{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"blastn\", bioproject = \"PRJNA1068830\" and tax_clade = \"PVC group\"", "rows": [[1014311, "PRJNA1068830_P_NODE_71641_length_254_cov_1.464088_g70938_i0", "PRJNA1068830", "71641", "254", "1.464088", "3.71878352", "Akkermansia", "239934", "Bacteria", "Bacteria", "246", "9.859999999999999e-61", "", "NTclustered", "gi|1805906055|gb|CP027004.1|", "239935", "g70938", "i0", "100", "49.1692913385827", "133", "0", "52", "0", "1", "133", "1025891", "1026023", "Akkermansia muciniphila strain EB-AMDK-28 chromosome, complete genome", "blastn", "12489", "246", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", "Verrucomicrobiales", "Akkermansiaceae", "Akkermansia", "Akkermansia muciniphila"], [3564602, "PRJNA1068830_P_NODE_21023_length_519_cov_1.553812_g20322_i0", "PRJNA1068830", "21023", "519", "1.553812", "8.06428428", "Bacteria", "2", "Bacteria", "Bacteria", "787", "0", "", "NTclustered", "gi|60266416|gb|AY921870.1|", "156588", "g20322", "i0", "94.038", "96.7976878612717", "520", "29", "100", "2", "1", "519", "521", "3", "Uncultured Verrucomicrobia bacterium clone AKYG386 16S ribosomal RNA gene, partial sequence", "blastn", "50238", "787", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", null, null, null, null, "uncultured Verrucomicrobiota bacterium"], [4008961, "PRJNA1068830_P_NODE_30224_length_415_cov_2.242690_g29521_i0", "PRJNA1068830", "30224", "415", "2.24269", "9.3071635", "Urbifossiella limnaea", "2528023", "Bacteria", "Bacteria", "449", "1.2099999999999998e-121", "", "NTclustered", "gi|1712585314|gb|CP036273.1|", "2528023", "g29521", "i0", "86.473", "99.0674698795181", "414", "50", "99", "5", "6", "415", "2018222", "2017811", "Urbifossiella limnaea strain ETA_A1 chromosome, complete genome", "blastn", "41113", "449", "1", "Bacteria", "PVC group", "Pseudomonadati", "Planctomycetota", "Planctomycetia", "Gemmatales", "Gemmataceae", "Urbifossiella", "Urbifossiella limnaea"], [4009761, "PRJNA1068830_P_NODE_63944_length_271_cov_1.833333_g63241_i0", "PRJNA1068830", "63944", "271", "1.833333", "4.96833243", "Verrucomicrobiia bacterium", "2499141", "Bacteria", "Bacteria", "254", "6.35e-63", "", "NTclustered", "gi|2621704341|emb|OY760937.1|", "2499141", "g63241", "i0", "93.529", "64.2029520295203", "170", "11", "63", "0", "1", "170", "3990701", "3990870", "MAG: Verrucomicrobiae bacterium isolate 066a7682-a1ac-48de-8761-1470dc9e5c3e genome assembly, chromosome: 1", "blastn", "17399", "254", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", null, null, null, "Verrucomicrobiia bacterium"], [6117332, "PRJNA1068830_P_NODE_41465_length_345_cov_0.797794_g40762_i0", "PRJNA1068830", "41465", "345", "0.797794", "2.7523893", "Gemmata", "113", "Bacteria", "Bacteria", "459", "1.65e-124", "", "NTclustered", "gi|12583965|gb|AF245369.1|AF245369", "114", "g40762", "i0", "90.778", "141.214492753623", "347", "26", "100", "5", "1", "345", "1916", "1574", "Gemmata obscuriglobus 23S ribosomal RNA gene, partial sequence", "blastn", "48719", "459", "1", "Bacteria", "PVC group", "Pseudomonadati", "Planctomycetota", "Planctomycetia", "Gemmatales", "Gemmataceae", "Gemmata", "Gemmata obscuriglobus"], [7835474, "PRJNA1068830_P_NODE_50147_length_309_cov_1.983051_g49444_i0", "PRJNA1068830", "50147", "309", "1.983051", "6.12762759", "Methylacidimicrobium sp. B4", "2796139", "Bacteria", "Bacteria", "370", "7.01e-98", "", "NTclustered", "gi|1999103383|gb|CP066203.1|", "2796139", "g49444", "i0", "88.525", "7.03883495145631", "305", "35", "99", "0", "1", "305", "125508", "125812", "Methylacidimicrobium sp. B4 chromosome, complete genome", "blastn", "2175", "370", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", null, null, null, "Methylacidimicrobium", "Methylacidimicrobium sp. B4"], [8667459, "PRJNA1068830_P_NODE_59287_length_283_cov_0.928571_g58584_i0", "PRJNA1068830", "59287", "283", "0.928571", "2.62785593", "Akkermansia", "239934", "Bacteria", "Bacteria", "507", "4.64e-139", "", "NTclustered", "gi|1805960388|gb|CP029703.1|", "239935", "g58584", "i0", "98.94", "94.9540636042403", "283", "3", "100", "0", "1", "283", "2393422", "2393140", "Akkermansia muciniphila strain EB-AMDK-46 chromosome, complete genome", "blastn", "26872", "507", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", "Verrucomicrobiales", "Akkermansiaceae", "Akkermansia", "Akkermansia muciniphila"], [9111187, "PRJNA1068830_P_NODE_7648_length_927_cov_2.555035_g7077_i0", "PRJNA1068830", "7648", "927", "2.555035", "23.68517445", "Pedosphaera parvula", "1032527", "Bacteria", "Bacteria", "1061", "0", "", "NTclustered", "gi|183579829|emb|AM905426.1|", "320771", "g7077", "i0", "87.42", "196.663430420712", "938", "99", "100", "18", "1", "927", "1639", "710", "Bacterium Ellin514 23S rRNA gene, isolate Ellin514", "blastn", "182307", "1061", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Pedosphaerae", "Pedosphaerales", "Pedosphaeraceae", "Pedosphaera", "Pedosphaera parvula"], [10386394, "PRJNA1068830_P_NODE_57449_length_287_cov_1.457944_g56746_i0", "PRJNA1068830", "57449", "287", "1.457944", "4.18429928", "uncultured Chlamydiales bacterium", "174324", "Bacteria", "Bacteria", "252", "2.44e-62", "", "NTclustered", "gi|2874253688|emb|OY969414.1|", "174324", "g56746", "i0", "83.158", "166.933797909408", "285", "39", "99", "6", "1", "284", "2362615", "2362891", "MAG: uncultured Chlamydiales bacterium isolate MFD04463.bin.c.14 genome assembly, chromosome: 1", "blastn", "47910", "252", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Chlamydiales", null, null, "uncultured Chlamydiales bacterium"], [10387112, "PRJNA1068830_P_NODE_85269_length_244_cov_0.912281_g84566_i0", "PRJNA1068830", "85269", "244", "0.912281", "2.22596564", "Akkermansia muciniphila", "239935", "Bacteria", "Bacteria", "351", "1.9399999999999998e-92", "", "NTclustered", "gi|1888387165|gb|CP058562.1|", "239935", "g84566", "i0", "93.724", "26.8729508196721", "239", "8", "95", "2", "1", "232", "1849227", "1849465", "Akkermansia muciniphila strain AK32 chromosome, complete genome", "blastn", "6557", "351", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", "Verrucomicrobiales", "Akkermansiaceae", "Akkermansia", "Akkermansia muciniphila"], [15486570, "PRJNA1068830_P_NODE_87153_length_243_cov_0.917647_g86450_i0", "PRJNA1068830", "87153", "243", "0.917647", "2.22988221", "Akkermansia muciniphila", "239935", "Bacteria", "Bacteria", "444", "3.09e-120", "", "NTclustered", "gi|1805960388|gb|CP029703.1|", "239935", "g86450", "i0", "99.588", "95.4444444444444", "243", "1", "100", "0", "1", "243", "1490564", "1490322", "Akkermansia muciniphila strain EB-AMDK-46 chromosome, complete genome", "blastn", "23193", "444", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", "Verrucomicrobiales", "Akkermansiaceae", "Akkermansia", "Akkermansia muciniphila"], [16760578, "PRJNA1068830_P_NODE_78634_length_249_cov_0.886364_g77931_i0", "PRJNA1068830", "78634", "249", "0.886364", "2.20704636", "Akkermansia muciniphila", "239935", "Bacteria", "Bacteria", "455", "1.47e-123", "", "NTclustered", "gi|2623923984|gb|CP115935.1|", "239935", "g77931", "i0", "99.598", "14", "249", "1", "100", "0", "1", "249", "156275", "156027", "Akkermansia muciniphila strain SDLYAKK8 chromosome, complete genome", "blastn", "3486", "455", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", "Verrucomicrobiales", "Akkermansiaceae", "Akkermansia", "Akkermansia muciniphila"], [20584032, "PRJNA1068830_P_NODE_49657_length_311_cov_1.457983_g48954_i0", "PRJNA1068830", "49657", "311", "1.457983", "4.53432713", "Akkermansia muciniphila", "239935", "Bacteria", "Bacteria", "575", "1.3899999999999995e-159", "", "NTclustered", "gi|2051353120|gb|CP072035.1|", "239935", "g48954", "i0", "100", "38.411575562701", "311", "0", "100", "0", "1", "311", "2448027", "2448337", "Akkermansia muciniphila strain Akk1576 chromosome, complete genome", "blastn", "11946", "575", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", "Verrucomicrobiales", "Akkermansiaceae", "Akkermansia", "Akkermansia muciniphila"], [20584695, "PRJNA1068830_P_NODE_77057_length_250_cov_0.881356_g76354_i0", "PRJNA1068830", "77057", "250", "0.881356", "2.20339", "Akkermansia muciniphila", "239935", "Bacteria", "Bacteria", "462", "8.83e-126", "", "NTclustered", "gi|1805960388|gb|CP029703.1|", "239935", "g76354", "i0", "100", "100", "250", "0", "100", "0", "1", "250", "1338137", "1338386", "Akkermansia muciniphila strain EB-AMDK-46 chromosome, complete genome", "blastn", "25000", "462", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", "Verrucomicrobiales", "Akkermansiaceae", "Akkermansia", "Akkermansia muciniphila"], [20584806, "PRJNA1068830_P_NODE_81397_length_247_cov_0.896552_g80694_i0", "PRJNA1068830", "81397", "247", "0.896552", "2.21448344", "Akkermansia muciniphila", "239935", "Bacteria", "Bacteria", "407", "4.14e-109", "", "NTclustered", "gi|1888387165|gb|CP058562.1|", "239935", "g80694", "i0", "96.356", "40.82995951417", "247", "9", "100", "0", "1", "247", "1850486", "1850732", "Akkermansia muciniphila strain AK32 chromosome, complete genome", "blastn", "10085", "407", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", "Verrucomicrobiales", "Akkermansiaceae", "Akkermansia", "Akkermansia muciniphila"], [23135882, "PRJNA1068830_P_NODE_74059_length_252_cov_0.871508_g73356_i0", "PRJNA1068830", "74059", "252", "0.871508", "2.19620016", "Akkermansia muciniphila", "239935", "Bacteria", "Bacteria", "466", "6.89e-127", "", "NTclustered", "gi|1510315172|gb|CP024736.1|", "239935", "g73356", "i0", "100", "99.9880952380952", "252", "0", "100", "0", "1", "252", "1509647", "1509898", "Akkermansia muciniphila strain EB-AMDK-1 chromosome, complete genome", "blastn", "25197", "466", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", "Verrucomicrobiales", "Akkermansiaceae", "Akkermansia", "Akkermansia muciniphila"], [23966715, "PRJNA1068830_P_NODE_71919_length_253_cov_2.094444_g71216_i0", "PRJNA1068830", "71919", "253", "2.094444", "5.29894332", "Akkermansia", "239934", "Bacteria", "Bacteria", "468", "1.92e-127", "", "NTclustered", "gi|1805960388|gb|CP029703.1|", "239935", "g71216", "i0", "100", "94.9604743083004", "253", "0", "100", "0", "1", "253", "1768351", "1768099", "Akkermansia muciniphila strain EB-AMDK-46 chromosome, complete genome", "blastn", "24025", "468", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", "Verrucomicrobiales", "Akkermansiaceae", "Akkermansia", "Akkermansia muciniphila"], [24409602, "PRJNA1068830_P_NODE_78120_length_249_cov_0.886364_g77417_i0", "PRJNA1068830", "78120", "249", "0.886364", "2.20704636", "Akkermansia muciniphila", "239935", "Bacteria", "Bacteria", "453", "5.29e-123", "", "NTclustered", "gi|2623923984|gb|CP115935.1|", "239935", "g77417", "i0", "99.598", "8.36144578313253", "249", "0", "100", "1", "1", "249", "176065", "175818", "Akkermansia muciniphila strain SDLYAKK8 chromosome, complete genome", "blastn", "2082", "453", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", "Verrucomicrobiales", "Akkermansiaceae", "Akkermansia", "Akkermansia muciniphila"]], "truncated": false, "filtered_table_rows_count": 18, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_clade\" = :p2 order by rowid limit 101", "params": {"p0": "blastn", "p1": "PRJNA1068830", "p2": "PVC group"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA1068830&tax_clade=PVC+group", "results": [{"value": "PRJNA1068830", "label": "PRJNA1068830", "count": 18, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&tax_clade=PVC+group", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA1068830&tax_clade=PVC+group", "results": [{"value": "blastn", "label": "blastn", "count": 18, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1068830&tax_clade=PVC+group", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA1068830&tax_clade=PVC+group", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 18, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA1068830&tax_clade=PVC+group&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA1068830&tax_clade=PVC+group", "results": [{"value": "PVC group", "label": "PVC group", "count": 18, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA1068830", "selected": true}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA1068830&tax_clade=PVC+group", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 18, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA1068830&tax_clade=PVC+group&tax_kingdom=Pseudomonadati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA1068830&tax_clade=PVC+group", "results": [{"value": "Verrucomicrobiota", "label": "Verrucomicrobiota", "count": 15, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA1068830&tax_clade=PVC+group&tax_phylum=Verrucomicrobiota", "selected": false}, {"value": "Planctomycetota", "label": "Planctomycetota", "count": 2, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA1068830&tax_clade=PVC+group&tax_phylum=Planctomycetota", "selected": false}, {"value": "Chlamydiota", "label": "Chlamydiota", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA1068830&tax_clade=PVC+group&tax_phylum=Chlamydiota", "selected": false}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 136.00849799968273}