrane protein 2 (Emp2) mRNA, complete cds", "blastn", "49961", "922", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Mammalia", "Rodentia", "Muridae", "Mus", "Mus musculus"], [9293940, "PRJNA188516_P_NODE_948_length_391_cov_1.786550_g898_i0", "PRJNA188516", "948", "391", "1.78655", "6.9854105", "Mus musculus", "10090", "Chordata", "Chordata", "593", "4.949999999999998e-165", "", "NTclustered", "gi|2548330513|gb|OQ915115.1|", "10090", "g898", "i0", "94.192", "81.1764705882353", "396", "11", "100", "9", "1", "391", "4680", "5068", "Mus musculus clone BAC JH_40 45S ribosomal RNA and 18S ribosomal RNA genes, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, 28S ribosomal RNA gene, 3' and 5' external transcribed spacers, complete sequence; and 18S ribosomal RNA gene, partial sequence", "blastn", "31740", "593", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Mammalia", "Rodentia", "Muridae", "Mus", "Mus musculus"], [10569907, "PRJNA188516_P_NODE_5409_length_164_cov_0.904348_g5359_i0", "PRJNA188516", "5409", "164", "0.904348", "1.48313072", "Myotis daubentonii", "98922", "Chordata", "Chordata", "75", "2.92e-9", "", "NTclustered", "gi|2579778429|ref|XR_009449993.1|", "98922", "g5359", "i0", "84.81", "15.8231707317073", "79", "7", "46", "4", "1", "76", "16", "92", "PREDICTED: Myotis daubentonii U2 spliceosomal RNA (LOC132221445), ncRNA", "blastn", "2595", "75", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Mammalia", "Chiroptera", "Vespertilionidae", "Myotis", "Myotis daubentonii"], [11844399, "PRJNA188516_P_NODE_5410_length_164_cov_0.904348_g5360_i0", "PRJNA188516", "5410", "164", "0.904348", "1.48313072", "Cavia porcellus", "10141", "Chordata", "Chordata", "303", "3.42e-78", "", "NTclustered", "gi|2687740325|ref|XM_005005322.4|", "10141", "g5360", "i0", "100", "97.640243902439", "164", "0", "100", "0", "1", "164", "843", "680", "PREDICTED: Cavia porcellus prosaposin (Psap), transcript variant X4, mRNA", "blastn", "16013", "303", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Mammalia", "Rodentia", "Caviidae", "Cavia", "Cavia porcellus"], [13119614, "PRJNA188516_P_NODE_5131_length_165_cov_0.896552_g5081_i0", "PRJNA188516", "5131", "165", "0.896552", "1.4793108", "Sus scrofa", "9823", "Chordata", "Chordata", "137", "3.7e-28", "", "NTclustered", "gi|237945933|emb|CU207382.5|", "9823", "g5081", "i0", "98.701", "59.7575757575758", "77", "1", "47", "0", "89", "165", "52421", "52497", "Pig DNA sequence from clone CH242-409K13 on chromosome X, complete sequence", "blastn", "9860", "137", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Mammalia", "Artiodactyla", "Suidae", "Sus", "Sus scrofa"], [14394933, "PRJNA188516_P_NODE_6112_length_162_cov_0.920354_g6062_i0", "PRJNA188516", "6112", "162", "0.920354", "1.49097348", "Xenopus tropicalis", "8364", "Chordata", "Chordata", "283", "4.39e-72", "", "NTclustered", "gi|51895800|gb|BC080974.1|", "8364", "g6062", "i0", "98.148", "99.8888888888889", "162", "3", "100", "0", "1", "162", "1211", "1050", "Xenopus tropicalis hypothetical LOC493206, mRNA (cDNA clone IMAGE:6984500), partial cds", "blastn", "16182", "283", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Amphibia", "Anura", "Pipidae", "Xenopus", "Xenopus tropicalis"], [15668593, "PRJNA188516_P_NODE_3173_length_191_cov_1.443662_g3123_i0", "PRJNA188516", "3173", "191", "1.443662", "2.75739442", "Mus musculus", "10090", "Chordata", "Chordata", "315", "1.9e-81", "", "NTclustered", "gi|74190022|dbj|AK141268.1|", "10090", "g3123", "i0", "100", "31.4764397905759", "170", "0", "89", "0", "1", "170", "348", "179", "Mus musculus 7 days embryo whole body cDNA, RIKEN full-length enriched library, clone:C430011C24 product:tumor necrosis factor (ligand) superfamily, member 6, full insert sequence", "blastn", "6012", "315", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Mammalia", "Rodentia", "Muridae", "Mus", "Mus musculus"], [22731959, "PRJNA188516_P_NODE_3958_length_170_cov_1.231405_g3908_i0", "PRJNA188516", "3958", "170", "1.231405", "2.0933885", "Apteryx", "8821", "Chordata", "Chordata", "147", "6.339999999999999e-31", "", "NTclustered", "gi|1444534300|ref|XM_026088147.1|", "308060", "g3908", "i0", "82.738", "7.47647058823529", "168", "25", "98", "2", "4", "169", "533", "698", "PREDICTED: Apteryx rowi casein kinase II subunit alpha-like (LOC112976673), transcript variant X1, mRNA", "blastn", "1271", "147", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Aves", "Apterygiformes", "Apterygidae", "Apteryx", "Apteryx rowi"]], "truncated": false, "filtered_table_rows_count": 13, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "blastn", "p1": "PRJNA188516", "p2": "Chordata"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA188516&tax_phylum=Chordata", "results": [{"value": "PRJNA188516", "label": "PRJNA188516", "count": 13, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&tax_phylum=Chordata", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA188516&tax_phylum=Chordata", "results": [{"value": "blastn", "label": "blastn", "count": 13, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA188516&tax_phylum=Chordata", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA188516&tax_phylum=Chordata", "results": [{"value": "Eukaryota", "label": "Eukaryota", "count": 13, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA188516&tax_phylum=Chordata&tax_superkingdom=Eukaryota", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA188516&tax_phylum=Chordata", "results": [{"value": "Opisthokonta", "label": "Opisthokonta", "count": 13, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA188516&tax_phylum=Chordata&tax_clade=Opisthokonta", "selected": false}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA188516&tax_phylum=Chordata", "results": [{"value": "Metazoa", "label": "Metazoa", "count": 13, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA188516&tax_phylum=Chordata&tax_kingdom=Metazoa", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA188516&tax_phylum=Chordata", "results": [{"value": "Chordata", "label": "Chordata", "count": 13, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA188516", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 294.0534880035557}