{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"blastn\", bioproject = \"PRJNA1022587\" and tax_phylum = \"Pseudomonadota\"", "rows": [[1004140, "PRJNA1022587_S_NODE_241_length_434_cov_0.991690_g239_i0", "PRJNA1022587", "241", "434", "0.99169", "4.3039346", "Enterobacteriaceae", "543", "Bacteria", "Bacteria", "795", "0", "", "NTclustered", "gi|1482420149|gb|CP032426.1|", "562", "g239", "i0", "99.769", "191.552995391705", "433", "1", "99", "0", "2", "434", "2565613", "2565181", "Escherichia coli strain SCEC020001 chromosome, complete genome", "blastn", "83134", "795", "1", "Bacteria", null, "Pseudomonadati", "Pseudomonadota", "Gammaproteobacteria", "Enterobacterales", "Enterobacteriaceae", "Escherichia", "Escherichia coli"], [2279321, "PRJNA1022587_S_NODE_1462_length_244_cov_1.350877_g1460_i0", "PRJNA1022587", "1462", "244", "1.350877", "3.29613988", "Escherichia", "561", "Bacteria", "Bacteria", "451", "1.86e-122", "", "NTclustered", "gi|2281256354|gb|CP101920.1|", "562", "g1460", "i0", "100", "169.967213114754", "244", "0", "100", "0", "1", "244", "2503212", "2502969", "Escherichia coli strain QA-1986 630 chromosome, complete genome", "blastn", "41472", "451", "1", "Bacteria", null, "Pseudomonadati", "Pseudomonadota", "Gammaproteobacteria", "Enterobacterales", "Enterobacteriaceae", "Escherichia", "Escherichia coli"], [4832148, "PRJNA1022587_S_NODE_1424_length_246_cov_0.884393_g1422_i0", "PRJNA1022587", "1424", "246", "0.884393", "2.17560678", "Escherichia", "561", "Bacteria", "Bacteria", "453", "5.2100000000000006e-123", "", "NTclustered", "gi|2653344983|gb|CP142438.1|", "562", "g1422", "i0", "100", "99.5934959349593", "245", "0", "99", "0", "1", "245", "401737", "401493", "Escherichia coli strain Case 2 chromosome, complete genome", "blastn", "24500", "453", "1", "Bacteria", null, "Pseudomonadati", "Pseudomonadota", "Gammaproteobacteria", "Enterobacterales", "Enterobacteriaceae", "Escherichia", "Escherichia coli"], [6107311, "PRJNA1022587_S_NODE_1065_length_267_cov_3.170103_g1063_i0", "PRJNA1022587", "1065", "267", "3.170103", "8.46417501", "Escherichia", "561", "Bacteria", "Bacteria", "494", "3.38e-135", "", "NTclustered", "gi|2650988455|gb|CP142548.1|", "562", "g1063", "i0", "100", "105.640449438202", "267", "0", "100", "0", "1", "267", "509020", "508754", "Escherichia coli strain ExPEC_A382 chromosome, complete genome", "blastn", "28206", "494", "1", "Bacteria", null, "Pseudomonadati", "Pseudomonadota", "Gammaproteobacteria", "Enterobacterales", "Enterobacteriaceae", "Escherichia", "Escherichia coli"], [6107318, "PRJNA1022587_S_NODE_665_length_312_cov_1.744770_g663_i0", "PRJNA1022587", "665", "312", "1.74477", "5.4436824", "Enterobacteriaceae", "543", "Bacteria", "Bacteria", "577", "3.89e-160", "", "NTclustered", "gi|2650988455|gb|CP142548.1|", "562", "g663", "i0", "100", "199", "312", "0", "100", "0", "1", "312", "2730833", "2731144", "Escherichia coli strain ExPEC_A382 chromosome, complete genome", "blastn", "62088", "577", "1", "Bacteria", null, "Pseudomonadati", "Pseudomonadota", "Gammaproteobacteria", "Enterobacterales", "Enterobacteriaceae", "Escherichia", "Escherichia coli"], [7381796, "PRJNA1022587_S_NODE_1126_length_263_cov_1.215789_g1124_i0", "PRJNA1022587", "1126", "263", "1.215789", "3.19752507", "Enterobacteriaceae", "543", "Bacteria", "Bacteria", "486", "5.5499999999999986e-133", "", "NTclustered", "gi|2650988455|gb|CP142548.1|", "562", "g1124", "i0", "100", "100", "263", "0", "100", "0", "1", "263", "814099", "813837", "Escherichia coli strain ExPEC_A382 chromosome, complete genome", "blastn", "26300", "486", "1", "Bacteria", null, "Pseudomonadati", "Pseudomonadota", "Gammaproteobacteria", "Enterobacterales", "Enterobacteriaceae", "Escherichia", "Escherichia coli"], [9932179, "PRJNA1022587_S_NODE_1548_length_242_cov_0.911243_g1546_i0", "PRJNA1022587", "1548", "242", "0.911243", "2.20520806", "Acinetobacter", "469", "Bacteria", "Bacteria", "435", "1.85e-117", "", "NTclustered", "gi|2676817394|gb|CP144757.1|", "470", "g1546", "i0", "99.58", "97.7892561983471", "238", "1", "98", "0", "5", "242", "3222935", "3223172", "Acinetobacter baumannii strain PUMA0248 chromosome, complete genome", "blastn", "23665", "435", "1", "Bacteria", null, "Pseudomonadati", "Pseudomonadota", "Gammaproteobacteria", "Moraxellales", "Moraxellaceae", "Acinetobacter", "Acinetobacter baumannii"], [9932189, "PRJNA1022587_S_NODE_648_length_314_cov_4.112033_g646_i0", "PRJNA1022587", "648", "314", "4.112033", "12.91178362", "Enterobacteriaceae", "543", "Bacteria", "Bacteria", "545", "1.11e-150", "", "NTclustered", "gi|2450726933|gb|CP118601.1|", "562", "g646", "i0", "100", "93.7929936305732", "295", "0", "94", "0", "1", "295", "620587", "620881", "Escherichia coli strain NB4833 chromosome, complete genome", "blastn", "29451", "545", "1", "Bacteria", null, "Pseudomonadati", "Pseudomonadota", "Gammaproteobacteria", "Enterobacterales", "Enterobacteriaceae", "Escherichia", "Escherichia coli"], [12482986, "PRJNA1022587_S_NODE_1330_length_249_cov_0.875000_g1328_i0", "PRJNA1022587", "1330", "249", "0.875", "2.17875", "Enterobacteriaceae", "543", "Bacteria", "Bacteria", "460", "3.16e-125", "", "NTclustered", "gi|2650988455|gb|CP142548.1|", "562", "g1328", "i0", "100", "100", "249", "0", "100", "0", "1", "249", "786834", "786586", "Escherichia coli strain ExPEC_A382 chromosome, complete genome", "blastn", "24900", "460", "1", "Bacteria", null, "Pseudomonadati", "Pseudomonadota", "Gammaproteobacteria", "Enterobacterales", "Enterobacteriaceae", "Escherichia", "Escherichia coli"], [17581915, "PRJNA1022587_S_NODE_1174_length_258_cov_3.286486_g1172_i0", "PRJNA1022587", "1174", "258", "3.286486", "8.47913388", "Enterobacteriaceae", "543", "Bacteria", "Bacteria", "477", "3.2699999999999985e-130", "", "NTclustered", "gi|2650988455|gb|CP142548.1|", "562", "g1172", "i0", "100", "100", "258", "0", "100", "0", "1", "258", "575544", "575287", "Escherichia coli strain ExPEC_A382 chromosome, complete genome", "blastn", "25800", "477", "1", "Bacteria", null, "Pseudomonadati", "Pseudomonadota", "Gammaproteobacteria", "Enterobacterales", "Enterobacteriaceae", "Escherichia", "Escherichia coli"], [17581916, "PRJNA1022587_S_NODE_1234_length_253_cov_3.811111_g1232_i0", "PRJNA1022587", "1234", "253", "3.811111", "9.64211083", "Enterobacteriaceae", "543", "Bacteria", "Bacteria", "448", "2.5099999999999998e-121", "", "NTclustered", "gi|2650988455|gb|CP142548.1|", "562", "g1232", "i0", "100", "95.6521739130435", "242", "0", "96", "0", "12", "253", "3441749", "3441990", "Escherichia coli strain ExPEC_A382 chromosome, complete genome", "blastn", "24200", "448", "1", "Bacteria", null, "Pseudomonadati", "Pseudomonadota", "Gammaproteobacteria", "Enterobacterales", "Enterobacteriaceae", "Escherichia", "Escherichia coli"], [17581917, "PRJNA1022587_S_NODE_1274_length_251_cov_0.865169_g1272_i0", "PRJNA1022587", "1274", "251", "0.865169", "2.17157419", "Enterobacteriaceae", "543", "Bacteria", "Bacteria", "464", "2.47e-126", "", "NTclustered", "gi|2650988455|gb|CP142548.1|", "562", "g1272", "i0", "100", "100", "251", "0", "100", "0", "1", "251", "1508408", "1508158", "Escherichia coli strain ExPEC_A382 chromosome, complete genome", "blastn", "25100", "464", "1", "Bacteria", null, "Pseudomonadati", "Pseudomonadota", "Gammaproteobacteria", "Enterobacterales", "Enterobacteriaceae", "Escherichia", "Escherichia coli"], [18855760, "PRJNA1022587_S_NODE_615_length_319_cov_0.939024_g613_i0", "PRJNA1022587", "615", "319", "0.939024", "2.99548656", "Enterobacteriaceae", "543", "Bacteria", "Bacteria", "590", "5.1299999999999986e-164", "", "NTclustered", "gi|2737310786|gb|CP157132.1|", "562", "g613", "i0", "100", "100", "319", "0", "100", "0", "1", "319", "2470493", "2470811", "Escherichia coli strain UTAK-18 chromosome, complete genome", "blastn", "31900", "590", "1", "Bacteria", null, "Pseudomonadati", "Pseudomonadota", "Gammaproteobacteria", "Enterobacterales", "Enterobacteriaceae", "Escherichia", "Escherichia coli"], [18855763, "PRJNA1022587_S_NODE_835_length_290_cov_1.580645_g833_i0", "PRJNA1022587", "835", "290", "1.580645", "4.5838705", "Enterobacteriaceae", "543", "Bacteria", "Bacteria", "536", "6.079999999999999e-148", "", "NTclustered", "gi|2244114683|emb|OW968111.1|", "562", "g833", "i0", "100", "100", "290", "0", "100", "0", "1", "290", "3287022", "3286733", "Escherichia coli isolate 602 genome assembly, chromosome: main", "blastn", "29000", "536", "1", "Bacteria", null, "Pseudomonadati", "Pseudomonadota", "Gammaproteobacteria", "Enterobacterales", "Enterobacteriaceae", "Escherichia", "Escherichia coli"], [20130492, "PRJNA1022587_S_NODE_1216_length_255_cov_1.082418_g1214_i0", "PRJNA1022587", "1216", "255", "1.082418", "2.7601659", "Acinetobacter", "469", "Bacteria", "Bacteria", "472", "1.5e-128", "", "NTclustered", "gi|1995439409|gb|CP070866.1|", "40214", "g1214", "i0", "100", "637.050980392157", "255", "0", "100", "0", "1", "255", "497495", "497241", "Acinetobacter johnsonii strain XY27 chromosome, complete genome", "blastn", "162448", "472", "1", "Bacteria", null, "Pseudomonadati", "Pseudomonadota", "Gammaproteobacteria", "Moraxellales", "Moraxellaceae", "Acinetobacter", "Acinetobacter johnsonii"]], "truncated": false, "filtered_table_rows_count": 15, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "blastn", "p1": "PRJNA1022587", "p2": "Pseudomonadota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA1022587&tax_phylum=Pseudomonadota", "results": [{"value": "PRJNA1022587", "label": "PRJNA1022587", "count": 15, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&tax_phylum=Pseudomonadota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA1022587&tax_phylum=Pseudomonadota", "results": [{"value": "blastn", "label": "blastn", "count": 15, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1022587&tax_phylum=Pseudomonadota", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA1022587&tax_phylum=Pseudomonadota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 15, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA1022587&tax_phylum=Pseudomonadota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA1022587&tax_phylum=Pseudomonadota", "results": [], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA1022587&tax_phylum=Pseudomonadota", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 15, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA1022587&tax_phylum=Pseudomonadota&tax_kingdom=Pseudomonadati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA1022587&tax_phylum=Pseudomonadota", "results": [{"value": "Pseudomonadota", "label": "Pseudomonadota", "count": 15, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJNA1022587", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 289.33999901346397}