{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"blastn\", bioproject = \"PRJNA1074408\" and tax_phylum = \"Actinomycetota\"", "rows": [[1016442, "PRJNA1074408_S_NODE_1201_length_410_cov_2.245232_g1071_i0", "PRJNA1074408", "1201", "410", "2.245232", "9.2054512", "Microbacterium", "33882", "Bacteria", "Bacteria", "555", "2.4599999999999995e-153", "", "NTclustered", "gi|2530242188|gb|CP103793.1|", "2033", "g1071", "i0", "94.022", "157.087804878049", "368", "18", "89", "4", "1", "366", "1378791", "1378426", "Microbacterium testaceum strain D12 chromosome, complete genome", "blastn", "64406", "555", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Micrococcales", "Microbacteriaceae", "Microbacterium", "Microbacterium testaceum"], [1016450, "PRJNA1074408_S_NODE_621_length_528_cov_5.086598_g496_i0", "PRJNA1074408", "621", "528", "5.086598", "26.85723744", "Microbacterium", "33882", "Bacteria", "Bacteria", "909", "0", "", "NTclustered", "gi|2482566189|gb|CP121274.1|", "1572644", "g496", "i0", "97.727", "179.267045454545", "528", "12", "100", "0", "1", "528", "2452713", "2452186", "Microbacterium proteolyticum strain ustc chromosome, complete genome", "blastn", "94653", "909", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Micrococcales", "Microbacteriaceae", "Microbacterium", "Microbacterium proteolyticum"], [1465588, "PRJNA1074408_S_NODE_5322_length_200_cov_2.184713_g5192_i0", "PRJNA1074408", "5322", "200", "2.184713", "4.369426", "Lawsonella clevelandensis", "1528099", "Bacteria", "Bacteria", "353", "4.25e-93", "", "NTclustered", "gi|1723592958|emb|LR584267.1|", "1528099", "g5192", "i0", "98.5", "436.725", "200", "3", "100", "0", "1", "200", "553426", "553227", "Lawsonella clevelandensis isolate USB-603019 genome assembly, chromosome: 1", "blastn", "87345", "353", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Mycobacteriales", "Lawsonellaceae", "Lawsonella", "Lawsonella clevelandensis"], [2291834, "PRJNA1074408_S_NODE_562_length_548_cov_12.257426_g438_i0", "PRJNA1074408", "562", "548", "12.257426", "67.17069448", "Microbacterium", "33882", "Bacteria", "Bacteria", "761", "0", "", "NTclustered", "gi|470475773|ref|NR_076300.1|", "2033", "g438", "i0", "93.282", "236.713503649635", "521", "28", "94", "5", "34", "548", "11", "530", "Microbacterium testaceum strain StLB037 23S ribosomal RNA gene, complete sequence", "blastn", "129719", "767", "0.992177314211212", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Micrococcales", "Microbacteriaceae", "Microbacterium", "Microbacterium testaceum"], [4844605, "PRJNA1074408_S_NODE_6184_length_187_cov_1.000000_g6054_i0", "PRJNA1074408", "6184", "187", "1", "1.87", "Corynebacterium", "1716", "Bacteria", "Bacteria", "346", "6.56e-91", "", "NTclustered", "gi|1710407388|gb|CP038157.1|", "2594913", "g6054", "i0", "100", "258.251336898396", "187", "0", "100", "0", "1", "187", "914558", "914744", "Corynebacterium sanguinis strain CCUG 58655 chromosome, complete genome", "blastn", "48293", "346", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Mycobacteriales", "Corynebacteriaceae", "Corynebacterium", "Corynebacterium sanguinis"], [6568927, "PRJNA1074408_S_NODE_6986_length_177_cov_1.432836_g6856_i0", "PRJNA1074408", "6986", "177", "1.432836", "2.53611972", "Rubrobacter tropicus", "2653851", "Bacteria", "Bacteria", "322", "1.03e-83", "", "NTclustered", "gi|1822171716|gb|CP045119.1|", "2653851", "g6856", "i0", "99.435", "1", "177", "1", "100", "0", "1", "177", "1966487", "1966311", "Rubrobacter tropicus strain SCSIO 52909 chromosome, complete genome", "blastn", "177", "322", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Rubrobacteria", "Rubrobacterales", "Rubrobacteraceae", "Rubrobacter", "Rubrobacter tropicus"], [7394266, "PRJNA1074408_S_NODE_7546_length_171_cov_1.125000_g7416_i0", "PRJNA1074408", "7546", "171", "1.125", "1.92375", "Nocardiaceae", "85025", "Bacteria", "Bacteria", "316", "4.6e-82", "", "NTclustered", "gi|2637134465|gb|CP140264.1|", "1828", "g7416", "i0", "100", "99.3567251461988", "171", "0", "100", "0", "1", "171", "3351391", "3351221", "Rhodococcoides fascians strain GS01 chromosome, complete genome", "blastn", "16990", "316", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Mycobacteriales", "Nocardiaceae", "Rhodococcoides", "Rhodococcoides fascians"], [7843671, "PRJNA1074408_S_NODE_4327_length_223_cov_1.333333_g4197_i0", "PRJNA1074408", "4327", "223", "1.333333", "2.97333259", "Brachybacterium sp. SGAir0954", "2571029", "Bacteria", "Bacteria", "401", "1.7099999999999992e-107", "", "NTclustered", "gi|1654137461|gb|CP027295.1|", "2571029", "g4197", "i0", "99.103", "230.708520179372", "223", "2", "100", "0", "1", "223", "5705", "5927", "Brachybacterium sp. SGAir0954 chromosome, complete genome", "blastn", "51448", "401", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Micrococcales", "Dermabacteraceae", "Brachybacterium", "Brachybacterium sp. SGAir0954"], [16319044, "PRJNA1074408_S_NODE_4573_length_216_cov_9.768786_g4443_i0", "PRJNA1074408", "4573", "216", "9.768786", "21.10057776", "Micrococcales", "85006", "Bacteria", "Bacteria", "399", "5.909999999999999e-107", "", "NTclustered", "gi|1233695344|gb|KY671173.1|", "2033", "g4443", "i0", "100", "100", "216", "0", "100", "0", "1", "216", "99", "314", "Microbacterium testaceum strain Bu15_41 16S ribosomal RNA gene, partial sequence", "blastn", "21600", "399", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Micrococcales", "Microbacteriaceae", "Microbacterium", "Microbacterium testaceum"], [16319057, "PRJNA1074408_S_NODE_7373_length_173_cov_0.976923_g7243_i0", "PRJNA1074408", "7373", "173", "0.976923", "1.69007679", "Cutibacterium", "1912216", "Bacteria", "Bacteria", "292", "7.87e-75", "", "NTclustered", "gi|1446500593|gb|CP031442.1|", "1747", "g7243", "i0", "100", "251.658959537572", "158", "0", "91", "0", "16", "173", "56587", "56744", "Cutibacterium acnes strain KCOM 1315 chromosome, complete genome", "blastn", "43537", "292", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Propionibacteriales", "Propionibacteriaceae", "Cutibacterium", "Cutibacterium acnes"], [16319060, "PRJNA1074408_S_NODE_93_length_1141_cov_6.029144_g47_i0", "PRJNA1074408", "93", "1141", "6.029144", "68.79253304", "Cutibacterium", "1912216", "Bacteria", "Bacteria", "2050", "0", "", "NTclustered", "gi|1446500593|gb|CP031442.1|", "1747", "g47", "i0", "99.821", "249.36722173532", "1116", "2", "98", "0", "1", "1116", "56465", "55350", "Cutibacterium acnes strain KCOM 1315 chromosome, complete genome", "blastn", "284528", "2050", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Propionibacteriales", "Propionibacteriaceae", "Cutibacterium", "Cutibacterium acnes"], [18042729, "PRJNA1074408_S_NODE_7915_length_167_cov_1.161290_g7785_i0", "PRJNA1074408", "7915", "167", "1.16129", "1.9393543", "Corynebacterium pyruviciproducens", "598660", "Bacteria", "Bacteria", "309", "7.53e-80", "", "NTclustered", "gi|2613058804|gb|CP136958.1|", "598660", "g7785", "i0", "100", "110.215568862275", "167", "0", "100", "0", "1", "167", "379469", "379635", "Corynebacterium pyruviciproducens strain UMB0763 chromosome, complete genome", "blastn", "18406", "309", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Mycobacteriales", "Corynebacteriaceae", "Corynebacterium", "Corynebacterium pyruviciproducens"], [20142908, "PRJNA1074408_S_NODE_1676_length_351_cov_1.961039_g1546_i0", "PRJNA1074408", "1676", "351", "1.961039", "6.88324689", "Corynebacterium", "1716", "Bacteria", "Bacteria", "649", "0", "", "NTclustered", "gi|2869817591|gb|CP175775.1|", "1979527", "g1546", "i0", "100", "367.19943019943", "351", "0", "100", "0", "1", "351", "1928", "1578", "Corynebacterium kefirresidentii strain YSMAA3_1_H1 chromosome, complete genome", "blastn", "128887", "649", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Mycobacteriales", "Corynebacteriaceae", "Corynebacterium", "Corynebacterium kefirresidentii"], [20142916, "PRJNA1074408_S_NODE_5176_length_203_cov_1.800000_g5046_i0", "PRJNA1074408", "5176", "203", "1.8", "3.654", "Bacteria", "2", "Bacteria", "Bacteria", "270", "4.49e-68", "", "NTclustered", "gi|2800755081|gb|CP081300.1|", "2859784", "g5046", "i0", "91.045", "2.97044334975369", "201", "17", "99", "1", "3", "203", "2571649", "2571450", "Streptomyces sp. II-2-2-2 strain Soil LB -1 chromosome, complete genome", "blastn", "603", "270", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Kitasatosporales", "Streptomycetaceae", "Streptomyces", "Streptomyces sp. II-2-2-2"], [21418574, "PRJNA1074408_S_NODE_1277_length_399_cov_11.744382_g1147_i0", "PRJNA1074408", "1277", "399", "11.744382", "46.86008418", "Microbacterium", "33882", "Bacteria", "Bacteria", "732", "0", "", "NTclustered", "gi|470475773|ref|NR_076300.1|", "2033", "g1147", "i0", "99.749", "186.977443609023", "399", "1", "100", "0", "1", "399", "1177", "779", "Microbacterium testaceum strain StLB037 23S ribosomal RNA gene, complete sequence", "blastn", "74604", "732", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Micrococcales", "Microbacteriaceae", "Microbacterium", "Microbacterium testaceum"], [21867808, "PRJNA1074408_S_NODE_9938_length_151_cov_0.888889_g9808_i0", "PRJNA1074408", "9938", "151", "0.888889", "1.34222239", "Blastococcus brunescens", "1564165", "Bacteria", "Bacteria", "230", "5.299999999999999e-56", "", "NTclustered", "gi|2645903955|gb|CP141261.1|", "1564165", "g9808", "i0", "94.079", "30.4900662251656", "152", "8", "100", "1", "1", "151", "1981766", "1981615", "Blastococcus brunescens strain BMG 8361 chromosome, complete genome", "blastn", "4604", "230", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Geodermatophilales", "Geodermatophilaceae", "Blastococcus", "Blastococcus brunescens"], [25242794, "PRJNA1074408_S_NODE_1700_length_349_cov_1.977124_g1570_i0", "PRJNA1074408", "1700", "349", "1.977124", "6.90016276", "Corynebacterium", "1716", "Bacteria", "Bacteria", "593", "4.369999999999998e-165", "", "NTclustered", "gi|2869797333|gb|CP175765.1|", "38304", "g1570", "i0", "99.691", "338.521489971347", "324", "1", "93", "0", "1", "324", "2685", "2362", "Corynebacterium tuberculostearicum strain YSMAA5_1_F11 chromosome, complete genome", "blastn", "118144", "593", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Mycobacteriales", "Corynebacteriaceae", "Corynebacterium", "Corynebacterium tuberculostearicum"]], "truncated": false, "filtered_table_rows_count": 17, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "blastn", "p1": "PRJNA1074408", "p2": "Actinomycetota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA1074408&tax_phylum=Actinomycetota", "results": [{"value": "PRJNA1074408", "label": "PRJNA1074408", "count": 17, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&tax_phylum=Actinomycetota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA1074408&tax_phylum=Actinomycetota", "results": [{"value": "blastn", "label": "blastn", "count": 17, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1074408&tax_phylum=Actinomycetota", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA1074408&tax_phylum=Actinomycetota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 17, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA1074408&tax_phylum=Actinomycetota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA1074408&tax_phylum=Actinomycetota", "results": [], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA1074408&tax_phylum=Actinomycetota", "results": [{"value": "Bacillati", "label": "Bacillati", "count": 17, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA1074408&tax_phylum=Actinomycetota&tax_kingdom=Bacillati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA1074408&tax_phylum=Actinomycetota", "results": [{"value": "Actinomycetota", "label": "Actinomycetota", "count": 17, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA1074408", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 275.2551970042987}