{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"blastn\", bioproject = \"PRJEB8827\" and tax_kingdom = \"Pararnavirae\"", "rows": [[144888, "PRJEB8827_P_NODE_1861_length_185_cov_6.096154_g1839_i0", "PRJEB8827", "1861", "185", "6.096154", "11.2778849", "Lentivirus humimdef1", "3418650", "Viruses", "Viruses", "200", "5.329999999999998e-47", "", "NTclustered", "gi|1328390092|gb|MG197093.1|", "11676", "g1839", "i0", "88.69", "91.2810810810811", "168", "13", "91", "5", "18", "185", "6952", "6791", "HIV-1 isolate 505_1730a.WG05 from USA nonfunctional gag protein (gag) gene, complete sequence; pol protein (pol) gene, partial cds; vif protein (vif), vpr protein (vpr), tat protein (tat), rev protein (rev), and vpu protein (vpu) genes, complete cds; nonfunctional envelope glycoprotein (env) gene, complete sequence; and nef protein (nef) gene, complete cds", "blastn", "16887", "200", "1", "Viruses", null, "Pararnavirae", 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sequence", "blastn", "20573", "276", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [21821713, "PRJEB8827_P_NODE_1498_length_198_cov_1.142012_g1476_i0", "PRJEB8827", "1498", "198", "1.142012", "2.26118376", "Lentivirus humimdef1", "3418650", "Viruses", "Viruses", "289", "1.1999999999999999e-73", "", "NTclustered", "gi|408721024|gb|JQ269217.1|", "11676", "g1476", "i0", "92.929", "99.9949494949495", "198", "14", "100", "0", "1", "198", "540", "737", "HIV-1 isolate 10SYD4-9178 from South Korea vif protein (vif) and vpr protein (vpr) genes, complete cds; and tat protein (tat) gene, partial cds", "blastn", "19799", "289", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [24370762, "PRJEB8827_P_NODE_3520_length_157_cov_1.210938_g3498_i0", "PRJEB8827", "3520", "157", "1.210938", "1.90117266", "Lentivirus humimdef1", "3418650", "Viruses", "Viruses", "248", "1.54e-61", "", "NTclustered", "gi|294722519|gb|GQ433069.1|", "11676", "g3498", "i0", "95.484", "98.8662420382166", "155", "7", "99", "0", "3", "157", "515", "361", "HIV-1 clone CMNYU124(9)34 from Cameroon pol protein (pol) gene, partial cds; vif protein (vif) and vpr protein (vpr) genes, complete cds; and tat protein (tat), rev protein (rev), vpu protein (vpu), and envelope glycoprotein (env) genes, partial cds", "blastn", "15522", "248", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25530199, "PRJEB8827g_S_NODE_1313_length_267_cov_1.551724_g1292_i0", "PRJEB8827", "1313", "267", "1.551724", "4.14310308", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "241", "4.86e-59", "", "NTclustered", "gi|190351833|gb|EU744003.1|", "11676", "g1292", "i0", "83.275", "87.5056179775281", "287", "23", "100", "16", "1", "267", "644", "363", "HIV-1 isolate H1.46.5B3 from Netherlands envelope glycoprotein (env) gene, complete cds", "blastn", "23364", "241", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25530205, "PRJEB8827g_S_NODE_1529_length_251_cov_11.097222_g1508_i0", "PRJEB8827", "1529", "251", "11.097222", "27.85402722", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "392", "1.18e-104", "", "NTclustered", "gi|34765781|gb|AY371716.1|", "11676", "g1508", "i0", "94.821", "99.9043824701195", "251", "13", "100", "0", "1", "251", "141", "391", "HIV-1 isolate 00CMNYU4115 from Cameroon gag protein (gag) gene, partial cds", "blastn", "25076", "392", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25530211, "PRJEB8827g_S_NODE_169_length_576_cov_13.913124_g154_i0", "PRJEB8827", "169", "576", "13.913124", "80.13959424", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "575", "2.7299999999999995e-159", "", "NTclustered", "gi|11124940|emb|AJ404110.1|", "11676", "g154", "i0", "85.484", "99.8454861111111", "558", "73", "96", "5", "23", "576", "1", "554", "Human immunodeficiency virus type 1 proviral partial env gene for envelope glycoprotein gp120, strain A_97DC.KS7", "blastn", "57511", "575", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25530214, "PRJEB8827g_S_NODE_1777_length_236_cov_4.641791_g1756_i0", "PRJEB8827", "1777", "236", "4.6417909999999996", "10.95462676", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "364", "2.39e-96", "", "NTclustered", "gi|1219409794|gb|KY797500.1|", "11676", "g1756", "i0", "94.468", "99.3898305084746", "235", "13", "99", "0", "1", "235", "235", "1", "HIV-1 isolate EPM_3691 from Brazil vif protein (vif), pol protein (pol), and vpr protein (vpr) genes, partial cds", "blastn", "23456", "364", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25530216, "PRJEB8827g_S_NODE_1793_length_235_cov_3.590000_g1772_i0", "PRJEB8827", "1793", "235", "3.59", "8.4365", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "363", "8.569999999999998e-96", "", "NTclustered", "gi|723452984|gb|KM354344.1|", "11676", "g1772", "i0", "94.468", "100", "235", "13", "100", "0", "1", "235", "979", "745", "HIV-1 isolate 9024_070808_plasma_25 from USA envelope glycoprotein (env) gene, complete cds", "blastn", "23500", "363", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25530217, "PRJEB8827g_S_NODE_1809_length_234_cov_11.648241_g1788_i0", "PRJEB8827", "1809", "234", "11.648241", "27.25688394", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "346", "8.580000000000001e-91", "", "NTclustered", "gi|18463784|gb|AF418847.1|", "11676", "g1788", "i0", "93.534", "100.179487179487", "232", "15", "99", "0", "1", "232", "318", "87", "HIV-1 isolate 93USPIC1015ea2 from USA envelope glycoprotein gp120 (env) gene, partial cds", "blastn", "23442", "346", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25530221, "PRJEB8827g_S_NODE_1905_length_229_cov_9.829897_g1884_i0", "PRJEB8827", "1905", "229", "9.829897", "22.51046413", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "313", "8.49e-81", "", "NTclustered", "gi|164417628|gb|EU184581.1|", "11676", "g1884", "i0", "92.991", "93.423580786026207", "214", "15", "93", "0", "1", "214", "313", "100", "HIV-1 isolate 976v2_2402 from USA nonfunctional envelope glycoprotein (env) gene, partial sequence", "blastn", "21394", "313", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25530222, "PRJEB8827g_S_NODE_193_length_541_cov_20.723320_g177_i0", "PRJEB8827", "193", "541", "20.72332", "112.1131612", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "680", "0", "", "NTclustered", "gi|1655447382|gb|MH746233.1|", "11676", "g177", "i0", "89.503", "99.2513863216266", "543", "41", "100", "8", "1", "541", "1672", "1144", "HIV-1 isolate S_09_025 from Bulgaria rev protein (rev) and tat protein (tat) genes, partial cds; vpu protein (vpu) and envelope glycoprotein (env) genes, complete cds; and nef protein (nef) gene, partial cds", "blastn", "53695", "680", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25530223, "PRJEB8827g_S_NODE_1945_length_227_cov_39.776042_g1924_i0", "PRJEB8827", "1945", "227", "39.776042", "90.29161534", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "342", "1.07e-89", "", "NTclustered", "gi|920764009|gb|KT283800.1|", "11676", "g1924", "i0", "93.86", "100.229074889868", "228", "12", "100", "2", "1", "227", "1213", "1439", "HIV-1 isolate P1031_8.07_10A from USA envelope glycoprotein (env) gene, complete cds", "blastn", "22752", "342", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25530227, "PRJEB8827g_S_NODE_2137_length_219_cov_2.521739_g2116_i0", "PRJEB8827", "2137", "219", "2.521739", "5.52260841", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "283", "6.31e-72", "", "NTclustered", "gi|2722331931|gb|PP544645.1|", "11676", "g2116", "i0", "90", "99.8310502283105", "220", "20", "100", "2", "1", "219", "1532", "1314", "HIV-1 isolate H11668.34m.A2 from Netherlands vpu protein (vpu) and envelope glycoprotein (env) genes, complete cds; rev protein (rev) and tat protein (tat) genes, partial cds; and nef protein (nef) gene, complete cds", "blastn", "21863", "283", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25530232, "PRJEB8827g_S_NODE_233_length_495_cov_3.380435_g216_i0", "PRJEB8827", "233", "495", "3.380435", "16.73315325", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "710", "0", "", "NTclustered", "gi|386306970|gb|JN014343.1|", "11676", "g216", "i0", "92.525", "100.39595959596", "495", "37", "100", "0", "1", "495", "12", "506", "HIV-1 isolate ZM53F clone 11 from Zambia gag protein (gag) gene, partial cds", "blastn", "49696", "710", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25530235, "PRJEB8827g_S_NODE_2425_length_210_cov_3.691429_g2404_i0", "PRJEB8827", "2425", "210", "3.691429", "7.7520009", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "344", "2.7199999999999998e-90", "", "NTclustered", "gi|2431466170|gb|OP701520.1|", "11676", "g2404", "i0", "96.19", "100", "210", "8", "100", "0", "1", "210", "5113", "5322", "HIV-1 isolate PRA009_PB_PD1posCTLA4neg_87 from Australia, complete genome", "blastn", "21000", "344", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25530236, "PRJEB8827g_S_NODE_2449_length_209_cov_14.919540_g2428_i0", "PRJEB8827", "2449", "209", "14.91954", "31.1818386", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "348", "2.09e-91", "", "NTclustered", "gi|164416981|gb|EU184230.1|", "11676", "g2428", "i0", "96.651", "99.9808612440191", "209", "7", "100", "0", "1", "209", "638", "430", "HIV-1 isolate 892V1_2618 from USA envelope glycoprotein (env) gene, partial cds", "blastn", "20896", "348", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25530241, "PRJEB8827g_S_NODE_2713_length_203_cov_12.107143_g2692_i0", "PRJEB8827", "2713", "203", "12.107143", "24.57750029", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "243", "9.78e-60", "", "NTclustered", "gi|2575864301|gb|OR327233.1|", "11676", "g2692", "i0", "88.406", "102.990147783251", "207", "16", "100", "8", "1", "203", "1100", "1302", "HIV-1 isolate 93CBG4-18908/14723 from South Korea envelope glycoprotein (env) and nef protein (nef) genes, complete cds", "blastn", "20907", "243", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25530242, "PRJEB8827g_S_NODE_2801_length_201_cov_4.036145_g2780_i0", "PRJEB8827", "2801", "201", "4.036145", "8.11265145", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "289", "1.2199999999999998e-73", "", "NTclustered", "gi|1655447035|gb|MK086111.1|", "11676", "g2780", "i0", "92.537", "100.965174129353", "201", "15", "100", "0", "1", "201", "5530", "5330", "HIV-1 isolate LB082_1 from Cameroon, partial genome", "blastn", "20294", "289", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25530243, "PRJEB8827g_S_NODE_3025_length_197_cov_2.487654_g3004_i0", "PRJEB8827", "3025", "197", "2.487654", "4.9006783799999996", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "219", "1.59e-52", "", "NTclustered", "gi|46946834|gb|AY521630.1|", "11676", "g3004", "i0", "87.5", "94.741116751269", "192", "21", "97", "3", "1", "191", "8241", "8052", "HIV-1 isolate DDJ360 from Senegal gag protein (gag) and pol protein (pol) genes, partial cds; vif protein (vif), vpr protein (vpr), and tat protein (tat) genes, complete cds; rev protein-like gene, complete sequence; and vpu protein (vpu), envelope glycoprotein (env), and nef protein (nef) genes, complete cds", "blastn", "18664", "219", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25530247, "PRJEB8827g_S_NODE_353_length_425_cov_25.748718_g334_i0", "PRJEB8827", "353", "425", "25.748718", "109.4320515", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "747", "0", "", "NTclustered", "gi|766625868|gb|KJ704792.1|", "11676", "g334", "i0", "98.578", "99.3811764705882", "422", "6", "99", "0", "4", "425", "1498", "1077", "HIV-1 isolate NYC4 from USA, partial genome", "blastn", "42237", "747", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25530248, "PRJEB8827g_S_NODE_3769_length_186_cov_10.953642_g3748_i0", "PRJEB8827", "3769", "186", "10.953642", "20.37377412", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "289", "1.11e-73", "", "NTclustered", "gi|1963744883|gb|MT794754.1|", "11676", "g3748", "i0", "94.624", "100", "186", "10", "100", "0", "1", "186", "211", "396", "HIV-1 clone MM34.PLAS.SGS.00192.039 from United Kingdom rev protein (rev) and tat protein (tat) genes, partial cds; vpu protein (vpu) and envelope glycoprotein (env) genes, complete cds; and nef protein (nef) gene, partial cds", "blastn", "18600", "289", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25530255, "PRJEB8827g_S_NODE_441_length_388_cov_4.237960_g420_i0", "PRJEB8827", "441", "388", "4.23796", "16.4432848", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "518", "3.04e-142", "", "NTclustered", "gi|60651975|gb|AY835771.1|", "11676", "g420", "i0", "90.979", "100", "388", "29", "100", "1", "1", "388", "6347", "5966", "HIV-1 isolate 5082-86 clone pbf26 from USA, complete genome", "blastn", "38800", "518", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25530259, "PRJEB8827g_S_NODE_537_length_362_cov_41.018349_g516_i0", "PRJEB8827", "537", "362", "41.018349", "148.48642338", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "368", "2.9999999999999997e-97", "", "NTclustered", "gi|658116633|gb|KJ669940.1|", "11676", "g516", "i0", "85.714", "99.0414364640884", "364", "34", "96", "10", "3", "348", "1446", "1083", "HIV-1 isolate M127_27031991_F7 from Netherlands envelope glycoprotein gene, partial cds", "blastn", "35853", "368", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25530261, "PRJEB8827g_S_NODE_5665_length_173_cov_22.826087_g5644_i0", "PRJEB8827", "5665", "173", "22.826087", "39.48913051", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "283", "4.729999999999999e-72", "", "NTclustered", "gi|140089867|gb|EF179881.1|", "11676", "g5644", "i0", "96.023", "102.21387283237", "176", "4", "100", "2", "1", "173", "1098", "923", "HIV-1 isolate LTNP 5005 clone CL1 from France envelope glylcoprotein (env) gene, partial cds", "blastn", "17683", "283", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25530265, "PRJEB8827g_S_NODE_5881_length_172_cov_11.343066_g5860_i0", "PRJEB8827", "5881", "172", "11.343066", "19.51007352", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "254", "3.68e-63", "", "NTclustered", "gi|920764061|gb|KT283826.1|", "11676", "g5860", "i0", "93.605", "100.441860465116", "172", "8", "100", "1", "1", "172", "1267", "1099", "HIV-1 isolate P1031_46.1_1A from USA envelope glycoprotein (env) gene, complete cds", "blastn", "17276", "254", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25530275, "PRJEB8827g_S_NODE_7873_length_165_cov_0.976923_g7852_i0", "PRJEB8827", "7873", "165", "0.976923", "1.61192295", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "213", "5.98e-51", "", "NTclustered", "gi|313511189|gb|HQ595805.1|", "11676", "g7852", "i0", "91.195", "92.5454545454545", "159", "11", "95", "3", "1", "157", "1343", "1186", "HIV-1 isolate T520b_F9 from United Kingdom envelope glycoprotein (env) gene, complete cds; and vpu protein (vpu), rev protein (rev), and tat protein (tat) genes, partial cds", "blastn", "15270", "213", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25530278, "PRJEB8827g_S_NODE_8169_length_164_cov_23.775194_g8148_i0", "PRJEB8827", "8169", "164", "23.775194", "38.99131816", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "287", "3.45e-73", "", "NTclustered", "gi|1828968767|gb|MT033675.1|", "11676", "g8148", "i0", "98.171", "99.3414634146341", "164", "3", "100", "0", "1", "164", "5478", "5315", "HIV-1 isolate 112404_C02 from USA gag protein (gag) gene, complete cds; pol protein (pol) gene, partial cds; vif protein (vif) and vpr protein (vpr) genes, complete cds; nonfunctional tat protein (tat) gene, complete sequence; and rev protein (rev), vpu protein (vpu), envelope glycoprotein (env), and nef protein (nef) genes, complete cds", "blastn", "16292", "287", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25530280, "PRJEB8827g_S_NODE_897_length_304_cov_4.557621_g876_i0", "PRJEB8827", "897", "304", "4.557621", "13.85516784", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "468", "2.37e-127", "", "NTclustered", "gi|641387525|gb|KJ528775.1|", "11676", "g876", "i0", "94.702", "99.3618421052632", "302", "15", "99", "1", "3", "304", "112", "412", "HIV-1 isolate SHAC89S from USA envelope glycoprotein (env) gene, partial cds", "blastn", "30206", "468", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25530282, "PRJEB8827g_S_NODE_945_length_298_cov_3.615970_g924_i0", "PRJEB8827", "945", "298", "3.61597", "10.7755906", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "370", "6.73e-98", "", "NTclustered", "gi|335346845|gb|JN002022.1|", "11676", "g924", "i0", "89.262", "94.2214765100671", "298", "29", "99", "3", "1", "297", "1494", "1199", "HIV-1 isolate CB3sc4 from Australia envelope glycoprotein (env) gene, complete cds", "blastn", "28078", "370", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25530288, "PRJEB8827h_S_NODE_1129_length_282_cov_5.222672_g1110_i0", "PRJEB8827", "1129", "282", "5.222672", "14.72793504", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "355", "1.7699999999999997e-93", "", "NTclustered", "gi|2672113129|gb|PP155043.1|", "11676", "g1110", "i0", "89.399", "100.13475177305", "283", "28", "100", "2", "1", "282", "1117", "836", "HIV-1 isolate NAB078 from India envelope glycoprotein (env) gene, complete cds", "blastn", "28238", "355", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25530289, "PRJEB8827h_S_NODE_1217_length_275_cov_5.737500_g1198_i0", "PRJEB8827", "1217", "275", "5.7375", "15.778125", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "248", "3e-61", "", "NTclustered", "gi|443297450|gb|KC187493.1|", "11676", "g1198", "i0", "83.813", "100.210909090909", "278", "27", "100", "15", "1", "275", "582", "320", "HIV-1 isolate 4049_Plasma_Visit1_amplicon30 from Malawi envelope glycoprotein (env) gene, complete cds", "blastn", "27558", "248", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25530293, "PRJEB8827h_S_NODE_1321_length_266_cov_22.935065_g1302_i0", "PRJEB8827", "1321", "266", "22.935065", "61.0072729", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "425", "1.24e-114", "", "NTclustered", "gi|846121841|gb|KR861271.1|", "11676", "g1302", "i0", "95.489", "100.781954887218", "266", "12", "100", "0", "1", "266", "787", "1052", "HIV-1 isolate bcpp_00155_amp2 from Botswana tat protein (tat) gene, partial cds; nonfunctional rev protein (rev) gene, complete sequence; and truncated vpu protein (vpu), envelope glycoprotein (env), and nef protein (nef) genes, complete cds", "blastn", "26808", "425", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25530295, "PRJEB8827h_S_NODE_13617_length_187_cov_2.815789_g13598_i0", "PRJEB8827", "13617", "187", "2.815789", "5.26552543", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "296", "6.7e-76", "", "NTclustered", "gi|1789282432|gb|MK458049.1|", "11676", "g13598", "i0", "95.263", "91.2780748663102", "190", "3", "98", "1", "1", "184", "2732", "2921", "HIV-1 isolate 074-A-109-1-1_w4_285 from Botswana defective genome", "blastn", "17069", "296", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25530302, "PRJEB8827h_S_NODE_1489_length_256_cov_3.506787_g1470_i0", "PRJEB8827", "1489", "256", "3.506787", "8.97737472", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "372", "1.57e-98", "", "NTclustered", "gi|920670073|gb|KR820295.1|", "11676", "g1470", "i0", "92.941", "98.94921875", "255", "18", "99", "0", "2", "256", "5441", "5695", "HIV-1 isolate Z331F_15Apr09_PL_NFLG_SGA12 from Zambia gag protein (gag) gene, complete cds; pol protein (pol) gene, partial cds; and vif protein (vif), vpr protein (vpr), tat protein (tat), rev protein (rev), vpu protein (vpu), envelope glycoprotein (env), and nef protein (nef) genes, complete cds", "blastn", "25331", "372", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25530310, "PRJEB8827h_S_NODE_1793_length_241_cov_10.053398_g1774_i0", "PRJEB8827", "1793", "241", "10.053398", "24.22868918", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "292", "1.17e-74", "", "NTclustered", "gi|472827311|gb|KC629270.1|", "11676", "g1774", "i0", "89.167", "99.850622406639", "240", "19", "99", "7", "4", "241", "938", "704", "HIV-1 isolate RB_332_14R from Botswana envelope glycoprotein (env) gene, partial cds", "blastn", "24064", "292", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25530317, "PRJEB8827h_S_NODE_209_length_472_cov_10.695652_g190_i0", "PRJEB8827", "209", "472", "10.695652", "50.48347744", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "675", "0", "", "NTclustered", "gi|12957365|gb|AF325762.1|AF325762", "11676", "g190", "i0", "92.585", "100.76906779661", "472", "32", "100", "2", "1", "472", "1230", "762", "HIV-1 isolate TV019-82 from South Africa vif protein (vif) and vpr protein (vpr) genes, complete cds; tat protein (tat) and rev protein (rev) genes, partial cds; and vpu protein (vpu) gene, complete cds", "blastn", "47563", "675", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25530324, "PRJEB8827h_S_NODE_2401_length_223_cov_29.813830_g2382_i0", "PRJEB8827", "2401", "223", "29.81383", "66.4848409", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "348", "2.2500000000000002e-91", "", "NTclustered", "gi|1145096|gb|U36139.1|HIV1U36139", "11676", "g2382", "i0", "94.69", "98.8565022421525", "226", "9", "100", "1", "1", "223", "657", "432", "Human immunodeficiency virus type 1 sample P5.28-7, envelope glycoprotein (env) gene, C2-V5, partial cds", "blastn", "22045", "348", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25530328, "PRJEB8827h_S_NODE_2513_length_221_cov_7.510753_g2494_i0", "PRJEB8827", "2513", "221", "7.510753", "16.59876413", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "375", "1.0199999999999998e-99", "", "NTclustered", "gi|846121841|gb|KR861271.1|", "11676", "g2494", "i0", "97.285", "101.199095022624", "221", "6", "100", "0", "1", "221", "1183", "1403", "HIV-1 isolate bcpp_00155_amp2 from Botswana tat protein (tat) gene, partial cds; nonfunctional rev protein (rev) gene, complete sequence; and truncated vpu protein (vpu), envelope glycoprotein (env), and nef protein (nef) genes, complete cds", "blastn", "22365", "375", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25530351, "PRJEB8827h_S_NODE_39505_length_166_cov_2.793893_g39486_i0", "PRJEB8827", "39505", "166", "2.793893", "4.63786238", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "241", "2.76e-59", "", "NTclustered", "gi|846122008|gb|KR861305.1|", "11676", "g39486", "i0", "92.771", "100.602409638554", "166", "12", "100", "0", "1", "166", "1328", "1163", "HIV-1 isolate bcpp_00421_amp2 from Botswana tat protein (tat) gene, partial cds; truncated rev protein (rev) gene, complete cds; nonfunctional truncated vpu protein (vpu) and nonfunctional envelope glycoprotein (env) genes, complete sequence; truncated envelope glycoprotein (vpu) gene, complete cds; and nonfunctional truncated nef protein (nef) gene, complete sequence", "blastn", "16700", "241", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25530358, "PRJEB8827h_S_NODE_433_length_385_cov_4.854286_g414_i0", "PRJEB8827", "433", "385", "4.854286", "18.6890011", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "403", "8.81e-108", "", "NTclustered", "gi|1527253281|gb|MK205940.1|", "11676", "g414", "i0", "85.938", "100.335064935065", "384", "46", "99", "7", "1", "383", "1349", "973", "HIV-1 isolate CAP255_3100_031wpi_12JB from South Africa envelope glycoprotein (env) gene, complete cds", "blastn", "38629", "403", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25530367, "PRJEB8827h_S_NODE_49929_length_152_cov_7.948718_g49910_i0", "PRJEB8827", "49929", "152", "7.948718", "12.08205136", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "176", "7.07e-40", "", "NTclustered", "gi|262211541|gb|GU080170.1|", "11676", "g49910", "i0", "87.582", "101.572368421053", "153", "17", "100", "2", "1", "152", "1105", "1256", "HIV-1 clone 704MC012F from South Africa env gene, complete sequence", "blastn", "15439", "176", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25530373, "PRJEB8827h_S_NODE_51449_length_151_cov_1.491379_g51430_i0", "PRJEB8827", "51449", "151", "1.491379", "2.25198229", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "241", "2.4500000000000008e-59", "", "NTclustered", "gi|2038124600|gb|MW523106.1|", "11676", "g51430", "i0", "95.364", "97.4304635761589", "151", "7", "100", "0", "1", "151", "136", "286", "HIV-1 isolate 01KBH3-17532 from South Korea vif protein (vif) and vpr protein (vpr) genes, complete cds; and tat protein (tat) and rev protein (rev) genes, partial cds", "blastn", "14712", "241", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25530384, "PRJEB8827h_S_NODE_673_length_335_cov_12.540000_g654_i0", "PRJEB8827", "673", "335", "12.54", "42.009", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "329", "1.3e-85", "", "NTclustered", "gi|1527253287|gb|MK205943.1|", "11676", "g654", "i0", "84.615", "100.286567164179", "338", "45", "99", "7", "3", "335", "973", "1308", "HIV-1 isolate CAP255_3100_031wpi_04JB from South Africa envelope glycoprotein (env) gene, complete cds", "blastn", "33596", "329", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25530390, "PRJEB8827h_S_NODE_825_length_314_cov_8.648746_g806_i0", "PRJEB8827", "825", "314", "8.648746", "27.15706244", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "357", "5.56e-94", "", "NTclustered", "gi|49790394|gb|AY635649.1|", "11676", "g806", "i0", "88.814", "97.0222929936306", "295", "28", "94", "4", "1", "294", "611", "321", "HIV-1 isolate Binyang-429 from China envelope glycoprotein (env) gene, partial cds", "blastn", "30465", "357", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25617801, "PRJEB8827g_S_NODE_577_length_353_cov_11.421384_g556_i0", "PRJEB8827", "577", "353", "11.421384", "40.31748552", "Lentivirus", "11646", "Viruses", "Viruses", "558", "1.61e-154", "", "NTclustered", "gi|140089922|gb|EF179937.1|", "11676", "g556", "i0", "95.198", "100.084985835694", "354", "15", "100", "2", "1", "353", "432", "80", "HIV-1 isolate LTNP 5008 clone CL15 from France envelope glylcoprotein (env) gene, partial cds", "blastn", "35330", "558", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25666146, "PRJEB8827g_S_NODE_1026_length_290_cov_6.513725_g1005_i0", "PRJEB8827", "1026", "290", "6.513725", "18.8898025", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "403", "6.44e-108", "", "NTclustered", "gi|328794|gb|L03699.1|HIVTN239", "11676", "g1005", "i0", "92.254", "96.4068965517241", "284", "22", "98", "0", "1", "284", "274", "557", "Human immunodeficiency virus type 1 (CM239) envelope glycoprotein (env) gene, 5' end", "blastn", "27958", "403", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25666154, "PRJEB8827g_S_NODE_122_length_797_cov_3.393701_g113_i0", "PRJEB8827", "122", "797", "3.393701", "27.04779697", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "1068", "0", "", "NTclustered", "gi|1835285571|gb|MN116205.1|", "11676", "g113", "i0", "90.841", "99.9573400250941", "797", "73", "100", "0", "1", "797", "5578", "4782", "HIV-1 isolate CG-0422-02V from Democratic Republic of the Congo, complete genome", "blastn", "79666", "1068", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25666157, "PRJEB8827g_S_NODE_1322_length_266_cov_6.493506_g1301_i0", "PRJEB8827", "1322", "266", "6.493506", "17.27272596", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "322", "1.68e-83", "", "NTclustered", "gi|222428502|gb|FJ469738.1|", "11676", "g1301", "i0", "88.519", "101.033834586466", "270", "26", "100", "3", "1", "266", "6643", "6375", "HIV-1 isolate L805 from USA gag protein (gag) gene, complete cds; pol protein (pol) gene, partial cds; and envelope glycoprotein (env) and nef protein (nef) genes, complete cds", "blastn", "26875", "322", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25666160, "PRJEB8827g_S_NODE_13602_length_153_cov_1.940678_g13581_i0", "PRJEB8827", "13602", "153", "1.940678", "2.96923734", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "230", "5.39e-56", "", "NTclustered", "gi|1780580107|gb|MG729332.1|", "11676", "g13581", "i0", "93.464", "99.9542483660131", "153", "10", "100", "0", "1", "153", "347", "499", "HIV-1 isolate HIVVIF058-2016MX from Mexico vif protein (vif) gene, complete cds; and pol protein (pol) and vpr protein (vpr) genes, partial cds", "blastn", "15293", "230", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25666165, "PRJEB8827g_S_NODE_1490_length_254_cov_8.931507_g1469_i0", "PRJEB8827", "1490", "254", "8.931507", "22.68602778", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "327", "3.42e-85", "", "NTclustered", "gi|1089680914|gb|KX841776.1|", "11676", "g1469", "i0", "93.607", "87.7716535433071", "219", "14", "86", "0", "1", "219", "401", "183", "HIV-1 isolate REA05e_Timepoint1_DNA_23 from Denmark envelope glycoprotein (env) gene, partial cds", "blastn", "22294", "327", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25666168, "PRJEB8827g_S_NODE_1530_length_251_cov_4.532407_g1509_i0", "PRJEB8827", "1530", "251", "4.532407", "11.37634157", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "379", "9.189999999999998e-101", "", "NTclustered", "gi|1234177235|gb|MF373167.1|", "11676", "g1509", "i0", "95.378", "94.9003984063745", "238", "11", "95", "0", "14", "251", "1440", "1203", "HIV-1 isolate 064GR from Sweden, partial genome", "blastn", "23820", "379", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25666169, "PRJEB8827g_S_NODE_1546_length_250_cov_11.306977_g1525_i0", "PRJEB8827", "1546", "250", "11.306977", "28.2674425", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "357", "4.28e-94", "", "NTclustered", "gi|30794658|gb|AY247224.1|", "11676", "g1525", "i0", "92.4", "99.928", "250", "19", "100", "0", "1", "250", "518", "767", "HIV-1 isolate 81NY3 from USA envelope glycoprotein (env) gene, complete cds", "blastn", "24982", "357", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25666173, "PRJEB8827g_S_NODE_162_length_594_cov_4.974955_g148_i0", "PRJEB8827", "162", "594", "4.974955", "29.5512327", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "593", "7.779999999999998e-165", "", "NTclustered", "gi|158701135|gb|EU164101.1|", "11676", "g148", "i0", "85", "99.3468013468013", "600", "72", "100", "9", "1", "594", "866", "279", "HIV-1 isolate QA584.88M.Ev1v5.L from Kenya envelope glycoprotein (env) gene, partial cds", "blastn", "59012", "593", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25666175, "PRJEB8827g_S_NODE_1682_length_241_cov_16.446602_g1661_i0", "PRJEB8827", "1682", "241", "16.446602", "39.63631082", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "405", "1.45e-108", "", "NTclustered", "gi|428132866|gb|JX263608.1|", "11676", "g1661", "i0", "97.083", "99.6597510373444", "240", "7", "99", "0", "2", "241", "663", "902", "HIV-1 isolate YNLC09R216 from China gag protein (gag) gene, partial cds", "blastn", "24018", "405", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25666177, "PRJEB8827g_S_NODE_1722_length_239_cov_2.970588_g1701_i0", "PRJEB8827", "1722", "239", "2.970588", "7.09970532", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "372", "1.45e-98", "", "NTclustered", "gi|386877703|gb|JQ902462.1|", "11676", "g1701", "i0", "95.299", "98.7615062761506", "234", "11", "98", "0", "6", "239", "235", "2", "HIV-1 isolate H18855_9S2 from Netherlands envelope glycoprotein gene, partial cds", "blastn", "23604", "372", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25666178, "PRJEB8827g_S_NODE_1778_length_236_cov_4.512438_g1757_i0", "PRJEB8827", "1778", "236", "4.512438", "10.64935368", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "351", "1.86e-92", "", "NTclustered", "gi|1798179644|gb|MN695004.1|", "11676", "g1757", "i0", "94.323", "99.5550847457627", "229", "13", "97", "0", "2", "230", "4697", "4469", "HIV-1 isolate G115399 from Uganda gag protein (gag) gene, complete cds; pol protein (pol) gene, partial cds; vif protein (vif) and vpr protein (vpr) genes, complete cds; tat protein (tat) and rev protein (rev) genes, partial cds; nonfunctional vpu protein (vpu) gene, complete sequence; and envelope glycoprotein (env) gene, partial cds", "blastn", "23495", "351", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25666180, "PRJEB8827g_S_NODE_1810_length_234_cov_9.633166_g1789_i0", "PRJEB8827", "1810", "234", "9.633166", "22.54160844", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "322", "1.45e-83", "", "NTclustered", "gi|2104546236|gb|MZ344733.1|", "11676", "g1789", "i0", "91.453", "100.303418803419", "234", "20", "100", "0", "1", "234", "332", "99", "HIV-1 strain CITN_003_C04D01_EM10_7 from USA envelope glycoprotein (env) gene, partial cds", "blastn", "23471", "322", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25666185, "PRJEB8827g_S_NODE_1986_length_225_cov_4.842105_g1965_i0", "PRJEB8827", "1986", "225", "4.842105", "10.89473625", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "296", "8.37e-76", "", "NTclustered", "gi|1009520724|gb|KU685592.1|", "11676", "g1965", "i0", "90.393", "98.4711111111111", "229", "16", "99", "1", "3", "225", "513", "741", "HIV-1 isolate EUR-0033 from Spain gag protein (gag) gene, complete cds; pol protein (pol) gene, partial cds; and vif protein (vif), vpr protein (vpr), tat protein (tat), rev protein (rev), vpu protein (vpu), envelope glycoprotein (env), and nef protein (nef) genes, complete cds", "blastn", "22156", "296", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25666187, "PRJEB8827g_S_NODE_2034_length_223_cov_19.063830_g2013_i0", "PRJEB8827", "2034", "223", "19.06383", "42.5123409", "Human immunodeficiency virus", "12721", "Viruses", "Viruses", "315", "2.29e-81", "", "NTclustered", "gi|564474690|gb|KC595160.1|", "12721", "g2013", "i0", "92.07", "102.273542600897", "227", "13", "100", "5", "1", "223", "274", "499", "Human immunodeficiency virus isolate 3227050_2Fc1 envelope glycoprotein (env) gene, complete cds", "blastn", "22807", "315", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Human immunodeficiency virus"], [25666188, "PRJEB8827g_S_NODE_2090_length_221_cov_3.145161_g2069_i0", "PRJEB8827", "2090", "221", "3.145161", "6.95080581", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "320", "4.86e-83", "", "NTclustered", "gi|38491800|gb|AY371156.1|", "11676", "g2069", "i0", "92.76", "100.570135746606", "221", "16", "100", "0", "1", "221", "5198", "5418", "HIV-1 isolate 01CM.0175BA from Cameroon gag protein (gag) and pol protein (pol) genes, partial cds; vif protein (vif), vpr protein (vpr), tat protein (tat), rev protein (rev), vpu protein (vpu), and envelope glycoprotein (env) genes, complete cds; and nef protein (nef) gene, partial cds", "blastn", "22226", "320", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25666190, "PRJEB8827g_S_NODE_218_length_509_cov_10.848101_g202_i0", "PRJEB8827", "218", "509", "10.848101", "55.21683409", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "555", "3.109999999999999e-153", "", "NTclustered", "gi|1036307246|gb|KX168073.1|", "11676", "g202", "i0", "86.68", "102.080550098232", "518", "48", "100", "15", "1", "509", "656", "151", "HIV-1 isolate MF520.W14M.C2 from Kenya envelope glycoprotein (env) gene, complete cds", "blastn", "51959", "555", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25666199, "PRJEB8827g_S_NODE_2450_length_209_cov_9.660920_g2429_i0", "PRJEB8827", "2450", "209", "9.66092", "20.1913228", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "331", "2.1e-86", "", "NTclustered", "gi|310877667|gb|HQ110664.1|", "11676", "g2429", "i0", "95.215", "99.9473684210526", "209", "10", "100", "0", "1", "209", "1056", "848", "HIV-1 clone 1989b2 from USA envelope glycoprotein (env) gene, complete cds", "blastn", "20889", "331", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25666200, "PRJEB8827g_S_NODE_2714_length_203_cov_8.625000_g2693_i0", "PRJEB8827", "2714", "203", "8.625", "17.50875", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "348", "2.0100000000000006e-91", "", "NTclustered", "gi|1351110378|gb|MG756523.1|", "11676", "g2693", "i0", "97.537", "100.12807881773401", "203", "5", "100", "0", "1", "203", "635", "433", "HIV-1 isolate B_CH-2015_MP035_BLOOD_X3_C97_S0014_C0022 nonfunctional envelope glycoprotein (env) gene, partial sequence", "blastn", "20326", "348", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25666209, "PRJEB8827g_S_NODE_338_length_429_cov_6.802030_g319_i0", "PRJEB8827", "338", "429", "6.80203", "29.1807087", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "545", "1.56e-150", "", "NTclustered", "gi|300510728|gb|GU471633.1|", "11676", "g319", "i0", "95.087", "91.9020979020979", "346", "17", "81", "0", "65", "410", "346", "1", "HIV-1 isolate C4-09 from Switzerland envelope glycoprotein (env) gene, partial cds", "blastn", "39426", "545", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25666210, "PRJEB8827g_S_NODE_354_length_425_cov_21.397436_g335_i0", "PRJEB8827", "354", "425", "21.397436", "90.939103", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "713", "0", "", "NTclustered", "gi|1732595154|gb|MK548808.1|", "11676", "g335", "i0", "96.941", "99.4470588235294", "425", "13", "100", "0", "1", "425", "1107", "1531", "HIV-1 isolate 92CNS5-16662 from South Korea gag protein gene, complete cds", "blastn", "42265", "713", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25666213, "PRJEB8827g_S_NODE_3786_length_186_cov_1.139073_g3765_i0", "PRJEB8827", "3786", "186", "1.139073", "2.11867578", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "291", "3.1e-74", "", "NTclustered", "gi|56609023|gb|AY838748.1|", "11676", "g3765", "i0", "95.58", "98.3333333333333", "181", "8", "97", "0", "6", "186", "543", "363", "HIV-1 isolate 272M from South Africa nef protein (nef) gene, partial cds", "blastn", "18290", "291", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25666215, "PRJEB8827g_S_NODE_4218_length_182_cov_1.639456_g4197_i0", "PRJEB8827", "4218", "182", "1.639456", "2.98380992", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "276", "8.440000000000001e-70", "", "NTclustered", "gi|525645442|gb|KC807955.1|", "11676", "g4197", "i0", "94.413", "98.9175824175824", "179", "10", "98", "0", "3", "181", "2104", "2282", "HIV-1 isolate CNXJ09466 clone R3 from China envelope glycoprotein (env) gene, complete cds", "blastn", "18003", "276", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25666220, "PRJEB8827g_S_NODE_514_length_368_cov_51.216216_g493_i0", "PRJEB8827", "514", "368", "51.216216", "188.47567488", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "433", "1.0699999999999999e-116", "", "NTclustered", "gi|769793924|gb|KM082110.1|", "11676", "g493", "i0", "88.235", "100.766304347826", "374", "29", "100", "9", "1", "368", "1629", "1265", "HIV-1 isolate 1853DNAPBMC22JUN2011.P6M18 from USA vpu protein (vpu) and envelope glycoprotein (env) genes, complete cds", "blastn", "37082", "433", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25666222, "PRJEB8827g_S_NODE_570_length_354_cov_14.203762_g549_i0", "PRJEB8827", "570", "354", "14.203762", "50.28131748", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "399", "1.0399999999999998e-106", "", "NTclustered", "gi|83854080|gb|DQ313246.1|", "11676", "g549", "i0", "87.784", "102.169491525424", "352", "29", "99", "6", "4", "354", "612", "274", "HIV-1 strain MACS4(4/116) from USA envelope glycoprotein (env) gene, complete cds", "blastn", "36168", "399", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25666224, "PRJEB8827g_S_NODE_650_length_340_cov_5.924590_g629_i0", "PRJEB8827", "650", "340", "5.92459", "20.143606", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "540", "5.6199999999999996e-149", "", "NTclustered", "gi|114801551|gb|DQ854075.1|", "11676", "g629", "i0", "95.294", "100.105882352941", "340", "16", "100", "0", "1", "340", "425", "86", "HIV-1 isolate 14259.1 from USA vpr protein (vpr) gene, complete cds; and tat protein (tat) gene, partial cds", "blastn", "34036", "540", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25666225, "PRJEB8827g_S_NODE_6626_length_169_cov_6.574627_g6605_i0", "PRJEB8827", "6626", "169", "6.5746270000000004", "11.11111963", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "285", "1.28e-72", "", "NTclustered", "gi|1560001327|gb|MK169789.1|", "11676", "g6605", "i0", "97.041", "100", "169", "5", "100", "0", "1", "169", "846", "1014", "HIV-1 isolate 120-LN-69H4 from USA, partial genome", "blastn", "16900", "285", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25666229, "PRJEB8827g_S_NODE_7538_length_166_cov_2.396947_g7517_i0", "PRJEB8827", "7538", "166", "2.396947", "3.97893202", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "278", "2.11e-70", "", "NTclustered", "gi|353082556|gb|JF960074.1|", "11676", "g7517", "i0", "96.97", "99.9096385542169", "165", "5", "99", "0", "2", "166", "349", "185", "HIV-1 isolate ZPHI194-01 from Switzerland envelope glycoprotein (env) gene, partial cds", "blastn", "16585", "278", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25666238, "PRJEB8827g_S_NODE_8930_length_162_cov_2.188976_g8909_i0", "PRJEB8827", "8930", "162", "2.188976", "3.54614112", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "259", "7.400000000000001e-65", "", "NTclustered", "gi|1131387712|gb|KX907351.1|", "11676", "g8909", "i0", "95.652", "100", "161", "7", "99", "0", "2", "162", "5719", "5559", "HIV-1 isolate CO0778V2 from Tanzania, partial genome", "blastn", "16200", "259", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25666239, "PRJEB8827g_S_NODE_898_length_304_cov_4.368030_g877_i0", "PRJEB8827", "898", "304", "4.36803", "13.2788112", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "468", "2.37e-127", "", "NTclustered", "gi|294722089|gb|GQ433014.1|", "11676", "g877", "i0", "94.426", "100.5", "305", "16", "100", "1", "1", "304", "1244", "940", "HIV-1 clone CMNYU6544(12)22 from Cameroon pol protein (pol) gene, partial cds; vif protein (vif) and vpr protein (vpr) genes, complete cds; and tat protein (tat), rev protein (rev), vpu protein (vpu), and envelope glycoprotein (env) genes, partial cds", "blastn", "30552", "468", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25666241, "PRJEB8827g_S_NODE_922_length_301_cov_28.255639_g901_i0", "PRJEB8827", "922", "301", "28.255639", "85.04947339", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "484", "2.3299999999999996e-132", "", "NTclustered", "gi|407732745|gb|JX446812.1|", "11676", "g901", "i0", "95.681", "99.9601328903654", "301", "13", "100", "0", "1", "301", "990", "690", "HIV-1 isolate AA011a02L from Thailand gag protein (gag) gene, complete cds; pol protein (pol) gene, partial cds; and vif protein (vif) and vpr protein (vpr) genes, complete cds", "blastn", "30088", "484", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25666243, "PRJEB8827h_S_NODE_1050_length_289_cov_3.653543_g1031_i0", "PRJEB8827", "1050", "289", "3.653543", "10.55873927", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "405", "1.78e-108", "", "NTclustered", "gi|339642282|gb|HQ657530.1|", "11676", "g1031", "i0", "92.096", "100.342560553633", "291", "18", "99", "3", "1", "287", "311", "22", "HIV-1 isolate 22271 from Taiwan envelope glycoprotein (env) gene, partial cds", "blastn", "28999", "405", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25666245, "PRJEB8827h_S_NODE_114_length_549_cov_5.035019_g96_i0", "PRJEB8827", "114", "549", "5.035019", "27.64225431", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "815", "0", "", "NTclustered", "gi|255739164|gb|FJ606180.1|", "11676", "g96", "i0", "93.443", "99.896174863388", "549", "36", "100", "0", "1", "549", "1296", "748", "HIV-1 isolate ZM132F from Zambia gag protein (gag) gene, complete cds", "blastn", "54843", "815", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25666252, "PRJEB8827h_S_NODE_1322_length_266_cov_20.017316_g1303_i0", "PRJEB8827", "1322", "266", "20.017316", "53.24606056", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "416", "7.489999999999999e-112", "", "NTclustered", "gi|316937987|gb|GU329415.1|", "11676", "g1303", "i0", "94.796", "100.860902255639", "269", "11", "100", "3", "1", "266", "1061", "793", "HIV-1 isolate 1 from Zambia envelope glycoprotein (env) gene, complete cds", "blastn", "26829", "416", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25666256, "PRJEB8827h_S_NODE_13618_length_187_cov_2.717105_g13599_i0", "PRJEB8827", "13618", "187", "2.717105", "5.08098635", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "248", "1.9e-61", "", "NTclustered", "gi|56199259|gb|AY621432.1|", "11676", "g13599", "i0", "90.426", "100.577540106952", "188", "16", "100", "2", "1", "187", "321", "135", "HIV-1 isolate M6 envelope glycoprotein (env) gene, partial cds", "blastn", "18808", "248", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25666272, "PRJEB8827h_S_NODE_2306_length_225_cov_6.357895_g2287_i0", "PRJEB8827", "2306", "225", "6.357895", "14.30526375", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "250", "6.6099999999999996e-62", "", "NTclustered", "gi|316937827|gb|GU329329.1|", "11676", "g2287", "i0", "88.095", "93.7511111111111", "210", "25", "93", "0", "3", "212", "576", "785", "HIV-1 isolate 48 from Zambia envelope glycoprotein (env) gene, complete cds", "blastn", "21094", "250", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25666273, "PRJEB8827h_S_NODE_2362_length_224_cov_1.973545_g2343_i0", "PRJEB8827", "2362", "224", "1.973545", "4.4207408", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "265", "2.35e-66", "", "NTclustered", "gi|163637173|gb|EU272216.1|", "11676", "g2343", "i0", "90.863", "89.5758928571429", "197", "18", "88", "0", "28", "224", "379", "183", "HIV-1 clone 1006 from China envelope glycoprotein (env) gene, partial cds", "blastn", "20065", "265", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25666279, "PRJEB8827h_S_NODE_2626_length_219_cov_16.673913_g2607_i0", "PRJEB8827", "2626", "219", "16.673913", "36.51586947", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "279", "8.16e-71", "", "NTclustered", "gi|339718095|gb|JN108092.1|", "11676", "g2607", "i0", "90", "101.077625570776", "220", "17", "100", "5", "1", "219", "913", "698", "HIV-1 isolate 1468MD3_MW_C_02 from Malawi envelope glycoprotein (env) gene, partial cds", "blastn", "22136", "279", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25666284, "PRJEB8827h_S_NODE_27850_length_177_cov_1.401408_g27831_i0", "PRJEB8827", "27850", "177", "1.401408", "2.48049216", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "207", "3.02e-49", "", "NTclustered", "gi|80971977|gb|DQ187024.1|", "11676", "g27831", "i0", "87.64", "99.593220338983", "178", "20", "100", "2", "1", "177", "1", "177", "HIV-1 isolate MB201.P32M.E13.v1v2 from Kenya envelope glycoprotein (env) gene, partial cds", "blastn", "17628", "207", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25666287, "PRJEB8827h_S_NODE_2946_length_215_cov_2.772222_g2927_i0", "PRJEB8827", "2946", "215", "2.772222", "5.9602772999999996", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "359", "9.969999999999999e-95", "", "NTclustered", "gi|354720631|gb|JF680931.1|", "11676", "g2927", "i0", "98.058", "97.5906976744186", "206", "4", "96", "0", "1", "206", "1469", "1264", "HIV-1 isolate P430.p3 nonfunctional env protein (env) gene, complete sequence; and vpu protein (vpu), rev protein (rev), and tat protein (tat) genes, partial cds", "blastn", "20982", "359", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25666303, "PRJEB8827h_S_NODE_40250_length_165_cov_2.346154_g40231_i0", "PRJEB8827", "40250", "165", "2.346154", "3.8711541", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "270", "3.4999999999999993e-68", "", "NTclustered", "gi|13569287|gb|AF286231.1|AF286231", "11676", "g40231", "i0", "96.341", "99.2424242424242", "164", "6", "99", "0", "2", "165", "4642", "4479", "HIV-1 strain 98IN012 from India, complete genome", "blastn", "16375", "270", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25666304, "PRJEB8827h_S_NODE_40266_length_165_cov_1.184615_g40247_i0", "PRJEB8827", "40266", "165", "1.184615", "1.95461475", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "276", "7.52e-70", "", "NTclustered", "gi|846121800|gb|KR861263.1|", "11676", "g40247", "i0", "96.97", "99.9636363636364", "165", "4", "100", "1", "1", "165", "233", "70", "HIV-1 isolate bcpp_00069_amp2 from Botswana tat protein (tat) gene, partial cds; truncated rev protein (rev) and vpu protein (vpu) genes, complete cds; nonfunctional envelope glycoprotein (env) gene, complete sequence; and truncated envelope glycoprotein (vpu) and truncated nef protein (nef) genes, complete cds", "blastn", "16494", "276", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25666310, "PRJEB8827h_S_NODE_42802_length_160_cov_18.120000_g42783_i0", "PRJEB8827", "42802", "160", "18.12", "28.992", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "174", "2.71e-39", "", "NTclustered", "gi|396076501|gb|JX239391.1|", "11676", "g42783", "i0", "86.42", "102.24375", "162", "18", "100", "4", "1", "160", "1118", "1277", "HIV-1 isolate ZM282M_12APR06_PL1 from Zambia envelope glycoprotein (env) gene, complete cds; and vpu protein (vpu), rev protein (rev), and tat protein (tat) genes, partial cds", "blastn", "16359", "174", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25666327, "PRJEB8827h_S_NODE_49930_length_152_cov_6.974359_g49911_i0", "PRJEB8827", "49930", "152", "6.974359", "10.60102568", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "161", "1.98e-35", "", "NTclustered", "gi|2165743884|gb|OK513965.1|", "11676", "g49911", "i0", "95.098", "69.7039473684211", "102", "5", "67", "0", "2", "103", "1604", "1503", "HIV-1 isolate 111B from Uganda envelope glycoprotein (env) gene, partial cds", "blastn", "10595", "161", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25666333, "PRJEB8827h_S_NODE_53538_length_150_cov_1.086957_g53519_i0", "PRJEB8827", "53538", "150", "1.086957", "1.6304355", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "261", "1.86e-65", "", "NTclustered", "gi|2599479467|gb|OR582087.1|", "11676", "g53519", "i0", "98", "96.5933333333333", "150", "3", "100", "0", "1", "150", "1406", "1257", "HIV-1 isolate GRT144 from Switzerland pol protein (pol) gene, partial cds", "blastn", "14489", "261", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25666336, "PRJEB8827h_S_NODE_626_length_342_cov_39.133550_g607_i0", "PRJEB8827", "626", "342", "39.13355", "133.836741", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "381", "3.629999999999999e-101", "", "NTclustered", "gi|325966672|gb|HM070659.1|", "11676", "g607", "i0", "86.969", "101.324561403509", "353", "29", "99", "12", "1", "340", "1151", "1499", "HIV-1 isolate 3902bmL_F2 from Malawi envelope glycoprotein (env) gene, complete cds; and vpu protein (vpu), rev protein (rev), and tat protein (tat) genes, partial cds", "blastn", "34653", "381", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25666341, "PRJEB8827h_S_NODE_818_length_315_cov_7.110714_g799_i0", "PRJEB8827", "818", "315", "7.110714", "22.3987491", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "499", "8.76e-137", "", "NTclustered", "gi|334190632|gb|JF722874.1|", "11676", "g799", "i0", "95.238", "99.8126984126984", "315", "15", "100", "0", "1", "315", "632", "946", "HIV-1 isolate 1702M_04 from Malawi envelope glycoprotein (env) and vpu protein (vpu) genes, partial cds", "blastn", "31441", "499", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25666345, "PRJEB8827h_S_NODE_922_length_300_cov_12.475472_g903_i0", "PRJEB8827", "922", "300", "12.475472", "37.426416", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "357", "5.28e-94", "", "NTclustered", "gi|2250211769|gb|ON157031.1|", "11676", "g903", "i0", "89.347", "99.6933333333333", "291", "22", "97", "4", "10", "300", "1599", "1318", "HIV-1 isolate in1813-1 from China envelope glycoprotein (env) gene, complete cds; and vpu protein (vpu), rev protein (rev), and tat protein (tat) genes, partial cds", "blastn", "29908", "357", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25753824, "PRJEB8827d_S_NODE_410_length_285_cov_5034.676000_g406_i0", "PRJEB8827", "410", "285", "5034.676", "14348.8266", "Viruses", "10239", "Viruses", "Viruses", "108", "5.54e-19", "", "NTclustered", "gi|2859928216|gb|PQ511684.1|", "11676", "g406", "i0", "98.361", "22.5719298245614", "61", "1", "21", "0", "225", "285", "9468", "9528", "HIV-1 isolate GB1LV100191 from USA, complete genome", "blastn", "6433", "108", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25754029, "PRJEB8827g_S_NODE_2962_length_198_cov_2.539877_g2941_i0", "PRJEB8827", "2962", "198", "2.539877", "5.02895646", "Lentivirus", "11646", "Viruses", "Viruses", "327", "2.55e-85", "", "NTclustered", "gi|14289982|gb|AF377954.1|", "11676", "g2941", "i0", "96.465", "99.9848484848485", "198", "7", "100", "0", "1", "198", "4774", "4577", "HIV-1 isolate CM52885 from Cameroon gag protein (gag) and pol protein (pol) genes, partial cds; and vif protein (vif), vpr protein (vpr), tat protein (tat), rev protein (rev), vpu protein (vpu), envelope glycoprotein (env), and nef protein (nef) genes, complete cds", "blastn", "19797", "327", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [25802306, "PRJEB8827g_S_NODE_10267_length_159_cov_3.145161_g10246_i0", "PRJEB8827", "10267", "159", "3.145161", "5.00080599", "Human immunodeficiency virus 1", "11676", "Viruses", "Viruses", "222", "9.479999999999999e-54", "", "NTclustered", "gi|157778984|gb|EU023924.1|", "11676", "g10246", "i0", "94.444", "93.5094339622642", "144", "8", "91", "0", "16", "159", "567", "424", "HIV-1 isolate NAB6pre-cl_8 from Switzerland vpu protein (vpu) gene, complete cds; and envelope glycoprotein (env) gene, partial cds", "blastn", "14868", "222", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"]], "truncated": false, "filtered_table_rows_count": 378, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_kingdom\" = :p2 order by rowid limit 101", "params": {"p0": "blastn", "p1": "PRJEB8827", "p2": "Pararnavirae"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJEB8827&tax_kingdom=Pararnavirae", "results": [{"value": "PRJEB8827", "label": "PRJEB8827", "count": 378, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&tax_kingdom=Pararnavirae", "selected": 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