{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"blastn\", bioproject = \"PRJNA1047551\" and tax_clade = \"core chlorophytes\"", "rows": [[174726, "PRJNA1047551_S_NODE_7661_length_184_cov_6.832215_g7534_i0", "PRJNA1047551", "7661", "184", "6.832215", "12.5712756", "Volvox carteri", "3067", "Plants", "Plants", "62.1", "2.61e-5", "", "NTclustered", "gi|302839476|ref|XM_002951249.1|", "3068", "g7534", "i0", "92.857", "0.228260869565217", "42", "3", "23", "0", "141", "182", "470", "429", "Volvox carteri f. nagariensis component of cytosolic 80S ribosome and 40S small subunit (rps15), mRNA", "blastn", "42", "62.1", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Chlamydomonadales", "Volvocaceae", "Volvox", "Volvox carteri"], [1009855, "PRJNA1047551_S_NODE_9301_length_172_cov_2.240876_g9174_i0", "PRJNA1047551", "9301", "172", "2.240876", "3.85430672", "Chlorophyta", "3041", "Plants", "Plants", "228", "2.2299999999999997e-55", "", "NTclustered", "gi|1518373083|gb|MK201746.1|", "152768", "g9174", "i0", "90.751", "99.0290697674419", "173", "12", "99", "4", "2", "172", "825", "995", "Diplosphaera chodatii strain KZ-26-5 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence", "blastn", "17033", "228", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Trebouxiophyceae", "Prasiolales", "Stichococcaceae", "Diplosphaera", "Diplosphaera chodatii"], [2724990, "PRJNA1047551_S_NODE_11223_length_161_cov_1.571429_g11096_i0", "PRJNA1047551", "11223", "161", "1.571429", "2.53000069", "Haematococcus lacustris", "44745", "Plants", "Plants", "241", "2.66e-59", "", "NTclustered", "gi|1279575454|gb|MF683078.1|", "44745", "g11096", "i0", "94.304", "312.031055900621", "158", "8", "98", "1", "1", "158", "3839", "3683", "Haematococcus lacustris 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast", "blastn", "50237", "241", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Chlamydomonadales", "Haematococcaceae", "Haematococcus", "Haematococcus lacustris"], [4001220, "PRJNA1047551_S_NODE_8304_length_179_cov_5.166667_g8177_i0", "PRJNA1047551", "8304", "179", "5.166667", "9.24833393", "Pseudomuriella schumacherensis", "889459", "Plants", "Plants", "108", "3.19e-19", "", "NTclustered", "gi|1008861385|ref|NC_029669.1|", "889459", "g8177", "i0", "98.361", "47.2569832402235", "61", "1", "34", "0", "2", "62", "100908", "100848", "Pseudomuriella schumacherensis strain SAG 2137 chloroplast, complete genome", "blastn", "8459", "108", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Sphaeropleales", "Pseudomuriellaceae", "Pseudomuriella", "Pseudomuriella schumacherensis"], [5277512, "PRJNA1047551_S_NODE_7325_length_187_cov_14.098684_g7198_i0", "PRJNA1047551", "7325", "187", "14.098684", "26.36453908", "Corbierea radiosa", "51318", "Plants", "Plants", "294", "2.4100000000000003e-75", "", "NTclustered", "gi|18654306|gb|L42987.1|RTCCPRGOLB", "51318", "g7198", "i0", "97.661", "34.7219251336898", "171", "4", "91", "0", "1", "171", "1762", "1592", "Carteria radiosa large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product", "blastn", "6493", "294", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Chlamydomonadales", "Chlamydomonadaceae", "Corbierea", "Corbierea radiosa"], [9102223, "PRJNA1047551_S_NODE_4148_length_232_cov_5.086294_g4021_i0", "PRJNA1047551", "4148", "232", "5.086294", "11.80020208", "Tetradesmus obliquus", "3088", "Plants", "Plants", "407", "3.84e-109", "", "NTclustered", "gi|294358545|gb|GU732418.1|", "3088", "g4021", "i0", "98.276", "99.9784482758621", "232", "4", "100", "0", "1", "232", "272", "41", "Scenedesmus obliquus isolate YSR04 28S ribosomal RNA gene, partial sequence", "blastn", "23195", "407", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Sphaeropleales", "Scenedesmaceae", "Tetradesmus", "Tetradesmus obliquus"], [11653069, "PRJNA1047551_S_NODE_13290_length_152_cov_0.940171_g13163_i0", "PRJNA1047551", "13290", "152", "0.940171", "1.42905992", "Scherffelia dubia", "3190", "Plants", "Plants", "126", "7.22e-25", "", "NTclustered", "gi|87330880|gb|DQ270259.1|", "3190", "g13163", "i0", "82", "0.986842105263158", "150", "25", "98", "2", "1", "149", "501", "353", "Scherffelia dubia glyceraldehyde-3-phosphate dehydrogenase subunit A (gapA) mRNA, complete cds", "blastn", "150", "126", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorodendrophyceae", "Chlorodendrales", "Chlorodendraceae", "Scherffelia", "Scherffelia dubia"], [14203477, "PRJNA1047551_S_NODE_9932_length_168_cov_2.120301_g9805_i0", "PRJNA1047551", "9932", "168", "2.120301", "3.56210568", "Trebouxia sp. SL0000003", "3350044", "Plants", "Plants", "89.8", "1.08e-13", "", "NTclustered", "gi|2917929619|emb|OZ234907.1|", "3350044", "g9805", "i0", "96.296", "0.321428571428571", "54", "2", "32", "0", "1", "54", "159695", "159748", "Trebouxia sp. SL0000003 genome assembly, chromosome: 2", "blastn", "54", "89.8", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Trebouxiophyceae", "Trebouxiales", "Trebouxiaceae", "Trebouxia", "Trebouxia sp. SL0000003"], [16751448, "PRJNA1047551_S_NODE_12714_length_154_cov_1.521008_g12587_i0", "PRJNA1047551", "12714", "154", "1.521008", "2.34235232", "Coccomyxa subellipsoidea", "248742", "Plants", "Plants", "169", "1.2e-37", "", "NTclustered", "gi|545367280|ref|XM_005648425.1|", "574566", "g12587", "i0", "91.736", "5.87012987012987", "121", "10", "79", "0", "2", "122", "410", "530", "Coccomyxa subellipsoidea C-169 ribosomal protein S9 component of cytosolic 80S ribosome and 40S small subunit partial mRNA", "blastn", "904", "169", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Trebouxiophyceae", null, "Coccomyxaceae", "Coccomyxa", "Coccomyxa subellipsoidea"], [16751626, "PRJNA1047551_S_NODE_7194_length_189_cov_1.253247_g7067_i0", "PRJNA1047551", "7194", "189", "1.253247", "2.36863683", "Trebouxia aggregata", "160068", "Plants", "Plants", "80.5", "7.44e-11", "", "NTclustered", "gi|162134372|gb|EU123990.1|", "160068", "g7067", "i0", "82.418", "2.44444444444444", "91", "16", "48", "0", "34", "124", "3905", "3815", "Trebouxia aggregata strain SAG 219-1d M polypeptide of photosystem I (psaM), hypothetical chloroplast RF12 (ycf12), and K protein of photosystem II (psbK) genes, complete cds; and magnesium chelatase subunit of protochlorophyllide (chlI) gene, partial cds; chloroplast", "blastn", "462", "80.5", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Trebouxiophyceae", "Trebouxiales", "Trebouxiaceae", "Trebouxia", "Trebouxia aggregata"], [20575538, "PRJNA1047551_S_NODE_10117_length_167_cov_1.659091_g9990_i0", "PRJNA1047551", "10117", "167", "1.659091", "2.77068197", "Asteromonas gracilis", "3156", "Plants", "Plants", "230", "6.029999999999999e-56", "", "NTclustered", "gi|66864256|gb|DQ015711.1|", "3156", "g9990", "i0", "94.079", "90.7844311377246", "152", "7", "90", "2", "1", "151", "210", "60", "Asteromonas gracilis strain CCMP 813 26S ribosomal RNA gene, partial sequence", "blastn", "15161", "230", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Chlamydomonadales", "Asteromonadaceae", "Asteromonas", "Asteromonas gracilis"]], "truncated": false, "filtered_table_rows_count": 11, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_clade\" = :p2 order by rowid limit 101", "params": {"p0": "blastn", "p1": "PRJNA1047551", "p2": "core chlorophytes"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA1047551&tax_clade=core+chlorophytes", "results": [{"value": "PRJNA1047551", "label": "PRJNA1047551", "count": 11, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&tax_clade=core+chlorophytes", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA1047551&tax_clade=core+chlorophytes", "results": [{"value": "blastn", "label": "blastn", "count": 11, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1047551&tax_clade=core+chlorophytes", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA1047551&tax_clade=core+chlorophytes", "results": [{"value": "Eukaryota", "label": "Eukaryota", "count": 11, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA1047551&tax_clade=core+chlorophytes&tax_superkingdom=Eukaryota", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA1047551&tax_clade=core+chlorophytes", "results": [{"value": "core chlorophytes", "label": "core chlorophytes", "count": 11, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA1047551", "selected": true}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA1047551&tax_clade=core+chlorophytes", "results": [{"value": "Viridiplantae", "label": "Viridiplantae", "count": 11, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA1047551&tax_clade=core+chlorophytes&tax_kingdom=Viridiplantae", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA1047551&tax_clade=core+chlorophytes", "results": [{"value": "Chlorophyta", "label": "Chlorophyta", "count": 11, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA1047551&tax_clade=core+chlorophytes&tax_phylum=Chlorophyta", "selected": false}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 122.54858599044383}