{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"blastn\", bioproject = \"PRJNA1253698\" and tax_clade = \"PVC group\"", "rows": [[359526, "PRJNA1253698_S_NODE_12121_length_200_cov_1.026490_g11755_i0", "PRJNA1253698", "12121", "200", "1.02649", "2.05298", "Congregicoccus parvus", "3081749", "Bacteria", "Bacteria", "368", "1.52e-97", "", "NTclustered", "gi|2599616993|dbj|AP028972.1|", "3081749", "g11755", "i0", "100", "119.575", "199", "0", "99", "0", "2", "200", "1304862", "1304664", "Opitutales bacterium ASA1 DNA, complete genome", "blastn", "23915", "368", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Opitutia", "Opitutales", "Alterococcaceae", "Congregicoccus", "Congregicoccus parvus"], [359580, "PRJNA1253698_S_NODE_3241_length_388_cov_2.097345_g2876_i0", "PRJNA1253698", "3241", "388", "2.097345", "8.1376986", "Candidatus Protochlamydia naegleriophila", "389348", "Bacteria", "Bacteria", "438", "2.429999999999999e-118", "", "NTclustered", "gi|971146634|emb|LN879502.1|", "389348", "g2876", "i0", "88.714", "78.4072164948454", "381", "13", "98", "15", "7", "386", "1250514", "1250163", "Protochlamydia naegleriophila genome assembly PNK1, chromosome : cPNK", "blastn", "30422", "438", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Parachlamydiaceae", "Candidatus Protochlamydia", "Candidatus Protochlamydia naegleriophila"], [1052810, "PRJNA1253698_S_NODE_22261_length_163_cov_1.359649_g21895_i0", "PRJNA1253698", "22261", "163", "1.359649", "2.21622787", "Planctomycetia", "203683", "Bacteria", "Bacteria", "235", "1.26e-57", "", "NTclustered", "gi|1133581311|gb|CP019082.1|", "1387353", "g21895", "i0", "93.21", "42.8773006134969", "162", "8", "99", "2", "3", "163", "122582", "122741", "Paludisphaera borealis strain PX4 chromosome, complete genome", "blastn", "6989", "237", "0.991561181434599", "Bacteria", "PVC group", "Pseudomonadati", "Planctomycetota", "Planctomycetia", "Isosphaerales", "Isosphaeraceae", "Paludisphaera", "Paludisphaera borealis"], [1634425, "PRJNA1253698_S_NODE_17802_length_169_cov_1.275000_g17436_i0", "PRJNA1253698", "17802", "169", "1.275", "2.15475", "Opitutus sp. VeGlc2", "134634", "Bacteria", "Bacteria", "272", "9.95e-69", "", "NTclustered", "gi|164510706|emb|AJ966885.1|", "134634", "g17436", "i0", "95.833", "15.0769230769231", "168", "7", "99", "0", "1", "168", "2253", "2420", "Opitutus sp. VeGlc2 16S rRNA gene (partial), 23S rRNA gene, tRNA-Ala gene, tRNA-Ile gene, ITS1 and ITS2, strain DSM 11246", "blastn", "2548", "272", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Opitutia", "Opitutales", "Opitutaceae", "Opitutus", "Opitutus sp. VeGlc2"], [3603164, "PRJNA1253698_S_NODE_11943_length_201_cov_1.539474_g11577_i0", "PRJNA1253698", "11943", "201", "1.539474", "3.09434274", "Parachlamydia", "83551", "Bacteria", "Bacteria", "311", "2.61e-80", "", "NTclustered", "gi|470491594|ref|NR_077046.1|", "83552", "g11577", "i0", "94.949", "114.248756218905", "198", "10", "99", "0", "1", "198", "1106", "909", "Parachlamydia acanthamoebae strain UV-7 23S ribosomal RNA gene, complete sequence", "blastn", "22964", "311", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Parachlamydiaceae", "Parachlamydia", "Parachlamydia acanthamoebae"], [5462970, "PRJNA1253698_S_NODE_12545_length_197_cov_0.871622_g12179_i0", "PRJNA1253698", "12545", "197", "0.871622", "1.71709534", "uncultured Gemmataceae bacterium", "1914239", "Bacteria", "Bacteria", "246", "7.29e-61", "", "NTclustered", "gi|2874253853|emb|OY969909.1|", "1914239", "g12179", "i0", "96.622", "190.060913705584", "148", "5", "75", "0", "2", "149", "2002707", "2002560", "MAG: uncultured Gemmataceae bacterium isolate MFD01275.bin.c.1 genome assembly, chromosome: 1", "blastn", "37442", "246", "1", "Bacteria", "PVC group", "Pseudomonadati", "Planctomycetota", "Planctomycetia", "Gemmatales", "Gemmataceae", null, "uncultured Gemmataceae bacterium"], [8013109, "PRJNA1253698_S_NODE_21227_length_165_cov_0.887931_g20861_i0", "PRJNA1253698", "21227", "165", "0.887931", "1.46508615", "Bremerella volcania", "2527984", "Bacteria", "Bacteria", "154", "3.68e-33", "", "NTclustered", "gi|1712647354|gb|CP036289.1|", "2527984", "g20861", "i0", "87.313", "154.357575757576", "134", "17", "85", "0", "4", "137", "2674515", "2674648", "Bremerella volcania strain Pan97 chromosome, complete genome", "blastn", "25469", "154", "1", "Bacteria", "PVC group", "Pseudomonadati", "Planctomycetota", "Planctomycetia", "Pirellulales", "Pirellulaceae", "Bremerella", "Bremerella volcania"], [8013121, "PRJNA1253698_S_NODE_2707_length_433_cov_2.403646_g2343_i0", "PRJNA1253698", "2707", "433", "2.403646", "10.40778718", "uncultured Gemmataceae bacterium", "1914239", "Bacteria", "Bacteria", "418", "3.5799999999999995e-112", "", "NTclustered", "gi|2874253749|emb|OY969623.1|", "1914239", "g2343", "i0", "84.439", "162.15935334873", "437", "55", "98", "10", "8", "432", "7050836", "7050401", "MAG: uncultured Gemmataceae bacterium isolate MFD06742.bin.c.1 genome assembly, chromosome: 1", "blastn", "70215", "418", "1", "Bacteria", "PVC group", "Pseudomonadati", "Planctomycetota", "Planctomycetia", "Gemmatales", "Gemmataceae", null, "uncultured Gemmataceae bacterium"], [9287890, "PRJNA1253698_S_NODE_4448_length_330_cov_1.217082_g4082_i0", "PRJNA1253698", "4448", "330", "1.217082", "4.0163706", "uncultured Parachlamydiaceae bacterium", "464461", "Bacteria", "Bacteria", "453", "7.29e-123", "", "NTclustered", "gi|2874253811|emb|OY969795.1|", "464461", "g4082", "i0", "91.541", "138.981818181818", "331", "24", "99", "4", "1", "329", "2061045", "2060717", "MAG: uncultured Parachlamydiaceae bacterium isolate MFD05502.bin.c.3 genome assembly, chromosome: 1", "blastn", "45864", "453", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Parachlamydiaceae", null, "uncultured Parachlamydiaceae bacterium"], [9980877, "PRJNA1253698_S_NODE_4188_length_340_cov_3.302405_g3822_i0", "PRJNA1253698", "4188", "340", "3.302405", "11.228177", "Isosphaeraceae", "1763524", "Bacteria", "Bacteria", "484", "2.6699999999999994e-132", "", "NTclustered", "gi|1730068067|gb|CP042997.1|", "406548", "g3822", "i0", "92.353", "173.144117647059", "340", "26", "100", "0", "1", "340", "5180272", "5180611", "Aquisphaera giovannonii strain OJF2 chromosome, complete genome", "blastn", "58869", "488", "0.991803278688525", "Bacteria", "PVC group", "Pseudomonadati", "Planctomycetota", "Planctomycetia", "Isosphaerales", "Isosphaeraceae", "Aquisphaera", "Aquisphaera giovannonii"], [10563762, "PRJNA1253698_S_NODE_21109_length_165_cov_0.896552_g20743_i0", "PRJNA1253698", "21109", "165", "0.896552", "1.4793108", "Rosistilla ulvae", "1930277", "Bacteria", "Bacteria", "169", "1.31e-37", "", "NTclustered", "gi|1712438206|gb|CP036261.1|", "1930277", "g20743", "i0", "90.625", "65.1757575757576", "128", "10", "77", "2", "1", "127", "975932", "976058", "Rosistilla ulvae strain EC9 chromosome", "blastn", "10754", "169", "1", "Bacteria", "PVC group", "Pseudomonadati", "Planctomycetota", "Planctomycetia", "Pirellulales", "Pirellulaceae", "Rosistilla", "Rosistilla ulvae"], [11838277, "PRJNA1253698_S_NODE_17110_length_172_cov_1.186992_g16744_i0", "PRJNA1253698", "17110", "172", "1.186992", "2.04162624", "uncultured Chlamydiales bacterium", "174324", "Bacteria", "Bacteria", "283", "4.700000000000002e-72", "", "NTclustered", "gi|880804243|gb|KT262987.1|", "174324", "g16744", "i0", "97.024", "91.5174418604651", "168", "5", "98", "0", "2", "169", "168", "1", "Uncultured Chlamydiales bacterium clone SW2A 16S ribosomal RNA gene, partial sequence", "blastn", "15741", "283", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Chlamydiales", null, null, "uncultured Chlamydiales bacterium"], [13113531, "PRJNA1253698_S_NODE_20751_length_165_cov_1.163793_g20385_i0", "PRJNA1253698", "20751", "165", "1.163793", "1.92025845", "Symmachiella dynata", "2527995", "Bacteria", "Bacteria", "150", "4.76e-32", "", "NTclustered", "gi|1712609668|gb|CP036276.1|", "2527995", "g20385", "i0", "85.034", "60.5212121212121", "147", "22", "89", "0", "4", "150", "1041607", "1041461", "Symmachiella dynata strain Mal52 chromosome, complete genome", "blastn", "9986", "150", "1", "Bacteria", "PVC group", "Pseudomonadati", "Planctomycetota", "Planctomycetia", "Planctomycetales", "Planctomycetaceae", "Symmachiella", "Symmachiella dynata"], [14388814, "PRJNA1253698_S_NODE_6692_length_266_cov_0.875576_g6326_i0", "PRJNA1253698", "6692", "266", "0.875576", "2.32903216", "uncultured Planctomycetota bacterium", "120965", "Bacteria", "Bacteria", "344", "3.58e-90", "", "NTclustered", "gi|576901465|gb|KF827058.1|", "120965", "g6326", "i0", "90.299", "39.6127819548872", "268", "19", "99", "7", "2", "266", "306", "43", "Uncultured planctomycete clone B-30-43 16S ribosomal RNA gene, partial sequence", "blastn", "10537", "344", "1", "Bacteria", "PVC group", "Pseudomonadati", "Planctomycetota", null, null, null, null, "uncultured Planctomycetota bacterium"], [15662553, "PRJNA1253698_S_NODE_18313_length_168_cov_1.949580_g17947_i0", "PRJNA1253698", "18313", "168", "1.94958", "3.2752944", "Neochlamydia hartmannellae", "112235", "Bacteria", "Bacteria", "272", "9.95e-69", "", "NTclustered", "gi|219857449|ref|NR_025037.1|", "112235", "g17947", "i0", "100", "97.5952380952381", "147", "0", "88", "0", "1", "147", "279", "425", "Neochlamydia hartmannellae strain A1Hsp 16S ribosomal RNA, partial sequence", "blastn", "16396", "272", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Parachlamydiaceae", "Neochlamydia", "Neochlamydia hartmannellae"], [19485668, "PRJNA1253698_S_NODE_17296_length_171_cov_1.262295_g16930_i0", "PRJNA1253698", "17296", "171", "1.262295", "2.15852445", "Opitutus sp. VeGlc2", "134634", "Bacteria", "Bacteria", "274", "2.8099999999999996e-69", "", "NTclustered", "gi|164510706|emb|AJ966885.1|", "134634", "g16930", "i0", "95.858", "168.654970760234", "169", "7", "99", "0", "2", "170", "2681", "2513", "Opitutus sp. VeGlc2 16S rRNA gene (partial), 23S rRNA gene, tRNA-Ala gene, tRNA-Ile gene, ITS1 and ITS2, strain DSM 11246", "blastn", "28840", "274", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Opitutia", "Opitutales", "Opitutaceae", "Opitutus", "Opitutus sp. VeGlc2"], [19485740, "PRJNA1253698_S_NODE_9716_length_221_cov_1.087209_g9350_i0", "PRJNA1253698", "9716", "221", "1.087209", "2.40273189", "uncultured Parachlamydiaceae bacterium", "464461", "Bacteria", "Bacteria", "298", "2.28e-76", "", "NTclustered", "gi|2874253811|emb|OY969795.1|", "464461", "g9350", "i0", "90.991", "108.995475113122", "222", "18", "100", "2", "1", "221", "2060160", "2060380", "MAG: uncultured Parachlamydiaceae bacterium isolate MFD05502.bin.c.3 genome assembly, chromosome: 1", "blastn", "24088", "298", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Parachlamydiaceae", null, "uncultured Parachlamydiaceae bacterium"], [20761213, "PRJNA1253698_S_NODE_14757_length_183_cov_1.604478_g14391_i0", "PRJNA1253698", "14757", "183", "1.604478", "2.93619474", "Waddlia malaysiensis", "219016", "Bacteria", "Bacteria", "167", "5.33e-37", "", "NTclustered", "gi|27903501|gb|AY184804.1|", "219016", "g14391", "i0", "83.616", "135.415300546448", "177", "27", "96", "2", "5", "180", "2073", "2248", "Waddlia sp. G817 16S ribosomal RNA gene and 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence", "blastn", "24781", "167", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Waddliaceae", "Waddlia", "Waddlia malaysiensis"], [20761266, "PRJNA1253698_S_NODE_6717_length_265_cov_1.703704_g6351_i0", "PRJNA1253698", "6717", "265", "1.703704", "4.5148156", "Aquisphaera giovannonii", "406548", "Bacteria", "Bacteria", "433", "7.399999999999998e-117", "", "NTclustered", "gi|1730068067|gb|CP042997.1|", "406548", "g6351", "i0", "96.212", "179.301886792453", "264", "10", "99", "0", "2", "265", "5181004", "5180741", "Aquisphaera giovannonii strain OJF2 chromosome, complete genome", "blastn", "47515", "433", "1", "Bacteria", "PVC group", "Pseudomonadati", "Planctomycetota", "Planctomycetia", "Isosphaerales", "Isosphaeraceae", "Aquisphaera", "Aquisphaera giovannonii"], [22036321, "PRJNA1253698_S_NODE_19938_length_166_cov_1.307692_g19572_i0", "PRJNA1253698", "19938", "166", "1.307692", "2.17076872", "uncultured Gemmataceae bacterium", "1914239", "Bacteria", "Bacteria", "202", "1.2999999999999998e-47", "", "NTclustered", "gi|2874253749|emb|OY969623.1|", "1914239", "g19572", "i0", "88.69", "37.2289156626506", "168", "15", "100", "4", "1", "166", "7050404", "7050239", "MAG: uncultured Gemmataceae bacterium isolate MFD06742.bin.c.1 genome assembly, chromosome: 1", "blastn", "6180", "202", "1", "Bacteria", "PVC group", "Pseudomonadati", "Planctomycetota", "Planctomycetia", "Gemmatales", "Gemmataceae", null, "uncultured Gemmataceae bacterium"], [24585978, "PRJNA1253698_S_NODE_4480_length_328_cov_2.369176_g4114_i0", "PRJNA1253698", "4480", "328", "2.369176", "7.77089728", "uncultured Gemmataceae bacterium", "1914239", "Bacteria", "Bacteria", "370", "7.5e-98", "", "NTclustered", "gi|2874253749|emb|OY969623.1|", "1914239", "g4114", "i0", "87.311", "95.3993902439024", "331", "33", "98", "8", "6", "328", "7051687", "7051358", "MAG: uncultured Gemmataceae bacterium isolate MFD06742.bin.c.1 genome assembly, chromosome: 1", "blastn", "31291", "370", "1", "Bacteria", "PVC group", "Pseudomonadati", "Planctomycetota", "Planctomycetia", "Gemmatales", "Gemmataceae", null, "uncultured Gemmataceae bacterium"]], "truncated": false, "filtered_table_rows_count": 21, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_clade\" = :p2 order by rowid limit 101", "params": {"p0": "blastn", "p1": "PRJNA1253698", "p2": "PVC group"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA1253698&tax_clade=PVC+group", "results": [{"value": "PRJNA1253698", "label": "PRJNA1253698", "count": 21, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&tax_clade=PVC+group", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA1253698&tax_clade=PVC+group", "results": [{"value": "blastn", "label": "blastn", "count": 21, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1253698&tax_clade=PVC+group", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA1253698&tax_clade=PVC+group", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 21, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA1253698&tax_clade=PVC+group&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA1253698&tax_clade=PVC+group", "results": [{"value": "PVC group", "label": "PVC group", "count": 21, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA1253698", "selected": true}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA1253698&tax_clade=PVC+group", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 21, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA1253698&tax_clade=PVC+group&tax_kingdom=Pseudomonadati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA1253698&tax_clade=PVC+group", "results": [{"value": "Planctomycetota", "label": "Planctomycetota", "count": 11, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA1253698&tax_clade=PVC+group&tax_phylum=Planctomycetota", "selected": false}, {"value": "Chlamydiota", "label": "Chlamydiota", "count": 7, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA1253698&tax_clade=PVC+group&tax_phylum=Chlamydiota", "selected": false}, {"value": "Verrucomicrobiota", "label": "Verrucomicrobiota", "count": 3, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA1253698&tax_clade=PVC+group&tax_phylum=Verrucomicrobiota", "selected": false}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 133.80540300022403}