{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"blastn\", bioproject = \"PRJNA1118794\" and tax_clade = \"core chlorophytes\"", "rows": [[1505717, "PRJNA1118794_P_NODE_60742_length_246_cov_0.890173_g59992_i0", "PRJNA1118794", "60742", "246", "0.890173", "2.18982558", "Kirchneriella aperta", "117505", "Plants", "Plants", "52.8", "0.022", "", "NTclustered", "gi|1008861801|ref|NC_029676.1|", "117505", "g59992", "i0", "100", "0.113821138211382", "28", "0", "11", "0", "205", "232", "21802", "21775", "Kirchneriella aperta strain SAG 2004 chloroplast, complete genome", "blastn", "28", "52.8", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Sphaeropleales", "Selenastraceae", "Kirchneriella", "Kirchneriella aperta"], [2781323, "PRJNA1118794_P_NODE_43343_length_261_cov_2.861702_g42593_i0", "PRJNA1118794", "43343", "261", "2.861702", "7.46904222", "Balticola zimbabwiensis", "51690", "Plants", "Plants", "117", "8.32e-22", "", "NTclustered", "gi|6120015|gb|AF183475.1|", "51690", "g42593", "i0", "91.765", "31.4406130268199", "85", "3", "32", "4", "179", "261", "1903", "1821", "Balticola zimbabwiensis strain UTEX LB 1758 28S ribosomal RNA gene, partial sequence", "blastn", "8206", "117", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Chlamydomonadales", "Haematococcaceae", "Balticola", "Balticola zimbabwiensis"], [2781341, "PRJNA1118794_P_NODE_44903_length_258_cov_1.610811_g44153_i0", "PRJNA1118794", "44903", "258", "1.610811", "4.15589238", "Volvox carteri", "3067", "Plants", "Plants", "137", "6.300000000000001e-28", "", "NTclustered", "gi|302843775|ref|XM_002953383.1|", "3068", "g44153", "i0", "83.562", "20.562015503876", "146", "24", "57", "0", "82", "227", "65", "210", "Volvox carteri f. nagariensis uncharacterized protein (VOLCADRAFT_105955), partial mRNA", "blastn", "5305", "137", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Chlamydomonadales", "Volvocaceae", "Volvox", "Volvox carteri"], [5333512, "PRJNA1118794_P_NODE_23445_length_320_cov_1.518219_g22695_i0", "PRJNA1118794", "23445", "320", "1.518219", "4.8583008", "Gloeomonas rubrifilum", "158506", "Plants", "Plants", "56.5", "0.002", "", "NTclustered", "gi|1375380782|dbj|LC360481.1|", "158506", "g22695", "i0", "100", "0.18125", "30", "0", "9", "0", "109", "138", "1458", "1487", "Gloeomonas rubrifilum SAG 3.85 gene for 26S ribosomal RNA, partial sequence", "blastn", "58", "56.5", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Chlamydomonadales", "Chlamydomonadaceae", "Gloeomonas", "Gloeomonas rubrifilum"], [6608653, "PRJNA1118794_P_NODE_31966_length_287_cov_1.383178_g31216_i0", "PRJNA1118794", "31966", "287", "1.383178", "3.96972086", "Auxenochlorella protothecoides", "3075", "Plants", "Plants", "54.7", "0.007", "", "NTclustered", "gi|760442864|ref|XM_011400199.1|", "3075", "g31216", "i0", "83.929", "0.195121951219512", "56", "9", "20", "0", "212", "267", "1184", "1129", "Auxenochlorella protothecoides Heat shock protein 90-2 partial mRNA", "blastn", "56", "54.7", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Trebouxiophyceae", "Chlorellales", "Chlorellaceae", "Auxenochlorella", "Auxenochlorella protothecoides"], [6608802, "PRJNA1118794_P_NODE_43846_length_260_cov_2.139037_g43096_i0", "PRJNA1118794", "43846", "260", "2.139037", "5.5614962", "Phyllosiphon coccidium", "1837062", "Plants", "Plants", "324", "4.55e-84", "", "NTclustered", "gi|2473928268|ref|NC_072900.1|", "1837062", "g43096", "i0", "89.189", "89.6115384615385", "259", "28", "99", "0", "2", "260", "123251", "122993", "Phyllosiphon coccidium clone S213 chloroplast, complete genome", "blastn", "23299", "324", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Trebouxiophyceae", "Watanabeales", "Watanabeaceae", "Phyllosiphon", "Phyllosiphon coccidium"], [6609058, "PRJNA1118794_P_NODE_67086_length_243_cov_1.800000_g66336_i0", "PRJNA1118794", "67086", "243", "1.8", "4.374", "Coccomyxa subellipsoidea", "248742", "Plants", "Plants", "139", "1.63e-28", "", "NTclustered", "gi|545355296|ref|XM_005643393.1|", "574566", "g66336", "i0", "80.435", "82.4609053497942", "184", "34", "75", "2", "61", "243", "1732", "1550", "Coccomyxa subellipsoidea C-169 heat shock protein 70 mRNA", "blastn", "20038", "139", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Trebouxiophyceae", null, "Coccomyxaceae", "Coccomyxa", "Coccomyxa subellipsoidea"], [9158540, "PRJNA1118794_P_NODE_4408_length_676_cov_4.645108_g3690_i0", "PRJNA1118794", "4408", "676", "4.645108", "31.40093008", "Chlamydomonas incerta", "51695", "Plants", "Plants", "396", "2.7e-105", "", "NTclustered", "gi|74272606|gb|DQ122868.1|", "51695", "g3690", "i0", "79.89", "6.30621301775148", "547", "104", "80", "6", "96", "639", "572", "29", "Chlamydomonas incerta 40S ribosomal protein S3 mRNA, complete cds", "blastn", "4263", "396", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Chlamydomonadales", "Chlamydomonadaceae", "Chlamydomonas", "Chlamydomonas incerta"], [9953270, "PRJNA1118794_P_NODE_9148_length_466_cov_3.356234_g8400_i0", "PRJNA1118794", "9148", "466", "3.356234", "15.64005044", "Eukaryota", "2759", "Plants", "Plants", "233", "1.5099999999999998e-56", "", "NTclustered", "gi|2082260161|ref|XM_001690941.2|", "3055", "g8400", "i0", "78.689", "42.0944206008584", "366", "67", "78", "10", "89", "450", "190", "548", "Chlamydomonas reinhardtii ribosomal protein S23 (CHLRE_12g504200v5), mRNA", "blastn", "19616", "233", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Chlamydomonadales", "Chlamydomonadaceae", "Chlamydomonas", "Chlamydomonas reinhardtii"], [10434465, "PRJNA1118794_P_NODE_63669_length_245_cov_0.895349_g62919_i0", "PRJNA1118794", "63669", "245", "0.895349", "2.19360505", "Capsosiphon fulvescens", "205396", "Plants", "Plants", "298", "2.57e-76", "", "NTclustered", "gi|1514830526|gb|MH790907.1|", "205396", "g62919", "i0", "89.121", "103.416326530612", "239", "26", "98", "0", "2", "240", "3746", "3984", "Capsosiphon fulvescens clone 5+6_typeB chloroplast sequence", "blastn", "25337", "298", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Ulvophyceae", "Ulotrichales", "Ulotrichaceae", "Capsosiphon", "Capsosiphon fulvescens"], [14259433, "PRJNA1118794_P_NODE_19632_length_341_cov_1.130597_g18882_i0", "PRJNA1118794", "19632", "341", "1.130597", "3.85533577", "Polulichloris maxima", "2704661", "Plants", "Plants", "479", "1.25e-130", "", "NTclustered", "gi|2473928686|ref|NC_072905.1|", "2704661", "g18882", "i0", "92.082", "149.445747800587", "341", "25", "99", "2", "1", "339", "126269", "125929", "Polulichloris maxima clone L123 chloroplast, complete genome", "blastn", "50961", "479", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Trebouxiophyceae", "Watanabeales", "Watanabeaceae", "Polulichloris", "Polulichloris maxima"], [14259887, "PRJNA1118794_P_NODE_55852_length_248_cov_0.880000_g55102_i0", "PRJNA1118794", "55852", "248", "0.88", "2.1824", "Coccomyxa subellipsoidea", "248742", "Plants", "Plants", "62.1", "3.73e-5", "", "NTclustered", "gi|545365919|ref|XM_005647835.1|", "574566", "g55102", "i0", "95", "2.41129032258065", "40", "1", "16", "1", "56", "94", "447", "408", "Coccomyxa subellipsoidea C-169 hypothetical protein partial mRNA", "blastn", "598", "62.1", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Trebouxiophyceae", null, "Coccomyxaceae", "Coccomyxa", "Coccomyxa subellipsoidea"], [15533166, "PRJNA1118794_P_NODE_27193_length_304_cov_1.129870_g26443_i0", "PRJNA1118794", "27193", "304", "1.12987", "3.4348048", "Auxenochlorella protothecoides", "3075", "Plants", "Plants", "180", "1.25e-40", "", "NTclustered", "gi|760437194|ref|XM_011397364.1|", "3075", "g26443", "i0", "83", "7.45394736842105", "200", "32", "65", "2", "49", "247", "439", "241", "Auxenochlorella protothecoides 40S ribosomal protein S3a partial mRNA", "blastn", "2266", "180", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Trebouxiophyceae", "Chlorellales", "Chlorellaceae", "Auxenochlorella", "Auxenochlorella protothecoides"], [18876564, "PRJNA1118794_P_NODE_16515_length_363_cov_1.058621_g15765_i0", "PRJNA1118794", "16515", "363", "1.058621", "3.84279423", "Eukaryota", "2759", "Plants", "Plants", "161", "5.479999999999998e-35", "", "NTclustered", "gi|2082249559|ref|XM_043063790.1|", "3055", "g15765", "i0", "81.683", "38.2176308539945", "202", "29", "55", "8", "116", "313", "155", "352", "Chlamydomonas reinhardtii uncharacterized protein (CHLRE_06g310700v5), mRNA", "blastn", "13873", "161", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Chlamydomonadales", "Chlamydomonadaceae", "Chlamydomonas", "Chlamydomonas reinhardtii"], [21907339, "PRJNA1118794_P_NODE_18338_length_349_cov_1.673913_g17588_i0", "PRJNA1118794", "18338", "349", "1.673913", "5.84195637", "Chlamydomonas reinhardtii", "3055", "Plants", "Plants", "263", "1.4e-65", "", "NTclustered", "gi|2082238339|ref|XM_001701832.2|", "3055", "g17588", "i0", "81.703", "76.4928366762178", "317", "56", "91", "2", "1", "316", "1203", "888", "Chlamydomonas reinhardtii uncharacterized protein (CHLRE_02g080600v5), mRNA", "blastn", "26696", "263", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Chlamydomonadales", "Chlamydomonadaceae", "Chlamydomonas", "Chlamydomonas reinhardtii"], [22701816, "PRJNA1118794_P_NODE_16738_length_361_cov_1.055556_g15988_i0", "PRJNA1118794", "16738", "361", "1.055556", "3.81055716", "Ulva", "3118", "Plants", "Plants", "52.8", "0.034", "", "NTclustered", "gi|2895119976|gb|PV023352.1|", "83797", "g15988", "i0", "100", "0.310249307479224", "28", "0", "8", "0", "324", "351", "66290", "66317", "Ulva taeniata mitochondrion, complete genome", "blastn", "112", "52.8", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Ulvophyceae", "Ulvales", "Ulvaceae", "Ulva", "Ulva taeniata"], [24457287, "PRJNA1118794_P_NODE_71380_length_242_cov_0.911243_g70630_i0", "PRJNA1118794", "71380", "242", "0.911243", "2.20520806", "Chlamydomonas reinhardtii", "3055", "Plants", "Plants", "278", "3.3e-70", "", "NTclustered", "gi|2082235498|ref|XM_001700320.2|", "3055", "g70630", "i0", "87.764", "76.0619834710744", "237", "29", "98", "0", "1", "237", "51", "287", "Chlamydomonas reinhardtii uncharacterized protein (CHLRE_01g002300v5), mRNA", "blastn", "18407", "278", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Chlamydomonadales", "Chlamydomonadaceae", "Chlamydomonas", "Chlamydomonas reinhardtii"]], "truncated": false, "filtered_table_rows_count": 17, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_clade\" = :p2 order by rowid limit 101", "params": {"p0": "blastn", "p1": "PRJNA1118794", "p2": "core chlorophytes"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA1118794&tax_clade=core+chlorophytes", "results": [{"value": "PRJNA1118794", "label": "PRJNA1118794", "count": 17, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&tax_clade=core+chlorophytes", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA1118794&tax_clade=core+chlorophytes", "results": [{"value": "blastn", "label": "blastn", "count": 17, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1118794&tax_clade=core+chlorophytes", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA1118794&tax_clade=core+chlorophytes", "results": [{"value": "Eukaryota", "label": "Eukaryota", "count": 17, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA1118794&tax_clade=core+chlorophytes&tax_superkingdom=Eukaryota", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA1118794&tax_clade=core+chlorophytes", "results": [{"value": "core chlorophytes", "label": "core chlorophytes", "count": 17, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA1118794", "selected": true}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA1118794&tax_clade=core+chlorophytes", "results": [{"value": "Viridiplantae", "label": "Viridiplantae", "count": 17, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA1118794&tax_clade=core+chlorophytes&tax_kingdom=Viridiplantae", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA1118794&tax_clade=core+chlorophytes", "results": [{"value": "Chlorophyta", "label": "Chlorophyta", "count": 17, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA1118794&tax_clade=core+chlorophytes&tax_phylum=Chlorophyta", "selected": false}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 263.08564999635564}