{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"blastn\", bioproject = \"PRJNA1160211\" and tax_phylum = \"Chlamydiota\"", "rows": [[5412155, "PRJNA1160211_S_NODE_123485_length_415_cov_6.921053_g122256_i0", "PRJNA1160211", "123485", "415", "6.921053", "28.72236995", "uncultured Chlamydiae bacterium", "305355", "Bacteria", "Bacteria", "431", "4.39e-116", "", "NTclustered", "gi|2874254045|emb|OY970369.1|", "305355", "g122256", "i0", "86.945", "359.681927710843", "383", "50", "92", "0", "10", "392", "173745", "173363", "MAG: uncultured Chlamydiae bacterium isolate MFD06092.bin.1.176 genome assembly, chromosome: 1", "blastn", "149268", "431", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", null, null, null, "uncultured Chlamydiae bacterium"], [6688774, "PRJNA1160211_S_NODE_866_length_1453_cov_24.929710_g672_i0", "PRJNA1160211", "866", "1453", "24.92971", "362.2286863", "Parachlamydiales bacterium", "2052178", "Bacteria", "Bacteria", "2056", "0", "", "NTclustered", "gi|2874253890|emb|OY970065.1|", "2052178", "g672", "i0", "92.727", "159.966276668961", "1430", "95", "98", "6", "3", "1430", "627413", "625991", "MAG: Parachlamydiales bacterium isolate MFD09286.bin.c.6 genome assembly, chromosome: 1", "blastn", "232431", "2056", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", null, null, "Parachlamydiales bacterium"], [6688779, "PRJNA1160211_S_NODE_87166_length_483_cov_4.221951_g85944_i0", "PRJNA1160211", "87166", "483", "4.221951", "20.39202333", "uncultured Parachlamydiaceae bacterium", "464461", "Bacteria", "Bacteria", "536", "1.07e-147", "", "NTclustered", "gi|2874253811|emb|OY969795.1|", "464461", "g85944", "i0", "87.716", "135.995859213251", "464", "51", "95", "6", "1", "460", "654942", "655403", "MAG: uncultured Parachlamydiaceae bacterium isolate MFD05502.bin.c.3 genome assembly, chromosome: 1", "blastn", "65686", "536", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Parachlamydiaceae", null, "uncultured Parachlamydiaceae bacterium"], [9237168, "PRJNA1160211_S_NODE_137468_length_393_cov_4.503125_g136236_i0", "PRJNA1160211", "137468", "393", "4.503125", "17.69728125", "Candidatus Protochlamydia naegleriophila", "389348", "Bacteria", "Bacteria", "518", "3.08e-142", "", "NTclustered", "gi|971146634|emb|LN879502.1|", "389348", "g136236", "i0", "92.12", "107.40203562341", "368", "27", "93", "2", "1", "367", "1249984", "1249618", "Protochlamydia naegleriophila genome assembly PNK1, chromosome : cPNK", "blastn", "42209", "518", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Parachlamydiaceae", "Candidatus Protochlamydia", "Candidatus Protochlamydia naegleriophila"], [9238825, "PRJNA1160211_S_NODE_908_length_1435_cov_19.321586_g672_i1", "PRJNA1160211", "908", "1435", "19.321586", "277.2647591", "Parachlamydiales bacterium", "2052178", "Bacteria", "Bacteria", "1945", "0", "", "NTclustered", "gi|2874253890|emb|OY970065.1|", "2052178", "g672", "i1", "91.538", "157.819512195122", "1430", "94", "98", "7", "24", "1433", "625991", "627413", "MAG: Parachlamydiales bacterium isolate MFD09286.bin.c.6 genome assembly, chromosome: 1", "blastn", "226471", "1945", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", null, null, "Parachlamydiales bacterium"], [12517793, "PRJNA1160211_S_NODE_93830_length_469_cov_9.666667_g92605_i0", "PRJNA1160211", "93830", "469", "9.666667", "45.33666823", "Parachlamydiales", "1963360", "Bacteria", "Bacteria", "320", "1.1299999999999999e-82", "", "NTclustered", "gi|31747861|gb|AY140910.1|", "206681", "g92605", "i0", "81.446", "157.008528784648", "415", "55", "88", "18", "35", "445", "8028", "7632", "Candidatus Fritschea bemisiae strain Falk YaeL (yaeL) gene, partial cds; putative glycosylhydrolase and putative transposase genes, complete cds; 16S ribosomal RNA and 23S ribosomal RNA genes, complete sequence; putative endonuclease gene, complete cds; 5S ribosomal RNA gene, complete sequence; argynyl tRNA synthetase (argS), YjeE (yjeE), probable GTP-binding protein, DNA polymerase III epsilon subunit, and phosphoglycerate kinase (pgk) genes, complete cds; and unknown gene", "blastn", "73637", "322", "0.993788819875776", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Simkaniaceae", "Candidatus Fritschea", "Candidatus Fritschea bemisiae"], [13064088, "PRJNA1160211_S_NODE_44271_length_594_cov_62.587332_g43117_i0", "PRJNA1160211", "44271", "594", "62.587332", "371.76875208", "Parachlamydiales bacterium", "2052178", "Bacteria", "Bacteria", "929", "0", "", "NTclustered", "gi|2874253890|emb|OY970065.1|", "2052178", "g43117", "i0", "96.134", "101.656565656566", "569", "22", "96", "0", "1", "569", "624713", "624145", "MAG: Parachlamydiales bacterium isolate MFD09286.bin.c.6 genome assembly, chromosome: 1", "blastn", "60384", "929", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", null, null, "Parachlamydiales bacterium"], [18161695, "PRJNA1160211_S_NODE_251535_length_260_cov_6.048128_g250302_i0", "PRJNA1160211", "251535", "260", "6.048128", "15.7251328", "uncultured Parachlamydiaceae bacterium", "464461", "Bacteria", "Bacteria", "307", "4.58e-79", "", "NTclustered", "gi|2874253811|emb|OY969795.1|", "464461", "g250302", "i0", "90.598", "109.273076923077", "234", "19", "89", "3", "7", "237", "655170", "655403", "MAG: uncultured Parachlamydiaceae bacterium isolate MFD05502.bin.c.3 genome assembly, chromosome: 1", "blastn", "28411", "307", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Parachlamydiaceae", null, "uncultured Parachlamydiaceae bacterium"], [20165182, "PRJNA1160211_S_NODE_36836_length_622_cov_4.535519_g35709_i0", "PRJNA1160211", "36836", "622", "4.535519", "28.21092818", "Candidatus Protochlamydia", "282132", "Bacteria", "Bacteria", "926", "0", "", "NTclustered", "gi|1691252667|emb|BX908798.2|", "264201", "g35709", "i0", "93.559", "176.509646302251", "621", "40", "99", "0", "1", "621", "1250557", "1249937", "Candidatus Protochlamydia amoebophila UWE25 complete genome", "blastn", "109789", "926", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Parachlamydiaceae", "Candidatus Protochlamydia", "Candidatus Protochlamydia amoebophila"], [24536554, "PRJNA1160211_S_NODE_56320_length_557_cov_54.855372_g55143_i0", "PRJNA1160211", "56320", "557", "54.855372", "305.54442204", "Candidatus Protochlamydia naegleriophila", "389348", "Bacteria", "Bacteria", "599", "1.5599999999999993e-166", "", "NTclustered", "gi|971146634|emb|LN879502.1|", "389348", "g55143", "i0", "88.008", "101.614003590664", "517", "49", "92", "9", "22", "534", "1249580", "1249073", "Protochlamydia naegleriophila genome assembly PNK1, chromosome : cPNK", "blastn", "56599", "599", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Parachlamydiaceae", "Candidatus Protochlamydia", "Candidatus Protochlamydia naegleriophila"]], "truncated": false, "filtered_table_rows_count": 10, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "blastn", "p1": "PRJNA1160211", "p2": "Chlamydiota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA1160211&tax_phylum=Chlamydiota", "results": [{"value": "PRJNA1160211", "label": "PRJNA1160211", "count": 10, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&tax_phylum=Chlamydiota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA1160211&tax_phylum=Chlamydiota", "results": [{"value": "blastn", "label": "blastn", "count": 10, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1160211&tax_phylum=Chlamydiota", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA1160211&tax_phylum=Chlamydiota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 10, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA1160211&tax_phylum=Chlamydiota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA1160211&tax_phylum=Chlamydiota", "results": [{"value": "PVC group", "label": "PVC group", "count": 10, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA1160211&tax_phylum=Chlamydiota&tax_clade=PVC+group", "selected": false}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA1160211&tax_phylum=Chlamydiota", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 10, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA1160211&tax_phylum=Chlamydiota&tax_kingdom=Pseudomonadati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA1160211&tax_phylum=Chlamydiota", "results": [{"value": "Chlamydiota", "label": "Chlamydiota", "count": 10, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA1160211", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 345.17827500530984}