{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"blastn\", bioproject = \"PRJEB12296\" and tax_clade = \"Amoebozoa\"", "rows": [[1294947, "PRJEB12296_P_NODE_382_length_217_cov_2.861702_g369_i0", "PRJEB12296", "382", "217", "2.861702", "6.20989334", "Vermamoeba vermiformis", "5778", "Tubulinea", "other_Eukaryota", "185", "1.81e-42", "", "NTclustered", "gi|909719645|gb|KT185625.1|", "5778", "g369", "i0", "93.548", "110.470046082949", "124", "8", "80", "0", "71", "194", "6376", "6253", "Vermamoeba vermiformis isolate 1 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence", "blastn", "23972", "185", "1", "Eukaryota", "Amoebozoa", null, "Tubulinea", "Echinamoebida", null, null, "Vermamoeba", "Vermamoeba vermiformis"], [25500744, "PRJEB12296_S_NODE_3217_length_249_cov_2.612150_g3185_i0", "PRJEB12296", "3217", "249", "2.61215", "6.5042535", "uncultured Amoebozoa", "590481", "Root_unresolved", "Root_unresolved", "339", "1.5399999999999998e-88", "", "NTclustered", "gi|221185864|gb|FJ577811.1|", "590481", "g3185", "i0", "94.248", "21.425702811245", "226", "6", "88", "6", "28", "247", "717", "941", "Uncultured Amoebozoa clone Ivry07 18S ribosomal RNA gene, partial sequence", "blastn", "5335", "339", "1", "Eukaryota", "Amoebozoa", null, null, null, null, null, null, "uncultured Amoebozoa"], [25500814, "PRJEB12296_S_NODE_585_length_430_cov_484.187342_g555_i0", "PRJEB12296", "585", "430", "484.187342", "2082.0055706", "Protostelium mycophagum", "472931", "Evosea", "other_Eukaryota", "87.9", "1.14e-12", "", "NTclustered", "gi|262262904|gb|FJ766447.1|", "472931", "g555", "i0", "80.702", "13.9116279069767", "114", "20", "27", "2", "312", "425", "1298", "1187", "Protostelium mycophagum strain HI06-7A-1 small subunit ribosomal RNA gene, partial sequence", "blastn", "5982", "87.9", "1", "Eukaryota", "Amoebozoa", null, "Evosea", "Variosea", "Protosteliida", "Protosteliaceae", "Protostelium", "Protostelium mycophagum"], [25500855, "PRJEB12296_S_NODE_8113_length_182_cov_2.102041_g8081_i0", "PRJEB12296", "8113", "182", "2.102041", "3.82571462", "Ripella sp. 8", "1973050", "Discosea", "other_Eukaryota", "235", "1.43e-57", "", "NTclustered", "gi|399764202|gb|JQ271713.1|", "1217113", "g8081", "i0", "98.496", "57.3516483516484", "133", "2", "73", "0", "1", "133", "170", "38", "Ripella sp. 805 18S ribosomal RNA gene, partial sequence", "blastn", "10438", "235", "1", "Eukaryota", "Amoebozoa", null, "Discosea", "Flabellinia", null, "Vannellidae", "Ripella", "Ripella sp. 805"], [25606819, "PRJEB12296_S_NODE_1609_length_317_cov_9.170213_g1577_i0", "PRJEB12296", "1609", "317", "9.170213", "29.06957521", "Vermistella", "354201", "Discosea", "other_Eukaryota", "100", "1.05e-16", "", "NTclustered", "gi|766943132|gb|KJ874207.1|", "1628650", "g1577", "i0", "90.667", "25.9116719242902", "75", "7", "24", "0", "1", "75", "1596", "1522", "Vermistella sp. TT-2015a strain SV198 clone 1 18S ribosomal RNA gene, partial sequence", "blastn", "8214", "100", "1", "Eukaryota", "Amoebozoa", null, "Discosea", null, "Stygamoebida", null, "Vermistella", "Vermistella arctica"], [25636587, "PRJEB12296_S_NODE_3834_length_233_cov_2.348485_g3802_i0", "PRJEB12296", "3834", "233", "2.348485", "5.47197005", "Cochliopodium larifeili", "1017091", "Discosea", "other_Eukaryota", "383", "6.51e-102", "", "NTclustered", "gi|330902855|gb|JF298253.1|", "1017091", "g3802", "i0", "99.524", "60.725321888412", "210", "1", "90", "0", "1", "210", "643", "434", "Cochliopodium larifeili clone 901 18S ribosomal RNA gene, partial sequence", "blastn", "14149", "383", "1", "Eukaryota", "Amoebozoa", null, "Discosea", null, "Himatismenida", "Cochliopodiidae", "Cochliopodium", "Cochliopodium larifeili"], [25636723, "PRJEB12296_S_NODE_986_length_367_cov_3.228916_g954_i0", "PRJEB12296", "986", "367", "3.228916", "11.85012172", "Cryptodifflugia operculata", "1078836", "Tubulinea", "other_Eukaryota", "612", "1.2699999999999999e-170", "", "NTclustered", "gi|2651357777|gb|PP174294.1|", "1078836", "g954", "i0", "96.73", "67.6839237057221", "367", "12", "100", "0", "1", "367", "2290", "2656", "Cryptodifflugia operculata isolate 75 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence", "blastn", "24840", "612", "1", "Eukaryota", "Amoebozoa", null, "Tubulinea", "Elardia", "Arcellinida", "Cryptodifflugiidae", "Cryptodifflugia", "Cryptodifflugia operculata"], [25772744, "PRJEB12296_S_NODE_2763_length_264_cov_278.336245_g2731_i0", "PRJEB12296", "2763", "264", "278.336245", "734.8076868", "Thecamoeba similis", "242545", "Discosea", "other_Eukaryota", "243", "1.33e-59", "", "NTclustered", "gi|33946350|gb|AY294154.1|", "242545", "g2731", "i0", "89.286", "72.5909090909091", "196", "18", "73", "3", "40", "233", "972", "1166", "Thecamoeba similis actin mRNA, complete cds", "blastn", "19164", "243", "1", "Eukaryota", "Amoebozoa", null, "Discosea", null, "Longamoebia", "Thecamoebida", "Thecamoeba", "Thecamoeba similis"], [25772863, "PRJEB12296_S_NODE_7403_length_187_cov_1.921053_g7371_i0", "PRJEB12296", "7403", "187", "1.921053", "3.59236911", "Cryptodifflugia operculata", "1078836", "Tubulinea", "other_Eukaryota", "279", "6.74e-71", "", "NTclustered", "gi|2651357777|gb|PP174294.1|", "1078836", "g7371", "i0", "96.45", "54.620320855615", "169", "6", "90", "0", "1", "169", "4231", "4399", "Cryptodifflugia operculata isolate 75 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence", "blastn", "10214", "279", "1", "Eukaryota", "Amoebozoa", null, "Tubulinea", "Elardia", "Arcellinida", "Cryptodifflugiidae", "Cryptodifflugia", "Cryptodifflugia operculata"], [25878811, "PRJEB12296_S_NODE_1963_length_297_cov_87.240458_g1931_i0", "PRJEB12296", "1963", "297", "87.240458", "259.10416026", "Eukaryota", "2759", "unresolved_Eukaryota", "other_Eukaryota", "486", "6.379999999999998e-133", "", "NTclustered", "gi|300078496|gb|GU001158.1|", "5778", "g1931", "i0", "98.545", "34.4478114478114", "275", "4", "93", "0", "22", "296", "1220", "946", "Hartmannella vermiformis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence", "blastn", "10231", "486", "1", "Eukaryota", "Amoebozoa", null, "Tubulinea", "Echinamoebida", null, null, "Vermamoeba", "Vermamoeba vermiformis"], [25908905, "PRJEB12296_S_NODE_2500_length_274_cov_1.820084_g2468_i0", "PRJEB12296", "2500", "274", "1.820084", "4.98703016", "Vannella septentrionalis", "197531", "Discosea", "other_Eukaryota", "466", "7.58e-127", "", "NTclustered", "gi|300078499|gb|GU001161.1|", "197531", "g2468", "i0", "98.485", "35.985401459854", "264", "4", "96", "0", "1", "264", "871", "1134", "Vannella septentrionalis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence", "blastn", "9860", "466", "1", "Eukaryota", "Amoebozoa", null, "Discosea", "Flabellinia", null, "Vannellidae", "Vannella", "Vannella septentrionalis"], [25908944, "PRJEB12296_S_NODE_3820_length_233_cov_8.156566_g3788_i0", "PRJEB12296", "3820", "233", "8.156566", "19.00479878", "Copromyxa sp. PKD 2", "3118317", "Tubulinea", "other_Eukaryota", "431", "2.2899999999999996e-116", "", "NTclustered", "gi|399764168|gb|JQ271679.1|", "1215977", "g3788", "i0", "100", "63.7081545064378", "233", "0", "100", "0", "1", "233", "411", "179", "Copromyxa sp. PKD 2011 strain ZEB4 18S ribosomal RNA gene, partial sequence", "blastn", "14844", "431", "1", "Eukaryota", "Amoebozoa", null, "Tubulinea", "Elardia", "Euamoebida", "Hartmannellidae", "Copromyxa", "Copromyxa sp. PKD 2011"], [26151257, "PRJEB12296_S_NODE_10205_length_172_cov_2.357664_g10173_i0", "PRJEB12296", "10205", "172", "2.357664", "4.05518208", "Vermamoeba", "1260114", "Tubulinea", "other_Eukaryota", "252", "1.33e-62", "", "NTclustered", "gi|909719645|gb|KT185625.1|", "5778", "g10173", "i0", "100", "62.2383720930233", "136", "0", "79", "0", "2", "137", "5265", "5400", "Vermamoeba vermiformis isolate 1 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence", "blastn", "10705", "252", "1", "Eukaryota", "Amoebozoa", null, "Tubulinea", "Echinamoebida", null, null, "Vermamoeba", "Vermamoeba vermiformis"], [26181257, "PRJEB12296_S_NODE_5582_length_204_cov_1.360947_g5550_i0", "PRJEB12296", "5582", "204", "1.360947", "2.77633188", "Cochliopodium larifeili", "1017091", "Discosea", "other_Eukaryota", "294", "2.68e-75", "", "NTclustered", "gi|330902855|gb|JF298253.1|", "1017091", "g5550", "i0", "92.683", "12.6617647058824", "205", "14", "100", "1", "1", "204", "654", "858", "Cochliopodium larifeili clone 901 18S ribosomal RNA gene, partial sequence", "blastn", "2583", "294", "1", "Eukaryota", "Amoebozoa", null, "Discosea", null, "Himatismenida", "Cochliopodiidae", "Cochliopodium", "Cochliopodium larifeili"], [26181328, "PRJEB12296_S_NODE_894_length_377_cov_3414.862573_g863_i0", "PRJEB12296", "894", "377", "3414.862573", "12874.03190021", "uncultured Amoebozoa", "590481", "Root_unresolved", "Root_unresolved", "292", "1.94e-74", "", "NTclustered", "gi|1569055459|gb|MK499381.1|", "590481", "g863", "i0", "84.983", "75.9787798408488", "293", "39", "77", "5", "1", "292", "561", "273", "Uncultured Amoebozoa clone KRN_S7s3 small subunit ribosomal RNA gene, partial sequence", "blastn", "28644", "292", "1", "Eukaryota", "Amoebozoa", null, null, null, null, null, null, "uncultured Amoebozoa"], [26316988, "PRJEB12296_S_NODE_5311_length_207_cov_7.726744_g5279_i0", "PRJEB12296", "5311", "207", "7.726744", "15.99436008", "Vermamoeba vermiformis", "5778", "Tubulinea", "other_Eukaryota", "377", "2.63e-100", "", "NTclustered", "gi|909719645|gb|KT185625.1|", "5778", "g5279", "i0", "99.517", "3.27536231884058", "207", "1", "100", "0", "1", "207", "6317", "6111", "Vermamoeba vermiformis isolate 1 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence", "blastn", "678", "377", "1", "Eukaryota", "Amoebozoa", null, "Tubulinea", "Echinamoebida", null, null, "Vermamoeba", "Vermamoeba vermiformis"], [26317022, "PRJEB12296_S_NODE_7231_length_188_cov_4.522876_g7199_i0", "PRJEB12296", "7231", "188", "4.522876", "8.50300688", "Acanthamoeba castellanii", "5755", "Discosea", "other_Eukaryota", "99", "2.04e-16", "", "NTclustered", "gi|300078498|gb|GU001160.1|", "5755", "g7199", "i0", "87.356", "1.61702127659574", "87", "10", "46", "1", "103", "188", "6888", "6802", "Acanthamoeba castellanii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence", "blastn", "304", "99", "1", "Eukaryota", "Amoebozoa", null, "Discosea", null, "Longamoebia", "Acanthamoebidae", "Acanthamoeba", "Acanthamoeba castellanii"], [26453071, "PRJEB12296_S_NODE_11208_length_168_cov_5.736842_g11176_i0", "PRJEB12296", "11208", "168", "5.736842", "9.63789456", "Protacanthamoeba bohemica", "325062", "Discosea", "other_Eukaryota", "198", "1.7099999999999997e-46", "", "NTclustered", "gi|2806326584|gb|PQ345834.1|", "325062", "g11176", "i0", "90.604", "36.1488095238095", "149", "14", "89", "0", "3", "151", "143", "291", "Protacanthamoeba bohemica isolate 6FSb1 small subunit ribosomal RNA gene, partial sequence", "blastn", "6073", "198", "1", "Eukaryota", "Amoebozoa", null, "Discosea", null, "Longamoebia", "Acanthamoebidae", "Protacanthamoeba", "Protacanthamoeba bohemica"], [26453106, "PRJEB12296_S_NODE_1440_length_328_cov_8.696246_g1408_i0", "PRJEB12296", "1440", "328", "8.696246", "28.52368688", "Protacanthamoeba bohemica", "325062", "Discosea", "other_Eukaryota", "446", "1.21e-120", "", "NTclustered", "gi|62825358|gb|AY960120.1|", "325062", "g1408", "i0", "91.541", "79.015243902439", "331", "16", "100", "7", "1", "328", "1118", "797", "Protacanthamoeba bohemica small subunit ribosomal RNA gene, complete sequence", "blastn", "25917", "446", "1", "Eukaryota", "Amoebozoa", null, "Discosea", null, "Longamoebia", "Acanthamoebidae", "Protacanthamoeba", "Protacanthamoeba bohemica"], [26453233, "PRJEB12296_S_NODE_4136_length_226_cov_3.722513_g4104_i0", "PRJEB12296", "4136", "226", "3.722513", "8.41287938", "Protacanthamoeba bohemica", "325062", "Discosea", "other_Eukaryota", "272", "1.42e-68", "", "NTclustered", "gi|2806326584|gb|PQ345834.1|", "325062", "g4104", "i0", "91.584", "65.8230088495575", "202", "10", "88", "6", "13", "211", "276", "473", "Protacanthamoeba bohemica isolate 6FSb1 small subunit ribosomal RNA gene, partial sequence", "blastn", "14876", "272", "1", "Eukaryota", "Amoebozoa", null, "Discosea", null, "Longamoebia", "Acanthamoebidae", "Protacanthamoeba", "Protacanthamoeba bohemica"]], "truncated": false, "filtered_table_rows_count": 20, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_clade\" = :p2 order by rowid limit 101", "params": {"p0": "blastn", "p1": "PRJEB12296", "p2": "Amoebozoa"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJEB12296&tax_clade=Amoebozoa", "results": [{"value": "PRJEB12296", "label": "PRJEB12296", "count": 20, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&tax_clade=Amoebozoa", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJEB12296&tax_clade=Amoebozoa", "results": [{"value": "blastn", "label": "blastn", "count": 20, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJEB12296&tax_clade=Amoebozoa", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJEB12296&tax_clade=Amoebozoa", "results": [{"value": "Eukaryota", "label": "Eukaryota", "count": 20, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJEB12296&tax_clade=Amoebozoa&tax_superkingdom=Eukaryota", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJEB12296&tax_clade=Amoebozoa", "results": [{"value": "Amoebozoa", "label": "Amoebozoa", "count": 20, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJEB12296", "selected": true}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJEB12296&tax_clade=Amoebozoa", "results": [], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJEB12296&tax_clade=Amoebozoa", "results": [{"value": "Discosea", "label": "Discosea", "count": 10, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJEB12296&tax_clade=Amoebozoa&tax_phylum=Discosea", "selected": false}, {"value": "Tubulinea", "label": "Tubulinea", "count": 7, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJEB12296&tax_clade=Amoebozoa&tax_phylum=Tubulinea", "selected": false}, {"value": "Evosea", "label": "Evosea", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=blastn&bioproject=PRJEB12296&tax_clade=Amoebozoa&tax_phylum=Evosea", "selected": false}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 118.67198099207599}