{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"blastn\", bioproject = \"PRJEB12982\" and tax_kingdom = \"Pararnavirae\"", "rows": [[20863, "PRJEB12982_P_NODE_11921_length_204_cov_0.890323_g11758_i0", "PRJEB12982", "11921", "204", "0.890323", "1.81625892", "Lentivirus humimdef1", "3418650", "Viruses", "Viruses", "305", "1.24e-78", "", "NTclustered", "gi|1798179464|gb|MN694982.1|", "11676", "g11758", "i0", "93.627", "94.8725490196078", "204", "13", "100", "0", "1", "204", "1114", "1317", "HIV-1 isolate C115329 from Uganda gag protein (gag) gene, complete cds; pol protein (pol) gene, partial cds; vif protein (vif) and vpr protein (vpr) genes, complete cds; tat protein (tat) and rev protein (rev) genes, partial cds; vpu protein (vpu) gene, complete cds; and envelope glycoprotein (env) gene, partial cds", "blastn", "19354", "305", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", 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"i0", "98.182", "97.2710843373494", "165", "3", "99", "0", "1", "165", "429", "265", "HIV-1 isolate 01SPLP5 gag protein gene, partial cds", "blastn", "16147", "289", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [8947920, "PRJEB12982_P_NODE_17808_length_166_cov_0.871795_g17645_i0", "PRJEB12982", "17808", "166", "0.871795", "1.4471797", "Lentivirus humimdef1", "3418650", "Viruses", "Viruses", "268", "1.27e-67", "", "NTclustered", "gi|86560173|gb|DQ354115.1|", "11676", "g17645", "i0", "95.783", "99.7710843373494", "166", "7", "100", "0", "1", "166", "5512", "5347", "HIV-1 isolate M005 subtype CRF01_AE/B from Thailand gag protein (gag) and pol protein (pol) genes, partial cds; and vif protein (vif), vpr protein (vpr), tat protein (tat), rev protein (rev), vpu protein (vpu), envelope glycoprotein (env), and nef protein (nef) genes, complete cds", "blastn", "16562", "268", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [10223689, "PRJEB12982_P_NODE_17449_length_166_cov_1.102564_g17286_i0", "PRJEB12982", "17449", "166", "1.102564", "1.83025624", "Lentivirus humimdef1", "3418650", "Viruses", "Viruses", "263", "5.9e-66", "", "NTclustered", "gi|24753971|gb|AF538304.1|", "11676", "g17286", "i0", "95.181", "92.6204819277108", "166", "8", "100", "0", "1", "166", "6955", "6790", "HIV-1 clone C24 from Australia gag protein (gag) gene, complete cds; pol protein (pol) gene, partial cds; and vif protein (vif), vpr protein (vpr), tat protein (tat), rev protein (rev), vpu protein (vpu), envelope glycoprotein (env), and nef protein (nef) genes, complete cds", "blastn", "15375", "263", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [11498852, 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complete genome", "blastn", "18754", "274", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [15323054, "PRJEB12982_P_NODE_13193_length_193_cov_0.951389_g13030_i0", "PRJEB12982", "13193", "193", "0.951389", "1.83618077", "Lentivirus humimdef1", "3418650", "Viruses", "Viruses", "302", "1.5e-77", "", "NTclustered", "gi|2567180131|gb|OR246644.1|", "11676", "g13030", "i0", "94.819", "100", "193", "10", "100", "0", "1", "193", "5553", "5745", "HIV-1 isolate MRC004_Cluster26_size-14_count-3 from Belgium defective genome", "blastn", "19300", "302", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [15323223, "PRJEB12982_P_NODE_7233_length_270_cov_1.022624_g7070_i0", "PRJEB12982", "7233", "270", "1.022624", "2.7610848", "Lentivirus humimdef1", "3418650", "Viruses", "Viruses", "374", "4.6499999999999986e-99", "", "NTclustered", "gi|1061889441|gb|KX693154.1|", "11676", "g7070", "i0", "91.575", "101.011111111111", "273", "20", "100", "3", "1", "270", "747", "1019", "HIV-1 isolate 2358-0-13 from China envelope glycoprotein (env) gene, complete cds", "blastn", "27273", "374", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [16597745, "PRJEB12982_P_NODE_17174_length_167_cov_0.864407_g17011_i0", "PRJEB12982", "17174", "167", "0.864407", "1.44355969", "Lentivirus humimdef1", "3418650", "Viruses", "Viruses", "196", "6.12e-46", "", "NTclustered", "gi|1311871712|gb|MF988861.1|", "11676", "g17011", "i0", "90.066", "91.3892215568862", "151", "15", "90", "0", "17", "167", "176", "26", "HIV-1 isolate H4_1_18 from Spain envelope glycoprotein (env) gene, partial cds", "blastn", "15262", "196", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [17872627, "PRJEB12982_P_NODE_21195_length_161_cov_0.910714_g21032_i0", "PRJEB12982", "21195", "161", "0.910714", "1.46624954", "Lentivirus humimdef1", "3418650", "Viruses", "Viruses", "276", "7.29e-70", "", "NTclustered", "gi|1041501128|gb|KX129489.1|", "11676", "g21032", "i0", "97.516", "100", "161", "4", "100", "0", "1", "161", "1957", "2117", "HIV-1 isolate IC.790.L.E5 from USA envelope glycoprotein (env) gene, partial cds", "blastn", "16100", "276", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [20421561, "PRJEB12982_P_NODE_15757_length_174_cov_0.864000_g15594_i0", "PRJEB12982", "15757", "174", "0.864", "1.50336", "Lentivirus humimdef1", "3418650", "Viruses", "Viruses", "252", "1.34e-62", "", "NTclustered", "gi|508083149|gb|KC699001.1|", "11676", "g15594", "i0", "93.491", "93.1724137931034", "169", "11", "97", "0", "6", "174", "176", "8", "HIV-1 isolate 1644 from France envelope glycoprotein (env) gene, complete cds", "blastn", "16212", "252", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [21387820, "PRJEB12982_P_NODE_17577_length_166_cov_0.871795_g17414_i0", "PRJEB12982", "17577", "166", "0.871795", "1.4471797", "Lentivirus", "11646", "Viruses", "Viruses", "292", "7.52e-75", "", "NTclustered", "gi|63097046|gb|AY901572.1|", "11676", "g17414", "i0", "98.193", "99.9638554216867", "166", "3", "100", "0", "1", "166", "201", "36", "HIV-1 isolate 954 protease (pol) gene, partial cds", "blastn", "16594", "292", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"], [22973063, "PRJEB12982_P_NODE_9899_length_225_cov_0.926136_g9736_i0", "PRJEB12982", "9899", "225", "0.926136", "2.083806", "Lentivirus humimdef1", "3418650", "Viruses", "Viruses", "388", "1.34e-103", "", "NTclustered", "gi|1243362010|gb|MF356742.1|", "11676", "g9736", "i0", "97.778", "99.1644444444444", "225", "5", "100", "0", "1", "225", "953", "1177", "HIV-1 isolate A585_clon1 from Argentina gag protein (gag) gene, partial cds", "blastn", "22312", "388", "1", "Viruses", null, "Pararnavirae", "Artverviricota", "Revtraviricetes", "Ortervirales", "Retroviridae", "Lentivirus", "Lentivirus humimdef1"]], "truncated": false, "filtered_table_rows_count": 20, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_kingdom\" = :p2 order by rowid limit 101", "params": {"p0": "blastn", "p1": "PRJEB12982", "p2": "Pararnavirae"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": 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20, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJEB12982&tax_kingdom=Pararnavirae&tax_superkingdom=Viruses", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJEB12982&tax_kingdom=Pararnavirae", "results": [], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJEB12982&tax_kingdom=Pararnavirae", "results": [{"value": "Pararnavirae", "label": "Pararnavirae", "count": 20, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJEB12982", "selected": true}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJEB12982&tax_kingdom=Pararnavirae", "results": [{"value": "Artverviricota", "label": "Artverviricota", "count": 20, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJEB12982&tax_kingdom=Pararnavirae&tax_phylum=Artverviricota", "selected": false}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 181.48719600139884}